Definition Rhodoferax ferrireducens T118 plasmid1, complete sequence.
Accession NC_007901
Length 257,447

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The map label for this gene is 89885769

Identifier: 89885769

GI number: 89885769

Start: 40150

End: 40992

Strand: Reverse

Name: 89885769

Synonym: Rfer_4282

Alternate gene names: NA

Gene position: 40992-40150 (Counterclockwise)

Preceding gene: 89885770

Following gene: 89885766

Centisome position: 15.92

GC content: 59.43

Gene sequence:

>843_bases
ATGCAACTTCACGAAGTTAACCGTCATTTGGAAATGTGTGGCTACGCGCCCCTTGGAGAACAGGAGGTGCAGGCCATCGC
ACAAGGCGCAGGCCCAATATGGCTGGCGTGGCTGGTCGGCTGTTCTCAACTCCAGAAGGACTCGGCGCACTGGGGAGACT
TGCGCGCGGCCGTGATGGCGGTGAGCGTGGTGACCAGCCAGGTGCTGCGAGCCCTCAGGCTGACCCCAAACCTGACAGAA
CGAGTCCAGGCGTTCCTGCGCGTCGGGAAGCCACTGCGCGCTGCCGTTACGGTCTATCTTGCGCAAGTGACCAGTTCAGA
ACTCAAGAGTCAGGCCGCAGCGTTCATTGGCTCATCCATGGGCGCAGCGCCACAGGACATGTCGACATCCATCGAGCGCA
AAGTTCACCGCGTCTATGGCACGAAGGCCGCTGTCACGTTTGAATACGCAAAAACGCGAGACGGACGCTCTTGCCTTCAA
GTCGAGGGCGCTGGACGCGACAGCCGATCGCAGGGTTTCAATTGGAGCGACAAGATCATTCTCCAGTTCAGTGATTCTGA
AGCGATGCAAGTGCTGGCCGTCCTGCGCAACTGGTTGCCTTCTGTCGAGTTCGCGAACCACGGCGCTGCGCGTGATAAAC
GGATGACGTTGACGAAACAGGCGCAGGCAGGCTATCTGGTGAGCATCCGTCAGGCAACGGTGGCCCGTGTTGTGCCGCTT
CCAACCTTTGAAGCGTTCAAAGTAGTCAGTCTGATCATGCGGGTCCTCGGGGACAACTCGCCCCACCTTGACCCGGCCAT
GATCGCCCAAATGTGCCAGGAGATGGCCACCTCGGCAGCTTAA

Upstream 100 bases:

>100_bases
CATTGCTAACGCATATGTCGCGTATGGGCGTTTCGGCCACGAGGGTAGAGCCACCAACGCGAAAAGACCAGATCAGGGGC
GCCGCTGGCGCGACTTTTTA

Downstream 100 bases:

>100_bases
AGCATCGTTACGTCTCCGACTTCCGAAAGAAAAATACTGCTGGATTTCGTGCTGATGCTGCTCATGGTCAACTCCTGCCG
GGCGCGGGTCATGGCCACGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MQLHEVNRHLEMCGYAPLGEQEVQAIAQGAGPIWLAWLVGCSQLQKDSAHWGDLRAAVMAVSVVTSQVLRALRLTPNLTE
RVQAFLRVGKPLRAAVTVYLAQVTSSELKSQAAAFIGSSMGAAPQDMSTSIERKVHRVYGTKAAVTFEYAKTRDGRSCLQ
VEGAGRDSRSQGFNWSDKIILQFSDSEAMQVLAVLRNWLPSVEFANHGAARDKRMTLTKQAQAGYLVSIRQATVARVVPL
PTFEAFKVVSLIMRVLGDNSPHLDPAMIAQMCQEMATSAA

Sequences:

>Translated_280_residues
MQLHEVNRHLEMCGYAPLGEQEVQAIAQGAGPIWLAWLVGCSQLQKDSAHWGDLRAAVMAVSVVTSQVLRALRLTPNLTE
RVQAFLRVGKPLRAAVTVYLAQVTSSELKSQAAAFIGSSMGAAPQDMSTSIERKVHRVYGTKAAVTFEYAKTRDGRSCLQ
VEGAGRDSRSQGFNWSDKIILQFSDSEAMQVLAVLRNWLPSVEFANHGAARDKRMTLTKQAQAGYLVSIRQATVARVVPL
PTFEAFKVVSLIMRVLGDNSPHLDPAMIAQMCQEMATSAA
>Mature_280_residues
MQLHEVNRHLEMCGYAPLGEQEVQAIAQGAGPIWLAWLVGCSQLQKDSAHWGDLRAAVMAVSVVTSQVLRALRLTPNLTE
RVQAFLRVGKPLRAAVTVYLAQVTSSELKSQAAAFIGSSMGAAPQDMSTSIERKVHRVYGTKAAVTFEYAKTRDGRSCLQ
VEGAGRDSRSQGFNWSDKIILQFSDSEAMQVLAVLRNWLPSVEFANHGAARDKRMTLTKQAQAGYLVSIRQATVARVVPL
PTFEAFKVVSLIMRVLGDNSPHLDPAMIAQMCQEMATSAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30558; Mature: 30558

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLHEVNRHLEMCGYAPLGEQEVQAIAQGAGPIWLAWLVGCSQLQKDSAHWGDLRAAVMA
CCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VSVVTSQVLRALRLTPNLTERVQAFLRVGKPLRAAVTVYLAQVTSSELKSQAAAFIGSSM
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAAPQDMSTSIERKVHRVYGTKAAVTFEYAKTRDGRSCLQVEGAGRDSRSQGFNWSDKII
CCCCCHHHHHHHHHHHHHHCCHHEEEEEHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEE
LQFSDSEAMQVLAVLRNWLPSVEFANHGAARDKRMTLTKQAQAGYLVSIRQATVARVVPL
EEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHCCC
PTFEAFKVVSLIMRVLGDNSPHLDPAMIAQMCQEMATSAA
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQLHEVNRHLEMCGYAPLGEQEVQAIAQGAGPIWLAWLVGCSQLQKDSAHWGDLRAAVMA
CCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VSVVTSQVLRALRLTPNLTERVQAFLRVGKPLRAAVTVYLAQVTSSELKSQAAAFIGSSM
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAAPQDMSTSIERKVHRVYGTKAAVTFEYAKTRDGRSCLQVEGAGRDSRSQGFNWSDKII
CCCCCHHHHHHHHHHHHHHCCHHEEEEEHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEE
LQFSDSEAMQVLAVLRNWLPSVEFANHGAARDKRMTLTKQAQAGYLVSIRQATVARVVPL
EEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHCCC
PTFEAFKVVSLIMRVLGDNSPHLDPAMIAQMCQEMATSAA
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA