Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is 89256696

Identifier: 89256696

GI number: 89256696

Start: 1331929

End: 1332564

Strand: Reverse

Name: 89256696

Synonym: FTL_1403

Alternate gene names: NA

Gene position: 1332564-1331929 (Counterclockwise)

Preceding gene: 89256697

Following gene: 89256694

Centisome position: 70.28

GC content: 27.67

Gene sequence:

>636_bases
TTGTTTTTAATCTTTAATGGTTATAAATATTTTGACGTAGATAAGCTTAATCTTGCATATATCAAGGTAAGTGCCTATGT
TGATAGCCATATTATTTTAGCTTGTCTTAGTTATGCTTGTGTTTATATTTTAACTGTATTTTTTTCTGTACCGGTAAAAC
CATTTTTAAAGATTTTAGCTGGAATTTTATTTGGATTTGTTTTGGGTTTCATTGTCTGTTTATTTGCAGCTACTATAGGG
GCAATGCTAGCTTTTTTATTTATAAAATATAATTGGGGTGAAGCATCTACTAACCCAAAATATAAAATTATTTCTAAATT
TAAATCTTTAGTTGAGAATCATCCTATAACTATACTTTTTGTCGCAAGATTATTGCCGATACCTTTTTTTGTGCCAAATA
TCTTGGCAGGTATCTTAAAAGTTAAAAATAGCATTTTTTTTACTACTACTTTGTTTGGCATAATACCCGTGACATCTATT
TATGTTTGGTTTGGAGTACATTTCAAAGAAGCTGTGATTCAAGGAAATAAAGAAAACTTTATTGATACTAAGTTTGTTGT
AGCTTTGAGTATCTTAGGATTATTAACTTTGTTGGCATTATATGTAGCAAATAAATATACCAATAGGAAAATATAA

Upstream 100 bases:

>100_bases
AATAAAATAAATCTTTTTTTCAAAAAAATTTGTGAAACATCTAAACTTCTTACTTATTAAAAGAATTTTTTTGATATTTT
TTTTAAGTTTTGGGGTATTA

Downstream 100 bases:

>100_bases
AAGTATAAATTGCTATAACATTATTGTAAAGTTTAGAAATTATAATTAATATTATTATTTATCATTAAATATAAATTATA
GATTAATTATGATAAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: SNARE Associated Golgi Protein; SNARE Associated Golgi Protein-Like Protein; Dihydrolipoamide Dehydrogenase; SNARE Associated Golgi Protein-Related Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; SNARE-Associated Family Membrane Protein; tRNA Uridine 5-Carboxymethylaminomethyl GidA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MFLIFNGYKYFDVDKLNLAYIKVSAYVDSHIILACLSYACVYILTVFFSVPVKPFLKILAGILFGFVLGFIVCLFAATIG
AMLAFLFIKYNWGEASTNPKYKIISKFKSLVENHPITILFVARLLPIPFFVPNILAGILKVKNSIFFTTTLFGIIPVTSI
YVWFGVHFKEAVIQGNKENFIDTKFVVALSILGLLTLLALYVANKYTNRKI

Sequences:

>Translated_211_residues
MFLIFNGYKYFDVDKLNLAYIKVSAYVDSHIILACLSYACVYILTVFFSVPVKPFLKILAGILFGFVLGFIVCLFAATIG
AMLAFLFIKYNWGEASTNPKYKIISKFKSLVENHPITILFVARLLPIPFFVPNILAGILKVKNSIFFTTTLFGIIPVTSI
YVWFGVHFKEAVIQGNKENFIDTKFVVALSILGLLTLLALYVANKYTNRKI
>Mature_211_residues
MFLIFNGYKYFDVDKLNLAYIKVSAYVDSHIILACLSYACVYILTVFFSVPVKPFLKILAGILFGFVLGFIVCLFAATIG
AMLAFLFIKYNWGEASTNPKYKIISKFKSLVENHPITILFVARLLPIPFFVPNILAGILKVKNSIFFTTTLFGIIPVTSI
YVWFGVHFKEAVIQGNKENFIDTKFVVALSILGLLTLLALYVANKYTNRKI

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23797; Mature: 23797

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLIFNGYKYFDVDKLNLAYIKVSAYVDSHIILACLSYACVYILTVFFSVPVKPFLKILA
CEEEECCEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GILFGFVLGFIVCLFAATIGAMLAFLFIKYNWGEASTNPKYKIISKFKSLVENHPITILF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
VARLLPIPFFVPNILAGILKVKNSIFFTTTLFGIIPVTSIYVWFGVHFKEAVIQGNKENF
HHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IDTKFVVALSILGLLTLLALYVANKYTNRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFLIFNGYKYFDVDKLNLAYIKVSAYVDSHIILACLSYACVYILTVFFSVPVKPFLKILA
CEEEECCEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GILFGFVLGFIVCLFAATIGAMLAFLFIKYNWGEASTNPKYKIISKFKSLVENHPITILF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
VARLLPIPFFVPNILAGILKVKNSIFFTTTLFGIIPVTSIYVWFGVHFKEAVIQGNKENF
HHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IDTKFVVALSILGLLTLLALYVANKYTNRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA