| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256696
Identifier: 89256696
GI number: 89256696
Start: 1331929
End: 1332564
Strand: Reverse
Name: 89256696
Synonym: FTL_1403
Alternate gene names: NA
Gene position: 1332564-1331929 (Counterclockwise)
Preceding gene: 89256697
Following gene: 89256694
Centisome position: 70.28
GC content: 27.67
Gene sequence:
>636_bases TTGTTTTTAATCTTTAATGGTTATAAATATTTTGACGTAGATAAGCTTAATCTTGCATATATCAAGGTAAGTGCCTATGT TGATAGCCATATTATTTTAGCTTGTCTTAGTTATGCTTGTGTTTATATTTTAACTGTATTTTTTTCTGTACCGGTAAAAC CATTTTTAAAGATTTTAGCTGGAATTTTATTTGGATTTGTTTTGGGTTTCATTGTCTGTTTATTTGCAGCTACTATAGGG GCAATGCTAGCTTTTTTATTTATAAAATATAATTGGGGTGAAGCATCTACTAACCCAAAATATAAAATTATTTCTAAATT TAAATCTTTAGTTGAGAATCATCCTATAACTATACTTTTTGTCGCAAGATTATTGCCGATACCTTTTTTTGTGCCAAATA TCTTGGCAGGTATCTTAAAAGTTAAAAATAGCATTTTTTTTACTACTACTTTGTTTGGCATAATACCCGTGACATCTATT TATGTTTGGTTTGGAGTACATTTCAAAGAAGCTGTGATTCAAGGAAATAAAGAAAACTTTATTGATACTAAGTTTGTTGT AGCTTTGAGTATCTTAGGATTATTAACTTTGTTGGCATTATATGTAGCAAATAAATATACCAATAGGAAAATATAA
Upstream 100 bases:
>100_bases AATAAAATAAATCTTTTTTTCAAAAAAATTTGTGAAACATCTAAACTTCTTACTTATTAAAAGAATTTTTTTGATATTTT TTTTAAGTTTTGGGGTATTA
Downstream 100 bases:
>100_bases AAGTATAAATTGCTATAACATTATTGTAAAGTTTAGAAATTATAATTAATATTATTATTTATCATTAAATATAAATTATA GATTAATTATGATAAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: SNARE Associated Golgi Protein; SNARE Associated Golgi Protein-Like Protein; Dihydrolipoamide Dehydrogenase; SNARE Associated Golgi Protein-Related Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; SNARE-Associated Family Membrane Protein; tRNA Uridine 5-Carboxymethylaminomethyl GidA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MFLIFNGYKYFDVDKLNLAYIKVSAYVDSHIILACLSYACVYILTVFFSVPVKPFLKILAGILFGFVLGFIVCLFAATIG AMLAFLFIKYNWGEASTNPKYKIISKFKSLVENHPITILFVARLLPIPFFVPNILAGILKVKNSIFFTTTLFGIIPVTSI YVWFGVHFKEAVIQGNKENFIDTKFVVALSILGLLTLLALYVANKYTNRKI
Sequences:
>Translated_211_residues MFLIFNGYKYFDVDKLNLAYIKVSAYVDSHIILACLSYACVYILTVFFSVPVKPFLKILAGILFGFVLGFIVCLFAATIG AMLAFLFIKYNWGEASTNPKYKIISKFKSLVENHPITILFVARLLPIPFFVPNILAGILKVKNSIFFTTTLFGIIPVTSI YVWFGVHFKEAVIQGNKENFIDTKFVVALSILGLLTLLALYVANKYTNRKI >Mature_211_residues MFLIFNGYKYFDVDKLNLAYIKVSAYVDSHIILACLSYACVYILTVFFSVPVKPFLKILAGILFGFVLGFIVCLFAATIG AMLAFLFIKYNWGEASTNPKYKIISKFKSLVENHPITILFVARLLPIPFFVPNILAGILKVKNSIFFTTTLFGIIPVTSI YVWFGVHFKEAVIQGNKENFIDTKFVVALSILGLLTLLALYVANKYTNRKI
Specific function: Unknown
COG id: COG0398
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23797; Mature: 23797
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLIFNGYKYFDVDKLNLAYIKVSAYVDSHIILACLSYACVYILTVFFSVPVKPFLKILA CEEEECCEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH GILFGFVLGFIVCLFAATIGAMLAFLFIKYNWGEASTNPKYKIISKFKSLVENHPITILF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH VARLLPIPFFVPNILAGILKVKNSIFFTTTLFGIIPVTSIYVWFGVHFKEAVIQGNKENF HHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC IDTKFVVALSILGLLTLLALYVANKYTNRKI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFLIFNGYKYFDVDKLNLAYIKVSAYVDSHIILACLSYACVYILTVFFSVPVKPFLKILA CEEEECCEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH GILFGFVLGFIVCLFAATIGAMLAFLFIKYNWGEASTNPKYKIISKFKSLVENHPITILF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH VARLLPIPFFVPNILAGILKVKNSIFFTTTLFGIIPVTSIYVWFGVHFKEAVIQGNKENF HHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC IDTKFVVALSILGLLTLLALYVANKYTNRKI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA