Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256722
Identifier: 89256722
GI number: 89256722
Start: 1359563
End: 1360792
Strand: Reverse
Name: 89256722
Synonym: FTL_1429
Alternate gene names: NA
Gene position: 1360792-1359563 (Counterclockwise)
Preceding gene: 89256723
Following gene: 89256721
Centisome position: 71.77
GC content: 30.41
Gene sequence:
>1230_bases ATGAAAATCTTACATGTGTTTAAGTCATTTTATCCATATACTTATGGTGGTATAGAGAAGTTTATACATGAGCTATCGAT TGCTACGGCTAAAAAGTATAATGTTGAGATACATATACTCGCGATGGGTAAAGAAAATCAAACTATAGATAAAGATTTTT ACACATTACATTTTGCTAAAACAAATTTAAATATTGCATCAACTACTTTCTCATTTTCAGCGATTAAAAAATTCAAAGAA TTAGCTAAGCAAGTCGATATTATTCATTATCACTTTCCATATCCATATGCTGATTTATTACAGACTATTTGTAGATTAAA AAAGCCGTACATAGTTACTTATCATTCAGATATTATCAAGCAAAAAAGATTGATGATGTTATATAAACCTTTGATGAAAA GATTTCTTAATGGTGCAAAGTATATATTGCCAACATCACCAAACTATCTTGAGACTAGTGAGACTCTTAGAGAAATAAAA GTACCTAAAAAAGTTATTCCAATGAGTTTAAATAAATCAGATTATAATATTGATGAGGAAAACTATAAGTATTGGCAGCA AAAACTAAACTTTAGAGATACCCGCCTTCGCGAGTATGACAACTCTATCGTAATTACTAATTCCGATCTGGAATCTCCTC TTTATAATCAAAATTATTCACATTGGAAAAATAATATTGGTTTTGAAAAATTCTTTATTTATATAGGCGCTCTGAGATAT TACAAGGGCTTAGATGTCTTGATCGATGCAATGCAAGGGCAAGATTATCCACTTGTTATAGTTAGTGATGGCAATCAAAA GGAGTTGCTTGAGCAAAAAGTTAAGCAAAATAATCTACAAAATGTAAAATTTGTTGGTGCTTTAGATGATAAAGATAAAA TATCATTACTAAAATTAAGTTATGCTTTGGTGTTACCTTCGAATATAAGAACGGAAGCTTTTGGGTTAGTTTTACTTGAA GCAAGTATGTTTGCTAAACCAATGATAACTTGTGAGATCGGCACAGGTACAACTTTTGTGAATATTAACAAACAAACTGG ATTAGTAGCCAAGCCAAATGATAGTCAAGATTTAGCTAAAAAGCTCAAAGAGCTTTGGCAAGATGAACAAAAAGCTCAAG AGTATGGAGCTAATGCTAAAGCTAGATTTGATGATATCTTTAGTCTAGATAAGATGGTTGTCAGTTATAAATCAGTTTAT GATGAAGTGATAGATAGTGGTGTTAAATGA
Upstream 100 bases:
>100_bases TAAAAGAGAGTTGGGTTTTGAGACACAAAAGACTATAGATGATATTTGTGATGATATGCTTAAATGGCAAAAGTACGCAA AAGAGAATAATATCTAGAAA
Downstream 100 bases:
>100_bases AGCAATTTTTTAAGTATTTCATTGGTATTTTAGATACTACTCAGAAAAAAAGGTTTTTTTTATACCTTGTTCTATTATTT TTAGGTTCTACATCTTCTAT
Product: glycosyl transferases group 1 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MKILHVFKSFYPYTYGGIEKFIHELSIATAKKYNVEIHILAMGKENQTIDKDFYTLHFAKTNLNIASTTFSFSAIKKFKE LAKQVDIIHYHFPYPYADLLQTICRLKKPYIVTYHSDIIKQKRLMMLYKPLMKRFLNGAKYILPTSPNYLETSETLREIK VPKKVIPMSLNKSDYNIDEENYKYWQQKLNFRDTRLREYDNSIVITNSDLESPLYNQNYSHWKNNIGFEKFFIYIGALRY YKGLDVLIDAMQGQDYPLVIVSDGNQKELLEQKVKQNNLQNVKFVGALDDKDKISLLKLSYALVLPSNIRTEAFGLVLLE ASMFAKPMITCEIGTGTTFVNINKQTGLVAKPNDSQDLAKKLKELWQDEQKAQEYGANAKARFDDIFSLDKMVVSYKSVY DEVIDSGVK
Sequences:
>Translated_409_residues MKILHVFKSFYPYTYGGIEKFIHELSIATAKKYNVEIHILAMGKENQTIDKDFYTLHFAKTNLNIASTTFSFSAIKKFKE LAKQVDIIHYHFPYPYADLLQTICRLKKPYIVTYHSDIIKQKRLMMLYKPLMKRFLNGAKYILPTSPNYLETSETLREIK VPKKVIPMSLNKSDYNIDEENYKYWQQKLNFRDTRLREYDNSIVITNSDLESPLYNQNYSHWKNNIGFEKFFIYIGALRY YKGLDVLIDAMQGQDYPLVIVSDGNQKELLEQKVKQNNLQNVKFVGALDDKDKISLLKLSYALVLPSNIRTEAFGLVLLE ASMFAKPMITCEIGTGTTFVNINKQTGLVAKPNDSQDLAKKLKELWQDEQKAQEYGANAKARFDDIFSLDKMVVSYKSVY DEVIDSGVK >Mature_409_residues MKILHVFKSFYPYTYGGIEKFIHELSIATAKKYNVEIHILAMGKENQTIDKDFYTLHFAKTNLNIASTTFSFSAIKKFKE LAKQVDIIHYHFPYPYADLLQTICRLKKPYIVTYHSDIIKQKRLMMLYKPLMKRFLNGAKYILPTSPNYLETSETLREIK VPKKVIPMSLNKSDYNIDEENYKYWQQKLNFRDTRLREYDNSIVITNSDLESPLYNQNYSHWKNNIGFEKFFIYIGALRY YKGLDVLIDAMQGQDYPLVIVSDGNQKELLEQKVKQNNLQNVKFVGALDDKDKISLLKLSYALVLPSNIRTEAFGLVLLE ASMFAKPMITCEIGTGTTFVNINKQTGLVAKPNDSQDLAKKLKELWQDEQKAQEYGANAKARFDDIFSLDKMVVSYKSVY DEVIDSGVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 47492; Mature: 47492
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILHVFKSFYPYTYGGIEKFIHELSIATAKKYNVEIHILAMGKENQTIDKDFYTLHFAK CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCCCCCEEEEEEEE TNLNIASTTFSFSAIKKFKELAKQVDIIHYHFPYPYADLLQTICRLKKPYIVTYHSDIIK CCCEEEEEHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHCCCCEEEEECHHHHH QKRLMMLYKPLMKRFLNGAKYILPTSPNYLETSETLREIKVPKKVIPMSLNKSDYNIDEE HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCHH NYKYWQQKLNFRDTRLREYDNSIVITNSDLESPLYNQNYSHWKNNIGFEKFFIYIGALRY HHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHH YKGLDVLIDAMQGQDYPLVIVSDGNQKELLEQKVKQNNLQNVKFVGALDDKDKISLLKLS HCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEHEEEE YALVLPSNIRTEAFGLVLLEASMFAKPMITCEIGTGTTFVNINKQTGLVAKPNDSQDLAK EEEEECCCCCHHHHHHHEEEHHHHCCCEEEEEECCCEEEEEECCCCCEEECCCCHHHHHH KLKELWQDEQKAQEYGANAKARFDDIFSLDKMVVSYKSVYDEVIDSGVK HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKILHVFKSFYPYTYGGIEKFIHELSIATAKKYNVEIHILAMGKENQTIDKDFYTLHFAK CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCCCCCEEEEEEEE TNLNIASTTFSFSAIKKFKELAKQVDIIHYHFPYPYADLLQTICRLKKPYIVTYHSDIIK CCCEEEEEHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHCCCCEEEEECHHHHH QKRLMMLYKPLMKRFLNGAKYILPTSPNYLETSETLREIKVPKKVIPMSLNKSDYNIDEE HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCHH NYKYWQQKLNFRDTRLREYDNSIVITNSDLESPLYNQNYSHWKNNIGFEKFFIYIGALRY HHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHH YKGLDVLIDAMQGQDYPLVIVSDGNQKELLEQKVKQNNLQNVKFVGALDDKDKISLLKLS HCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEHEEEE YALVLPSNIRTEAFGLVLLEASMFAKPMITCEIGTGTTFVNINKQTGLVAKPNDSQDLAK EEEEECCCCCHHHHHHHEEEHHHHCCCEEEEEECCCEEEEEECCCCCEEECCCCHHHHHH KLKELWQDEQKAQEYGANAKARFDDIFSLDKMVVSYKSVYDEVIDSGVK HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]