Click here to switch to the map view.

The map label for this gene is trbG [H]

Identifier: 89885740

GI number: 89885740

Start: 8100

End: 8912

Strand: Reverse

Name: trbG [H]

Synonym: Rfer_4253

Alternate gene names: 89885740

Gene position: 8912-8100 (Counterclockwise)

Preceding gene: 89885741

Following gene: 89885739

Centisome position: 3.46

GC content: 51.66

Gene sequence:

>813_bases
ATGATGAGATTTTTCCTTAAAGCCGTCTTTTCGGTTGTCTTTGTCCTTGCAGCATCCTGGGCGCACGCTCAGGTGGATGC
CGAGCCATTGCCCGGAGATCCACGACTGGTTGTCTTTCAATACGATGAAAACAACAGCTACCGGGTGTTCACCAAGCCGC
TGGCTACAACTCACATTCAGTTCGACAACGATGAGCGGGTAAAAGTTCTTGCGCTCGGGGACACAGTTGGCTGGATCACA
GCCCAAAAAGACAATAACGTCTTTGTCAAGCCGCGTTATCCAAATAGCAGCACGAGCGGCACGTTGATCACAACCAAACG
AACCTACCAGTTCGTATTCAAGTCGACAACAGAGAGCGGGCGTTGGTATCAGCGGGTGTCCTTTCAGAGCCCGACTGACA
TGTTGATAGAGGCATCGGATGCTGATCGTCGCCATCTCGCTGCCGCCGTTGCTGAAAGACCGTCGCCATCAACAGTTGAG
GATCGCAGCAATCAGTCAGTTTCACCGGAACTGCTGAACTTCAACTATGAGGTCACCGGTGACACCCGAATCAAGCCGCT
CAATGTCTTCGATGACGGCATTGCAACGTACATTCAAATTCGTCAGGCTGAAGACGTGCCAGCGGTCTTTCGACTGGTGG
ACAAGGATGTCGAACTCGTTGAGTACGTTCTGAAAGGCAACACAATCGTCATACCGAGGGTATTGGAAGCGGGCCTTCTA
AAGCTTGGCAATCAGGAGGTGCGTTTCTATAACCTGAAGCGGGGCAGTAAGCGGCTGTTCGGGGGCTATTCGTTTGAAGG
TTCGGAAAAATGA

Upstream 100 bases:

>100_bases
CGCTTCAGTTCGCCCGTGAACAGCCAACGACCCCACAGGAACTCGATCTCAACCCCTTGGGAATGTATATCACCCACTTT
GAGATTGGCGAGGAAAGATG

Downstream 100 bases:

>100_bases
GTACCCAGCCATCCCTGCAAACGCCGGATCAGGTGTTGGAGGCCCCTTTGATGGAGGTTCCGCCAAAAGGACTGATCCCA
CGGTCTGGGCTCTTCTTCTT

Product: conjugal transfer protein TrbG/VirB9/CagX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MMRFFLKAVFSVVFVLAASWAHAQVDAEPLPGDPRLVVFQYDENNSYRVFTKPLATTHIQFDNDERVKVLALGDTVGWIT
AQKDNNVFVKPRYPNSSTSGTLITTKRTYQFVFKSTTESGRWYQRVSFQSPTDMLIEASDADRRHLAAAVAERPSPSTVE
DRSNQSVSPELLNFNYEVTGDTRIKPLNVFDDGIATYIQIRQAEDVPAVFRLVDKDVELVEYVLKGNTIVIPRVLEAGLL
KLGNQEVRFYNLKRGSKRLFGGYSFEGSEK

Sequences:

>Translated_270_residues
MMRFFLKAVFSVVFVLAASWAHAQVDAEPLPGDPRLVVFQYDENNSYRVFTKPLATTHIQFDNDERVKVLALGDTVGWIT
AQKDNNVFVKPRYPNSSTSGTLITTKRTYQFVFKSTTESGRWYQRVSFQSPTDMLIEASDADRRHLAAAVAERPSPSTVE
DRSNQSVSPELLNFNYEVTGDTRIKPLNVFDDGIATYIQIRQAEDVPAVFRLVDKDVELVEYVLKGNTIVIPRVLEAGLL
KLGNQEVRFYNLKRGSKRLFGGYSFEGSEK
>Mature_270_residues
MMRFFLKAVFSVVFVLAASWAHAQVDAEPLPGDPRLVVFQYDENNSYRVFTKPLATTHIQFDNDERVKVLALGDTVGWIT
AQKDNNVFVKPRYPNSSTSGTLITTKRTYQFVFKSTTESGRWYQRVSFQSPTDMLIEASDADRRHLAAAVAERPSPSTVE
DRSNQSVSPELLNFNYEVTGDTRIKPLNVFDDGIATYIQIRQAEDVPAVFRLVDKDVELVEYVLKGNTIVIPRVLEAGLL
KLGNQEVRFYNLKRGSKRLFGGYSFEGSEK

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbG/virB9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010258
- InterPro:   IPR014142 [H]

Pfam domain/function: PF03524 CagX [H]

EC number: NA

Molecular weight: Translated: 30575; Mature: 30575

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRFFLKAVFSVVFVLAASWAHAQVDAEPLPGDPRLVVFQYDENNSYRVFTKPLATTHIQ
CHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEEECCCCCEEEEECCCEEEEEE
FDNDERVKVLALGDTVGWITAQKDNNVFVKPRYPNSSTSGTLITTKRTYQFVFKSTTESG
ECCCCEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCC
RWYQRVSFQSPTDMLIEASDADRRHLAAAVAERPSPSTVEDRSNQSVSPELLNFNYEVTG
CEEEEECCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEEEEECC
DTRIKPLNVFDDGIATYIQIRQAEDVPAVFRLVDKDVELVEYVLKGNTIVIPRVLEAGLL
CCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHCCCEEEEHHHHHHHHH
KLGNQEVRFYNLKRGSKRLFGGYSFEGSEK
HCCCCEEEEEEECCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MMRFFLKAVFSVVFVLAASWAHAQVDAEPLPGDPRLVVFQYDENNSYRVFTKPLATTHIQ
CHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEEECCCCCEEEEECCCEEEEEE
FDNDERVKVLALGDTVGWITAQKDNNVFVKPRYPNSSTSGTLITTKRTYQFVFKSTTESG
ECCCCEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCC
RWYQRVSFQSPTDMLIEASDADRRHLAAAVAERPSPSTVEDRSNQSVSPELLNFNYEVTG
CEEEEECCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEEEEECC
DTRIKPLNVFDDGIATYIQIRQAEDVPAVFRLVDKDVELVEYVLKGNTIVIPRVLEAGLL
CCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHCCCEEEEHHHHHHHHH
KLGNQEVRFYNLKRGSKRLFGGYSFEGSEK
HCCCCEEEEEEECCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]