| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256931
Identifier: 89256931
GI number: 89256931
Start: 1587892
End: 1589208
Strand: Reverse
Name: 89256931
Synonym: FTL_1658
Alternate gene names: NA
Gene position: 1589208-1587892 (Counterclockwise)
Preceding gene: 89256932
Following gene: 89256930
Centisome position: 83.82
GC content: 33.56
Gene sequence:
>1317_bases ATGTTAAAAAGTATCAGTAGGGTTCTTGTAGCTGGATTTGCATTAGCGATGGTAAGTCCAGTTTTCTCAATGGAAATATA TACCGTTAAATCAAATGATTATCTATATAAAATAGCAAAAAATCACGCAGTAACAGGTGTAAGCATATCTGAGTTAACAG ATGCTATTAAGGGTATCAATAAATCTGAGATACCTGGAATTATTGATAATAGAATAAGAATTGGTGATAAACTTGCTATC CCAACTACTAAGGCTGAGGTTGAGGATGGCTTAACACTGATGAGAAATCAGATAATTCAAAGCTCATACCAAAAGCCTAG CAGTGATACAACTTCGCAACAACCTAGTACACCTGCTGCTAATCTTGGTGATAATACAGCAGCTGCTAATGATGCTGATG ATTCATCAACTCCAAGTGTGGTAAGCCAAGACAAAATTCCAGTACTAATCCCTACTGATGATAATAGTACTCCAGAGACA TATAAAAGTAATCTAGATACTCAAATAAACTCTGATAATATTCAAGAAACAGCATCTTATGAGCAACAGCCAACACAATC TTCAAGTACTTGGGGATCATTATTTAGATTTATTATTTATGTCATAATATTAGCTGTAGTTGTTGTTGTTGGTAAAAGGT TTTGGGAAACTAGAAACTCAAAAAAAGAGCAAGAACTTGAGCTCATATCAAAAAAGAAGAGAGATCATTTGATGTCACGA ATATCTCCGGTTGTTTCTGATAATGAGTTTTATAGATCTGATAAGGTTAATAATAGCCCACAAGAGGAATTTGATTTCTT TGGAGCTGCAAAATCATCTAGATCAGAGGTAACTACTGTTGATGAAGAAATTCAATCACAGCAAGAATCTGAAGATACTT TTGAGCAGCCTGCTCAAAATGAAGAGGATTTATTTGCTCAAAGAGATAAAAATATTATTGTCAAAACTGAGAAAGGCGTG GTCTTTGAGACCAATACAGATGACACACTTGTCAATTCTACAGCTGATGAAACTAAAGTTGAAGAGATAGACTCACAACA GCAAGCAGAACAAGAATTACAATATATAAACGAACTTATTGAACAGTTCTTAGATAGTGAAAAGTATGTTGAGGCTAGTA TCACGATTCAGGATTCATTAGAAAAAGATCCAAATAATATTGATTTACGTTATAAGCTTCTAGAAGTATATGCTCGTGCA GGCGATGAAATAGCTTTTGAAGGAGAGGTACATTTTATTAAGTCTAAAAATATTGTCAGTATGTTTGATCCATTACATCA AAAAATTGCTAAACTTAGAGATAAATATTTTGAGTGA
Upstream 100 bases:
>100_bases TATTTAGTGCAACAAGAGAGCACTAGTATCATATACTTTTTAACTAGAAAAAATATGCTATAATTTTTTAGTCTTTGTTT ATAATTTGTTAGGGTGCTAA
Downstream 100 bases:
>100_bases TTATTTACTTAACTAAATTTTTAGAGAGAAAGATGTTTTTCAAGAAAAAAAAGAATACAGAAATTGAATCACCTATAGAA AAAGTACAAGAGAAGGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: Type IV Pili Pilus Assembly Protein
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MLKSISRVLVAGFALAMVSPVFSMEIYTVKSNDYLYKIAKNHAVTGVSISELTDAIKGINKSEIPGIIDNRIRIGDKLAI PTTKAEVEDGLTLMRNQIIQSSYQKPSSDTTSQQPSTPAANLGDNTAAANDADDSSTPSVVSQDKIPVLIPTDDNSTPET YKSNLDTQINSDNIQETASYEQQPTQSSSTWGSLFRFIIYVIILAVVVVVGKRFWETRNSKKEQELELISKKKRDHLMSR ISPVVSDNEFYRSDKVNNSPQEEFDFFGAAKSSRSEVTTVDEEIQSQQESEDTFEQPAQNEEDLFAQRDKNIIVKTEKGV VFETNTDDTLVNSTADETKVEEIDSQQQAEQELQYINELIEQFLDSEKYVEASITIQDSLEKDPNNIDLRYKLLEVYARA GDEIAFEGEVHFIKSKNIVSMFDPLHQKIAKLRDKYFE
Sequences:
>Translated_438_residues MLKSISRVLVAGFALAMVSPVFSMEIYTVKSNDYLYKIAKNHAVTGVSISELTDAIKGINKSEIPGIIDNRIRIGDKLAI PTTKAEVEDGLTLMRNQIIQSSYQKPSSDTTSQQPSTPAANLGDNTAAANDADDSSTPSVVSQDKIPVLIPTDDNSTPET YKSNLDTQINSDNIQETASYEQQPTQSSSTWGSLFRFIIYVIILAVVVVVGKRFWETRNSKKEQELELISKKKRDHLMSR ISPVVSDNEFYRSDKVNNSPQEEFDFFGAAKSSRSEVTTVDEEIQSQQESEDTFEQPAQNEEDLFAQRDKNIIVKTEKGV VFETNTDDTLVNSTADETKVEEIDSQQQAEQELQYINELIEQFLDSEKYVEASITIQDSLEKDPNNIDLRYKLLEVYARA GDEIAFEGEVHFIKSKNIVSMFDPLHQKIAKLRDKYFE >Mature_438_residues MLKSISRVLVAGFALAMVSPVFSMEIYTVKSNDYLYKIAKNHAVTGVSISELTDAIKGINKSEIPGIIDNRIRIGDKLAI PTTKAEVEDGLTLMRNQIIQSSYQKPSSDTTSQQPSTPAANLGDNTAAANDADDSSTPSVVSQDKIPVLIPTDDNSTPET YKSNLDTQINSDNIQETASYEQQPTQSSSTWGSLFRFIIYVIILAVVVVVGKRFWETRNSKKEQELELISKKKRDHLMSR ISPVVSDNEFYRSDKVNNSPQEEFDFFGAAKSSRSEVTTVDEEIQSQQESEDTFEQPAQNEEDLFAQRDKNIIVKTEKGV VFETNTDDTLVNSTADETKVEEIDSQQQAEQELQYINELIEQFLDSEKYVEASITIQDSLEKDPNNIDLRYKLLEVYARA GDEIAFEGEVHFIKSKNIVSMFDPLHQKIAKLRDKYFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49322; Mature: 49322
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKSISRVLVAGFALAMVSPVFSMEIYTVKSNDYLYKIAKNHAVTGVSISELTDAIKGIN CCHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHCCC KSEIPGIIDNRIRIGDKLAIPTTKAEVEDGLTLMRNQIIQSSYQKPSSDTTSQQPSTPAA CCCCCCHHCCCEECCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC NLGDNTAAANDADDSSTPSVVSQDKIPVLIPTDDNSTPETYKSNLDTQINSDNIQETASY CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHH EQQPTQSSSTWGSLFRFIIYVIILAVVVVVGKRFWETRNSKKEQELELISKKKRDHLMSR HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ISPVVSDNEFYRSDKVNNSPQEEFDFFGAAKSSRSEVTTVDEEIQSQQESEDTFEQPAQN HHHHHCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC EEDLFAQRDKNIIVKTEKGVVFETNTDDTLVNSTADETKVEEIDSQQQAEQELQYINELI HHHHHHHCCCCEEEEECCCEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EQFLDSEKYVEASITIQDSLEKDPNNIDLRYKLLEVYARAGDEIAFEGEVHFIKSKNIVS HHHHCCCCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHCCCCEEECCCEEEEECCCHHH MFDPLHQKIAKLRDKYFE HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKSISRVLVAGFALAMVSPVFSMEIYTVKSNDYLYKIAKNHAVTGVSISELTDAIKGIN CCHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHCCC KSEIPGIIDNRIRIGDKLAIPTTKAEVEDGLTLMRNQIIQSSYQKPSSDTTSQQPSTPAA CCCCCCHHCCCEECCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC NLGDNTAAANDADDSSTPSVVSQDKIPVLIPTDDNSTPETYKSNLDTQINSDNIQETASY CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHH EQQPTQSSSTWGSLFRFIIYVIILAVVVVVGKRFWETRNSKKEQELELISKKKRDHLMSR HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ISPVVSDNEFYRSDKVNNSPQEEFDFFGAAKSSRSEVTTVDEEIQSQQESEDTFEQPAQN HHHHHCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC EEDLFAQRDKNIIVKTEKGVVFETNTDDTLVNSTADETKVEEIDSQQQAEQELQYINELI HHHHHHHCCCCEEEEECCCEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EQFLDSEKYVEASITIQDSLEKDPNNIDLRYKLLEVYARAGDEIAFEGEVHFIKSKNIVS HHHHCCCCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHCCCCEEECCCEEEEECCCHHH MFDPLHQKIAKLRDKYFE HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA