Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256816
Identifier: 89256816
GI number: 89256816
Start: 1462485
End: 1463057
Strand: Reverse
Name: 89256816
Synonym: FTL_1532
Alternate gene names: NA
Gene position: 1463057-1462485 (Counterclockwise)
Preceding gene: 89256817
Following gene: 89256815
Centisome position: 77.17
GC content: 32.64
Gene sequence:
>573_bases ATGAAAACAAAGTTTATAATAGCTTCATTATTTTTATCAGCAGGCGTTTGCTCTATATCCTATGCAGATACAGTAGATAG TACTTCGATATGCCCAACTGATTTGAAATATAAAACTATAGGTATGAGAGATATGTCTTTTAGGTATGCGCAATATAAAG ATCATATTTGTGCTATTTTAGAAGTTGATCTTAATAAAAATAAACAATGGCGCGAAAAAGGTAGTGGTTGGTTTGCTGCT GGTTTTGGAGCTAAGACAATGAAGGGGTCAAATATGTTTATATTTGTGCCAAATAAATCTCAGTCTCAAGATATACGCTA TGATATTTTTGCAAATATTGGTGGAGCATATGGTCCTACTAAATCTTTAGATACTAAACCACAAAAAGGACAAATAGAGC TTTTATCATCTTCATTAGCTAAAGTTGAGTTCGCTTTATATCCACAAAAAATTCCAGGTTTAGCAACTAATGGGAATATA GATATGATTTTCTCACATTCAAAAGCTGGGGTTTATCAGTTTGCTCCAGGTCATGTCGCAGCATATGATGATAAATCTAT CAATCTAAAATAG
Upstream 100 bases:
>100_bases CTTTTTTTATGTCTAATAACTTTTATCTCTAAATTTATCTTTAATAATATTTAACTTTTATATGCTAAAATCTCTTTAAT AAGCTTTACGAGGAGATTTT
Downstream 100 bases:
>100_bases TAAAAGCTAAGACTAAGTTTTGTGATTAAGTTGTATTTATGATTTGAATTAAATACAATTGTCGTAATATTTTTTTGTTT AATTATTTATGGGAAGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKTKFIIASLFLSAGVCSISYADTVDSTSICPTDLKYKTIGMRDMSFRYAQYKDHICAILEVDLNKNKQWREKGSGWFAA GFGAKTMKGSNMFIFVPNKSQSQDIRYDIFANIGGAYGPTKSLDTKPQKGQIELLSSSLAKVEFALYPQKIPGLATNGNI DMIFSHSKAGVYQFAPGHVAAYDDKSINLK
Sequences:
>Translated_190_residues MKTKFIIASLFLSAGVCSISYADTVDSTSICPTDLKYKTIGMRDMSFRYAQYKDHICAILEVDLNKNKQWREKGSGWFAA GFGAKTMKGSNMFIFVPNKSQSQDIRYDIFANIGGAYGPTKSLDTKPQKGQIELLSSSLAKVEFALYPQKIPGLATNGNI DMIFSHSKAGVYQFAPGHVAAYDDKSINLK >Mature_190_residues MKTKFIIASLFLSAGVCSISYADTVDSTSICPTDLKYKTIGMRDMSFRYAQYKDHICAILEVDLNKNKQWREKGSGWFAA GFGAKTMKGSNMFIFVPNKSQSQDIRYDIFANIGGAYGPTKSLDTKPQKGQIELLSSSLAKVEFALYPQKIPGLATNGNI DMIFSHSKAGVYQFAPGHVAAYDDKSINLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20965; Mature: 20965
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKFIIASLFLSAGVCSISYADTVDSTSICPTDLKYKTIGMRDMSFRYAQYKDHICAIL CCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCEEEEE EVDLNKNKQWREKGSGWFAAGFGAKTMKGSNMFIFVPNKSQSQDIRYDIFANIGGAYGPT EEECCCCHHHHHCCCCEEEECCCCCEECCCEEEEEEECCCCCCCEEEEEEECCCCCCCCC KSLDTKPQKGQIELLSSSLAKVEFALYPQKIPGLATNGNIDMIFSHSKAGVYQFAPGHVA CCCCCCCCCCHHHEEHHHHHEEEEEECCCCCCCEEECCCEEEEEECCCCCEEEECCCCEE AYDDKSINLK EECCCCCCCC >Mature Secondary Structure MKTKFIIASLFLSAGVCSISYADTVDSTSICPTDLKYKTIGMRDMSFRYAQYKDHICAIL CCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCEEEEE EVDLNKNKQWREKGSGWFAAGFGAKTMKGSNMFIFVPNKSQSQDIRYDIFANIGGAYGPT EEECCCCHHHHHCCCCEEEECCCCCEECCCEEEEEEECCCCCCCEEEEEEECCCCCCCCC KSLDTKPQKGQIELLSSSLAKVEFALYPQKIPGLATNGNIDMIFSHSKAGVYQFAPGHVA CCCCCCCCCCHHHEEHHHHHEEEEEECCCCCCCEEECCCEEEEEECCCCCEEEECCCCEE AYDDKSINLK EECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA