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The map label for this gene is infC [H]

Identifier: 89256699

GI number: 89256699

Start: 1333307

End: 1333774

Strand: Reverse

Name: infC [H]

Synonym: FTL_1406

Alternate gene names: 89256699

Gene position: 1333774-1333307 (Counterclockwise)

Preceding gene: 89256700

Following gene: 89256698

Centisome position: 70.35

GC content: 41.45

Gene sequence:

>468_bases
GTGCGTCTAGTTGGTGTTGATGGTCAACAAATAGGTGTTGTATCTATCAATGAGGCTTTAGCGTTGGCTGAAGAGGCTGA
TGTTGATTTGGTTGAAATGGTAGCAAATGCTAATCCGCCAGTGTGTCGTTTGATGGACTACGGTAAGTACTTGTTTGAAC
AAGGCAAGAAAAAAGCACAAGCTAAAAAGAACCAAAAGCAGACTCAGGTGAAAGAGGTGAAGCTCAGACCTGTGACTGAT
GTTGGGGATTATCAGGTAAAACTACGCAACCTGATAAAATTCCTTGAAAAAGGCGATAAAGTAAAAGTCACATTGAGATT
TAGAGGTAGAGAAATGTCACATAAAGAGCTGGGTATGGAAATGCTTCAGCGTATGGCAAATGATGCTGCTGAATACGGTG
TGGTGGAACACCAACCTAAACTGGAAGGTCGCCAAATGATTATGGTTTTAGGACCAAAGAAAAAGTAG

Upstream 100 bases:

>100_bases
TAAGCAAATACAGGCTAAAGAATAATAATTTCTGAGGAGGAAAAAGATTATTAAAGCGGATAAAAAAGCACCTATAAATG
AGCAAATTAAAGCAAAAGAG

Downstream 100 bases:

>100_bases
TAAATAAATATAACAATTAATATAAAATGCGGAGTATTAAATATGCCAAAGTTAAAAACTAAAAGTGGTGCTGCTAAGCG
CTTTAAAAAAACTGGTAAGG

Product: translation initiation factor IF-3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MRLVGVDGQQIGVVSINEALALAEEADVDLVEMVANANPPVCRLMDYGKYLFEQGKKKAQAKKNQKQTQVKEVKLRPVTD
VGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHKELGMEMLQRMANDAAEYGVVEHQPKLEGRQMIMVLGPKKK

Sequences:

>Translated_155_residues
MRLVGVDGQQIGVVSINEALALAEEADVDLVEMVANANPPVCRLMDYGKYLFEQGKKKAQAKKNQKQTQVKEVKLRPVTD
VGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHKELGMEMLQRMANDAAEYGVVEHQPKLEGRQMIMVLGPKKK
>Mature_155_residues
MRLVGVDGQQIGVVSINEALALAEEADVDLVEMVANANPPVCRLMDYGKYLFEQGKKKAQAKKNQKQTQVKEVKLRPVTD
VGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHKELGMEMLQRMANDAAEYGVVEHQPKLEGRQMIMVLGPKKK

Specific function: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins [H]

COG id: COG0290

COG function: function code J; Translation initiation factor 3 (IF-3)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=156, Percent_Identity=64.1025641025641, Blast_Score=193, Evalue=6e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 17569; Mature: 17569

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS00938 IF3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVGVDGQQIGVVSINEALALAEEADVDLVEMVANANPPVCRLMDYGKYLFEQGKKKAQ
CEEECCCCCEEEEEEHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AKKNQKQTQVKEVKLRPVTDVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHKELGME
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHH
MLQRMANDAAEYGVVEHQPKLEGRQMIMVLGPKKK
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MRLVGVDGQQIGVVSINEALALAEEADVDLVEMVANANPPVCRLMDYGKYLFEQGKKKAQ
CEEECCCCCEEEEEEHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AKKNQKQTQVKEVKLRPVTDVGDYQVKLRNLIKFLEKGDKVKVTLRFRGREMSHKELGME
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHH
MLQRMANDAAEYGVVEHQPKLEGRQMIMVLGPKKK
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA