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The map label for this gene is 89885737

Identifier: 89885737

GI number: 89885737

Start: 5114

End: 5593

Strand: Reverse

Name: 89885737

Synonym: Rfer_4250

Alternate gene names: NA

Gene position: 5593-5114 (Counterclockwise)

Preceding gene: 89885738

Following gene: 89885736

Centisome position: 2.17

GC content: 55.83

Gene sequence:

>480_bases
ATGAAGAACCTACAAAAATCCATCGTTTGCATTGCTGTCCTTGCGGCCGCTACGTCTGCCTTAAGTGTTCCGCTGCGGAC
GCCCAACGTCATGATCGCGGTTTCTGATGAAGACACCATGTTGCCAATGGCACCAAACAAGAAGGTTGCTGCACCAGTAA
ACCAGGTGGCCCCAAAGCCAGTGGTTGTGCAACCCGTCGCTCCCGCAGCCACTCCACCGGGACGGGTATTCGAGTTGCGC
CGCAGCGACGGCAATGTGAAAACTGCCTTCTTGCGGTGGGCAGAAGCGGCAGATAAGCAGGTGAATTGGCAGCTACAGAG
CGAGTTGCCATTGGACGCGACGGCACGCATTGAAGCTTCGACATTGGCCGAAGCTATGACGGAGGTGGCGAAAGCGTTTA
CGACCCACGCGAAACCATTCGTCATTCGTGAGTATGACAACACGATTCTGGTACTGCCCCGCCTAGTGGCTCGCCCTTAA

Upstream 100 bases:

>100_bases
GGATGCAGTCAATGTCGTGGTTGCCCAGGCCAACAAAATTGGCTATCCGCTCGCTGTTGAAGTGAACAACAAAGTATTGA
CCATCAAGTAAGGCTGCAAT

Downstream 100 bases:

>100_bases
GGAACTGACAACAAAATGAAAATTCTATCCTTTGCAAATCGATCACTGCTTGCGGTATGTTTAGTCATGTTGTCGGCATG
CAGCACTCAAGGTGTCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MKNLQKSIVCIAVLAAATSALSVPLRTPNVMIAVSDEDTMLPMAPNKKVAAPVNQVAPKPVVVQPVAPAATPPGRVFELR
RSDGNVKTAFLRWAEAADKQVNWQLQSELPLDATARIEASTLAEAMTEVAKAFTTHAKPFVIREYDNTILVLPRLVARP

Sequences:

>Translated_159_residues
MKNLQKSIVCIAVLAAATSALSVPLRTPNVMIAVSDEDTMLPMAPNKKVAAPVNQVAPKPVVVQPVAPAATPPGRVFELR
RSDGNVKTAFLRWAEAADKQVNWQLQSELPLDATARIEASTLAEAMTEVAKAFTTHAKPFVIREYDNTILVLPRLVARP
>Mature_159_residues
MKNLQKSIVCIAVLAAATSALSVPLRTPNVMIAVSDEDTMLPMAPNKKVAAPVNQVAPKPVVVQPVAPAATPPGRVFELR
RSDGNVKTAFLRWAEAADKQVNWQLQSELPLDATARIEASTLAEAMTEVAKAFTTHAKPFVIREYDNTILVLPRLVARP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17176; Mature: 17176

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLQKSIVCIAVLAAATSALSVPLRTPNVMIAVSDEDTMLPMAPNKKVAAPVNQVAPKP
CCCHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCCEECCCCCCCCCCCHHHCCCCC
VVVQPVAPAATPPGRVFELRRSDGNVKTAFLRWAEAADKQVNWQLQSELPLDATARIEAS
EEEECCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHCCCCCCEEEECCCCCCCCCEEHHH
TLAEAMTEVAKAFTTHAKPFVIREYDNTILVLPRLVARP
HHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECHHHCCC
>Mature Secondary Structure
MKNLQKSIVCIAVLAAATSALSVPLRTPNVMIAVSDEDTMLPMAPNKKVAAPVNQVAPKP
CCCHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCCEECCCCCCCCCCCHHHCCCCC
VVVQPVAPAATPPGRVFELRRSDGNVKTAFLRWAEAADKQVNWQLQSELPLDATARIEAS
EEEECCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHCCCCCCEEEECCCCCCCCCEEHHH
TLAEAMTEVAKAFTTHAKPFVIREYDNTILVLPRLVARP
HHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA