| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89257128
Identifier: 89257128
GI number: 89257128
Start: 1808659
End: 1809114
Strand: Reverse
Name: 89257128
Synonym: FTL_1876
Alternate gene names: NA
Gene position: 1809114-1808659 (Counterclockwise)
Preceding gene: 89257129
Following gene: 89257127
Centisome position: 95.42
GC content: 42.11
Gene sequence:
>456_bases TTGGGGAATGCAAATAGAGCTGGGCACTGGCATTTAGGTCTAATGTTTGGTGGAACTATGGGCGGCTCCAATATGAAAAT GCGTGGAGCTACAGGTAATGTGATGATTATGCCAGGATATAACTTTAATAAATACCTAGGTATTCAGTATAATCAAATGA TCTCATATAGTGGAACATTTACCGGTATCGGCGAGGCAACGATTATGATTCCTACTGGTTCAATGATTATGCCATATGCT GCAGCTGGTTGGTCGAATATGTCAGGATCTGTTCAAGGTGCTTGGGATGTTGGAGGTGGTATCAACATTGCATTATCAAA AACTCTTAGCGCTGTTGCAGCCTATAGATATATACAGACTATGGCTGCTAGCCCTATTGCAGGTGCTGGAATGAACCAGC CTAATGCTAGAGCTGCTATGAGTATGGTATCAGGAGGTTTAGTTTGGTACTTTTGA
Upstream 100 bases:
>100_bases GCATTAATACAGCTAGTGAGACTTCAATAAGCAGCGGCTTAAAATATTTTACAGAACCATTTTTAGATACTTTTGATTCT TTGACAAATGCTAAAGATAG
Downstream 100 bases:
>100_bases TAAGCTTATATTCTAAATACTCTCTAGCTTATATTTATAAGTTATTTTCTCATCCTTTTTAGGTCCTAATATTTGCCAAT CAAGTTTAATTTGATCCGTA
Product: outer membrane associated protein, fragment
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MGNANRAGHWHLGLMFGGTMGGSNMKMRGATGNVMIMPGYNFNKYLGIQYNQMISYSGTFTGIGEATIMIPTGSMIMPYA AAGWSNMSGSVQGAWDVGGGINIALSKTLSAVAAYRYIQTMAASPIAGAGMNQPNARAAMSMVSGGLVWYF
Sequences:
>Translated_151_residues MGNANRAGHWHLGLMFGGTMGGSNMKMRGATGNVMIMPGYNFNKYLGIQYNQMISYSGTFTGIGEATIMIPTGSMIMPYA AAGWSNMSGSVQGAWDVGGGINIALSKTLSAVAAYRYIQTMAASPIAGAGMNQPNARAAMSMVSGGLVWYF >Mature_150_residues GNANRAGHWHLGLMFGGTMGGSNMKMRGATGNVMIMPGYNFNKYLGIQYNQMISYSGTFTGIGEATIMIPTGSMIMPYAA AGWSNMSGSVQGAWDVGGGINIALSKTLSAVAAYRYIQTMAASPIAGAGMNQPNARAAMSMVSGGLVWYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15815; Mature: 15683
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 10.6 %Met (Translated Protein) 10.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 10.0 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNANRAGHWHLGLMFGGTMGGSNMKMRGATGNVMIMPGYNFNKYLGIQYNQMISYSGTF CCCCCCCCEEEEEEEEECEECCCCEEEECCCCCEEEEECCCCCEEECEEEHHEEEECCCE TGIGEATIMIPTGSMIMPYAAAGWSNMSGSVQGAWDVGGGINIALSKTLSAVAAYRYIQT ECCCCEEEEEECCCEEECEECCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHH MAASPIAGAGMNQPNARAAMSMVSGGLVWYF HHCCCCCCCCCCCCCHHHHHHHHCCCEEEEC >Mature Secondary Structure GNANRAGHWHLGLMFGGTMGGSNMKMRGATGNVMIMPGYNFNKYLGIQYNQMISYSGTF CCCCCCCEEEEEEEEECEECCCCEEEECCCCCEEEEECCCCCEEECEEEHHEEEECCCE TGIGEATIMIPTGSMIMPYAAAGWSNMSGSVQGAWDVGGGINIALSKTLSAVAAYRYIQT ECCCCEEEEEECCCEEECEECCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHH MAASPIAGAGMNQPNARAAMSMVSGGLVWYF HHCCCCCCCCCCCCCHHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA