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The map label for this gene is 89885814

Identifier: 89885814

GI number: 89885814

Start: 92545

End: 93786

Strand: Reverse

Name: 89885814

Synonym: Rfer_4328

Alternate gene names: NA

Gene position: 93786-92545 (Counterclockwise)

Preceding gene: 89885815

Following gene: 89885812

Centisome position: 36.43

GC content: 57.17

Gene sequence:

>1242_bases
ATGAACTCGGAAATCGCGCGCTCTGATGGCTTTGATTTCCAGCTTCCGGCCGTAGGTCAGGGCAACGCCCCGATCTCAGC
GGATGCCCAGGCGATGGGGCAGTGGCTGGCGATTTACAAGCTGCGCAGTCCGAACACATTCAGAACCTATTTCAAGGAGG
GCAAGCGCTGGCTGGCGTGGCTCGAATTTCGACGTGGACCTACTCAGTCATCACACCTTCAAGTAGCTTCAGAAGACGAC
GTACAGACCTACCTTCTGGCCCTGGGCCGCCCGGAAGACAAGCGAGGCTCCGAGGACCAACCGTTCCAACCTACCGTCCT
TCCTGGGCACTTGCTGACCAAATATCGGCTGACCAGCCAGCCTTTCCTGAAAGAGCATCTTCCCCGTTCCATGGCGCATG
CGCTGTCTTCGGTTTCGGCGCTTTATACGTTTCTTGGCAAGTCCATCGATTCCGGGAGCGAAGCCTACGTCAGACACAAC
CCTACGTTGCGGTTGTCACGGCTAATGGACCACCGCGTCCACAAGGTATCGCGTCATTTTTCACCGCGCGTGTACGCCGA
AATGCTTGTGACCATCGAAATATCCAGACTCGAAGCCACAGACAAAGAGAAGTTGTTGCGAGCGGCCCGCCGGCGCTGGA
TCATTGTCATGCTCTACGGGTTATGGATCAGGCTGGCCGAGGCGTCGTCGATCAAGATGTCCTCCTTCAAGAAGCATCAC
AACATCTGGACCCTGACCGTCGTTGGGAAAGGCCGCAAAGAACGATCCTTCGAAGTAACCAGCGGTGTGATCATGGAGCT
GAGCCAATACCGGATGCATAACGAGCTGCCGTCCCTCCTTGCTGTCATGGAGGATCAGCCGGCTATTCTCCCGATCCGGC
CTGGCAAAGGCCGCACTCCGAACAAGCCTTGCACCTCGACTTCCATCTACCGCGAGGTCAAGCTCGTCGCAGAGGCCACC
GCCGCGCGCCTCGAGCGCGAAGGCACTGAACTTCCGCTGGACGAGCATGAACAACTGATTGAGAGCATCCGCAACATTTC
ACCGCACTGGTTCAGACACAGCGGTGCCTCTGAGGCCATCAATGCCGAGTACCCGATCAGGGATGCTGCCGACCGCTTGG
GCCACGCCAGCATCAACACCACTTCACAGATGTATCACCACGCTGATAATCGTAAAAGGCGCGATGCTCTCGAACGCATT
GAAGACAACCGCACCAAGGAACCCGGCGAGTTCTATCTCTGA

Upstream 100 bases:

>100_bases
AGTCAGAAGAAGCCGGGAAGACCGCGTTGGATGCAGACACGATTGCCGAAAAATTTCCGAACAAGCAGTTGCTTGACTTT
CTTGGCTCGGACAAAGCGCA

Downstream 100 bases:

>100_bases
GGACGGACTATCCAGTTAGCTCCGTTGTGCAGTGGGCAACTCTCAGTTGAAACCTGAATCTATCCATCGGCCATCAGACT
GCACGCGCGCTCGCCCAATG

Product: phage integrase

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Integrase/Recombinase Protein; Integrase/Recombinase; Phage Integrase Family Site Specific Recombinase; Integrase / Recombinase Protein; Site-Specific Tyrosine Integrase/Recombinase; Site-Specific Recombinase XerC; Phage Integrase Family; Tyrosine-Based Site-Specific Recombinase; Phage IntegrasePhage Integrase N-Terminal SAM-Like

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MNSEIARSDGFDFQLPAVGQGNAPISADAQAMGQWLAIYKLRSPNTFRTYFKEGKRWLAWLEFRRGPTQSSHLQVASEDD
VQTYLLALGRPEDKRGSEDQPFQPTVLPGHLLTKYRLTSQPFLKEHLPRSMAHALSSVSALYTFLGKSIDSGSEAYVRHN
PTLRLSRLMDHRVHKVSRHFSPRVYAEMLVTIEISRLEATDKEKLLRAARRRWIIVMLYGLWIRLAEASSIKMSSFKKHH
NIWTLTVVGKGRKERSFEVTSGVIMELSQYRMHNELPSLLAVMEDQPAILPIRPGKGRTPNKPCTSTSIYREVKLVAEAT
AARLEREGTELPLDEHEQLIESIRNISPHWFRHSGASEAINAEYPIRDAADRLGHASINTTSQMYHHADNRKRRDALERI
EDNRTKEPGEFYL

Sequences:

>Translated_413_residues
MNSEIARSDGFDFQLPAVGQGNAPISADAQAMGQWLAIYKLRSPNTFRTYFKEGKRWLAWLEFRRGPTQSSHLQVASEDD
VQTYLLALGRPEDKRGSEDQPFQPTVLPGHLLTKYRLTSQPFLKEHLPRSMAHALSSVSALYTFLGKSIDSGSEAYVRHN
PTLRLSRLMDHRVHKVSRHFSPRVYAEMLVTIEISRLEATDKEKLLRAARRRWIIVMLYGLWIRLAEASSIKMSSFKKHH
NIWTLTVVGKGRKERSFEVTSGVIMELSQYRMHNELPSLLAVMEDQPAILPIRPGKGRTPNKPCTSTSIYREVKLVAEAT
AARLEREGTELPLDEHEQLIESIRNISPHWFRHSGASEAINAEYPIRDAADRLGHASINTTSQMYHHADNRKRRDALERI
EDNRTKEPGEFYL
>Mature_413_residues
MNSEIARSDGFDFQLPAVGQGNAPISADAQAMGQWLAIYKLRSPNTFRTYFKEGKRWLAWLEFRRGPTQSSHLQVASEDD
VQTYLLALGRPEDKRGSEDQPFQPTVLPGHLLTKYRLTSQPFLKEHLPRSMAHALSSVSALYTFLGKSIDSGSEAYVRHN
PTLRLSRLMDHRVHKVSRHFSPRVYAEMLVTIEISRLEATDKEKLLRAARRRWIIVMLYGLWIRLAEASSIKMSSFKKHH
NIWTLTVVGKGRKERSFEVTSGVIMELSQYRMHNELPSLLAVMEDQPAILPIRPGKGRTPNKPCTSTSIYREVKLVAEAT
AARLEREGTELPLDEHEQLIESIRNISPHWFRHSGASEAINAEYPIRDAADRLGHASINTTSQMYHHADNRKRRDALERI
EDNRTKEPGEFYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47277; Mature: 47277

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSEIARSDGFDFQLPAVGQGNAPISADAQAMGQWLAIYKLRSPNTFRTYFKEGKRWLAW
CCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHH
LEFRRGPTQSSHLQVASEDDVQTYLLALGRPEDKRGSEDQPFQPTVLPGHLLTKYRLTSQ
HHHHCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
PFLKEHLPRSMAHALSSVSALYTFLGKSIDSGSEAYVRHNPTLRLSRLMDHRVHKVSRHF
CHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHC
SPRVYAEMLVTIEISRLEATDKEKLLRAARRRWIIVMLYGLWIRLAEASSIKMSSFKKHH
CCHHHHHHEEEEEEHHHCCCCHHHHHHHHHHCEEHHHHHHHHHHHHCCCCHHHHHHHHHC
NIWTLTVVGKGRKERSFEVTSGVIMELSQYRMHNELPSLLAVMEDQPAILPIRPGKGRTP
CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
NKPCTSTSIYREVKLVAEATAARLEREGTELPLDEHEQLIESIRNISPHWFRHSGASEAI
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCC
NAEYPIRDAADRLGHASINTTSQMYHHADNRKRRDALERIEDNRTKEPGEFYL
CCCCCCHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNSEIARSDGFDFQLPAVGQGNAPISADAQAMGQWLAIYKLRSPNTFRTYFKEGKRWLAW
CCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHH
LEFRRGPTQSSHLQVASEDDVQTYLLALGRPEDKRGSEDQPFQPTVLPGHLLTKYRLTSQ
HHHHCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
PFLKEHLPRSMAHALSSVSALYTFLGKSIDSGSEAYVRHNPTLRLSRLMDHRVHKVSRHF
CHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHC
SPRVYAEMLVTIEISRLEATDKEKLLRAARRRWIIVMLYGLWIRLAEASSIKMSSFKKHH
CCHHHHHHEEEEEEHHHCCCCHHHHHHHHHHCEEHHHHHHHHHHHHCCCCHHHHHHHHHC
NIWTLTVVGKGRKERSFEVTSGVIMELSQYRMHNELPSLLAVMEDQPAILPIRPGKGRTP
CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
NKPCTSTSIYREVKLVAEATAARLEREGTELPLDEHEQLIESIRNISPHWFRHSGASEAI
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCC
NAEYPIRDAADRLGHASINTTSQMYHHADNRKRRDALERIEDNRTKEPGEFYL
CCCCCCHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA