| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256691
Identifier: 89256691
GI number: 89256691
Start: 1328807
End: 1329202
Strand: Reverse
Name: 89256691
Synonym: FTL_1398
Alternate gene names: NA
Gene position: 1329202-1328807 (Counterclockwise)
Preceding gene: 89256692
Following gene: 89256688
Centisome position: 70.11
GC content: 31.57
Gene sequence:
>396_bases ATGTTTAAATTAGACTCTCGTTTAGCAGCCGATACTTTTGAAGTTTGTGAGCATTTGGATTGTAAAATTTTAGTAATGAA TAATTCTATTGTACCTTGGTTTATAGTAGTACCTTTTACAGATAGAACAGAGTGGTATCAGCTTGATGATTCACAACAGT ATAATATCAATAAGATTATTAATAAATTATCTGATTTTATAGTCAAAGAATACAATGCTGATAAGCTAAATGTTGCTACT ATTGGAAATGTTGTTAGGCAAATGCATATTCATGTAGTGGGGCGTTTTGAGAGTGATCCAGTATGGCCAGCTCCTGTATG GGGTAATATTGAGCCTAAAGCATATACAGATCAAGAAAAAAATAAGCTACGAGAAAAAGTTAGGAGTATATTTTAA
Upstream 100 bases:
>100_bases TTATATAATGGTTACAAAATCGCTATTGAGCAATCAGCTAAATCAACTCCTGCTGGTGTTGATACATTGCAAGATTTAGA AAAAGTAAGGAAATTATTTA
Downstream 100 bases:
>100_bases AGTTTACAAGTTCCTTGGCAAGCTTTTGAAATATAGAAAGAAGGTTTTATATTAAATTTTTCAAAATAATTTTTCTCTAG GTAGCTAGCATACTCTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; Histidine Triad Domain Protein; Diadenosine Tetraphosphate Hydrolase; Histidine Triad; HIT Hydrolase; Pectate Lyase/Amb Allergen; HIT Domain-Containing Protein; HIT Family Protein; Diadenosine Tetraphosphate; Diadenosine Tetraphosphate Hydrolase-Like Protein
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MFKLDSRLAADTFEVCEHLDCKILVMNNSIVPWFIVVPFTDRTEWYQLDDSQQYNINKIINKLSDFIVKEYNADKLNVAT IGNVVRQMHIHVVGRFESDPVWPAPVWGNIEPKAYTDQEKNKLREKVRSIF
Sequences:
>Translated_131_residues MFKLDSRLAADTFEVCEHLDCKILVMNNSIVPWFIVVPFTDRTEWYQLDDSQQYNINKIINKLSDFIVKEYNADKLNVAT IGNVVRQMHIHVVGRFESDPVWPAPVWGNIEPKAYTDQEKNKLREKVRSIF >Mature_131_residues MFKLDSRLAADTFEVCEHLDCKILVMNNSIVPWFIVVPFTDRTEWYQLDDSQQYNINKIINKLSDFIVKEYNADKLNVAT IGNVVRQMHIHVVGRFESDPVWPAPVWGNIEPKAYTDQEKNKLREKVRSIF
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15388; Mature: 15388
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKLDSRLAADTFEVCEHLDCKILVMNNSIVPWFIVVPFTDRTEWYQLDDSQQYNINKII CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCEEECCCCCCCCHHHHH NKLSDFIVKEYNADKLNVATIGNVVRQMHIHVVGRFESDPVWPAPVWGNIEPKAYTDQEK HHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCHHH NKLREKVRSIF HHHHHHHHHCC >Mature Secondary Structure MFKLDSRLAADTFEVCEHLDCKILVMNNSIVPWFIVVPFTDRTEWYQLDDSQQYNINKII CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCEEECCCCCCCCHHHHH NKLSDFIVKEYNADKLNVATIGNVVRQMHIHVVGRFESDPVWPAPVWGNIEPKAYTDQEK HHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCHHH NKLREKVRSIF HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA