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The map label for this gene is ycaR [C]

Identifier: 89256693

GI number: 89256693

Start: 1329940

End: 1330188

Strand: Reverse

Name: ycaR [C]

Synonym: FTL_1400

Alternate gene names: 89256693

Gene position: 1330188-1329940 (Counterclockwise)

Preceding gene: 89256694

Following gene: 89256692

Centisome position: 70.16

GC content: 29.32

Gene sequence:

>249_bases
ATGCTTGTCAAAGTAGATCATCTAGGAGATAAGTATTCAATTTATAACAGAGGTGAAATAATGGATCATTCAGTTTTAAA
TGTGTTGGTTTGCCCAATTTGTAAGGCAAATTTATATTATGATAAAGAAAATCAAGTTTTAGTATGTAAAGCAGATAAAT
TGGCTTATCCAATTCGTGAAAATATACCAGTAATGTTGGTTGAAGAAGCTAAAAAAATGACTCTTGAAGAGGTGAAAAAA
TATGGCTAA

Upstream 100 bases:

>100_bases
TAATGCACTAAGATCTATGTATTTAGGAGAGCAATAAAAGTAATATGTACTAATCTTGCTACGATTCATGATATCCTAGT
ATTCTAAGATAAATGACTAT

Downstream 100 bases:

>100_bases
TATTCATATTGTAATTCCTGCCAGGCTTAAATCAACTCGTCTACCAAATAAAATGCTGGCAGATATTGCCGGTAAGCCAA
TGATTCAGAGAGTCTATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MLVKVDHLGDKYSIYNRGEIMDHSVLNVLVCPICKANLYYDKENQVLVCKADKLAYPIRENIPVMLVEEAKKMTLEEVKK
YG

Sequences:

>Translated_82_residues
MLVKVDHLGDKYSIYNRGEIMDHSVLNVLVCPICKANLYYDKENQVLVCKADKLAYPIRENIPVMLVEEAKKMTLEEVKK
YG
>Mature_82_residues
MLVKVDHLGDKYSIYNRGEIMDHSVLNVLVCPICKANLYYDKENQVLVCKADKLAYPIRENIPVMLVEEAKKMTLEEVKK
YG

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family [H]

Homologues:

Organism=Escherichia coli, GI1787146, Length=60, Percent_Identity=46.6666666666667, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005651 [H]

Pfam domain/function: PF03966 Trm112p [H]

EC number: NA

Molecular weight: Translated: 9475; Mature: 9475

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVKVDHLGDKYSIYNRGEIMDHSVLNVLVCPICKANLYYDKENQVLVCKADKLAYPIRE
CEEEECCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCCCC
NIPVMLVEEAKKMTLEEVKKYG
CCCEEEECCHHHCCHHHHHHCC
>Mature Secondary Structure
MLVKVDHLGDKYSIYNRGEIMDHSVLNVLVCPICKANLYYDKENQVLVCKADKLAYPIRE
CEEEECCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCCCC
NIPVMLVEEAKKMTLEEVKKYG
CCCEEEECCHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA