Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is erpA [H]
Identifier: 89256820
GI number: 89256820
Start: 1465067
End: 1465417
Strand: Reverse
Name: erpA [H]
Synonym: FTL_1536
Alternate gene names: 89256820
Gene position: 1465417-1465067 (Counterclockwise)
Preceding gene: 89256821
Following gene: 89256819
Centisome position: 77.29
GC content: 36.75
Gene sequence:
>351_bases ATGAGTGAAGTAGTTCAAAGCGTTGATCCGATAAACTTTACAGAAGCCGCTTCTTTAAAGGTTAAAGAACTAATTGAAGA GGAGGGTGATAATTCTCTTAGCCTTAGAGTATACATCACCGGTGGGGGCTGTTCTGGGTTTCAATATGCTTTTGCTTTTG ATAATGAAGTAAAAGAAGATGATATGGTTATTACTAAAAATGGTGTTCGCCTTTTGGTAGATTCTATGAGTTTTCAGTAC TTGGTTGGTGCTGATGTTGACTACAAAGATGATGTCGAAGGTGCATACTTTGTAATTAGAAATCCAAATGCGAAAACTAC TTGTGGCTGTGGTTCATCTTTTTCTGTATAA
Upstream 100 bases:
>100_bases AAACTAACTCGTTAGTAGAAGGTCAAGGATTAGAAGTTTTAGTTCAAAATATCGATAGAGGTGGTAGAGTTAAACTTTCT CTTGTAGCGAGGTAATTATT
Downstream 100 bases:
>100_bases TTATCACAAGTGTATTTAAATAAAAATCTTATGAAAATTGCTAATTTTGAAGTAGGAAATGGTAAGCCATTTTTCTTAAT GTCTGGTCCTTGTGTCATTG
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSEVVQSVDPINFTEAASLKVKELIEEEGDNSLSLRVYITGGGCSGFQYAFAFDNEVKEDDMVITKNGVRLLVDSMSFQY LVGADVDYKDDVEGAYFVIRNPNAKTTCGCGSSFSV
Sequences:
>Translated_116_residues MSEVVQSVDPINFTEAASLKVKELIEEEGDNSLSLRVYITGGGCSGFQYAFAFDNEVKEDDMVITKNGVRLLVDSMSFQY LVGADVDYKDDVEGAYFVIRNPNAKTTCGCGSSFSV >Mature_115_residues SEVVQSVDPINFTEAASLKVKELIEEEGDNSLSLRVYITGGGCSGFQYAFAFDNEVKEDDMVITKNGVRLLVDSMSFQYL VGADVDYKDDVEGAYFVIRNPNAKTTCGCGSSFSV
Specific function: Required for insertion of 4Fe-4S clusters for at least ispG [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI160420328, Length=107, Percent_Identity=39.2523364485981, Blast_Score=86, Evalue=9e-18, Organism=Homo sapiens, GI52426768, Length=106, Percent_Identity=30.188679245283, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786351, Length=107, Percent_Identity=63.5514018691589, Blast_Score=148, Evalue=9e-38, Organism=Escherichia coli, GI1788877, Length=106, Percent_Identity=33.9622641509434, Blast_Score=70, Evalue=4e-14, Organism=Escherichia coli, GI1787974, Length=106, Percent_Identity=29.2452830188679, Blast_Score=67, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71998452, Length=108, Percent_Identity=37.037037037037, Blast_Score=82, Evalue=6e-17, Organism=Caenorhabditis elegans, GI25146411, Length=114, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193209025, Length=106, Percent_Identity=29.2452830188679, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323001, Length=82, Percent_Identity=39.0243902439024, Blast_Score=73, Evalue=1e-14, Organism=Drosophila melanogaster, GI24649697, Length=83, Percent_Identity=42.1686746987952, Blast_Score=79, Evalue=5e-16, Organism=Drosophila melanogaster, GI24642263, Length=114, Percent_Identity=29.8245614035088, Blast_Score=72, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 12658; Mature: 12527
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVVQSVDPINFTEAASLKVKELIEEEGDNSLSLRVYITGGGCSGFQYAFAFDNEVKED CCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCC DMVITKNGVRLLVDSMSFQYLVGADVDYKDDVEGAYFVIRNPNAKTTCGCGSSFSV CEEEECCCEEEEEECCCEEEEEECCCCCCCCCCEEEEEEECCCCCCEECCCCCCCC >Mature Secondary Structure SEVVQSVDPINFTEAASLKVKELIEEEGDNSLSLRVYITGGGCSGFQYAFAFDNEVKED CCHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCC DMVITKNGVRLLVDSMSFQYLVGADVDYKDDVEGAYFVIRNPNAKTTCGCGSSFSV CEEEECCCEEEEEECCCEEEEEECCCCCCCCCCEEEEEEECCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA