Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is fabI [H]
Identifier: 89256735
GI number: 89256735
Start: 1369371
End: 1370153
Strand: Reverse
Name: fabI [H]
Synonym: FTL_1442
Alternate gene names: 89256735
Gene position: 1370153-1369371 (Counterclockwise)
Preceding gene: 89256740
Following gene: 89256733
Centisome position: 72.27
GC content: 36.91
Gene sequence:
>783_bases ATGGGTTTTCTAGCAGGAAAAAAAATATTAATCACTGGACTTTTAAGTAATAAGTCAATTGCATATGGTATTGCTAAAGC TATGCATAGAGAGGGAGCCGAGCTTGCTTTTACTTATGTTGGACAGTTCAAAGATAGAGTGGAAAAATTATGTGCAGAAT TTAATCCAGCTGCAGTTTTGCCTTGCGATGTGACTTCTGATAAAGAGATTAAGGATTTATTTGTAGAGCTAGGTAAAGTT TGGGATGGTCTAGATGCCATAGTTCATTCTATAGCTTTTGCACCGCGTGATCAGTTAGAAGGTAACTTTATTGACTGTGT AACTCGCGAGGGTTTTAGTATCGCTCATGATATTAGTGCCTATTCTTTTGCAGCATTAGCTAAAGAAGGTCGTAGTATGA TGAAAAATCGTAATGCTTCTATGGTAGCACTTACTTATATTGGAGCAGAAAAAGCTATGCCAAGTTACAATACTATGGGT GTTGCTAAAGCATCTCTAGAAGCTACAGTTAGATATACAGCGTTAGCTTTAGGTGAGGATGGTATCAAGGTAAATGCTGT ATCAGCTGGTCCTATCAAAACTCTGGCAGCTTCTGGTATATCAAACTTCAAGAAGATGCTTGATTATAATGCTATGGTTT CTCCACTTAAGAAAAATGTTGATATTATGGAAGTTGGTAATACTGTAGCGTTTTTATGTTCAGATATGGCAACTGGTATC ACTGGAGAAGTTGTCCATGTTGATGCTGGATATCATTGTGTGTCTATAGGTAATGTTCTTTAA
Upstream 100 bases:
>100_bases GTTAGCTTTGTAATTTAAAAATAAAAGAGCGTTGTATAACTATTTATGAAATTATTAGTAACTAAGATTTTAACAATAAA TCCACAAAGGAGATGTAAAT
Downstream 100 bases:
>100_bases TTTTCTAAATTAATCTGTTTCCAATCAATTAGATTTATTTGTATCTATATAATAAAAACTGATATATTTTATAAAAAATA TTAGGTTCTGTGCACAAAAA
Product: enoyl-[acyl-carrier-protein] reductase (NADH)
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase [H]
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVTSDKEIKDLFVELGKV WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMG VAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGI TGEVVHVDAGYHCVSIGNVL
Sequences:
>Translated_260_residues MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVTSDKEIKDLFVELGKV WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMG VAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGI TGEVVHVDAGYHCVSIGNVL >Mature_259_residues GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVTSDKEIKDLFVELGKVW DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGV AKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGIT GEVVHVDAGYHCVSIGNVL
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787545, Length=252, Percent_Identity=59.9206349206349, Blast_Score=318, Evalue=3e-88, Organism=Escherichia coli, GI1789378, Length=256, Percent_Identity=28.515625, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI87082100, Length=272, Percent_Identity=25, Blast_Score=61, Evalue=9e-11,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 27775; Mature: 27644
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVL CCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCEEE PCDVTSDKEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISA EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCHHHHHHH YSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALGED HHHHHHHHHHHHHHHCCCCCEEEEEEECHHHCCCCCCCCHHHHHHHHHHHEEEEEEECCC GIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGI CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCC TGEVVHVDAGYHCVSIGNVL CCEEEEEECCCEEEECCCCC >Mature Secondary Structure GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVL CCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCEEE PCDVTSDKEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISA EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCHHHHHHH YSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALGED HHHHHHHHHHHHHHHCCCCCEEEEEEECHHHCCCCCCCCHHHHHHHHHHHEEEEEEECCC GIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGI CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCC TGEVVHVDAGYHCVSIGNVL CCEEEEEECCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10464225; 10984043 [H]