| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is gmk [H]
Identifier: 89256684
GI number: 89256684
Start: 1320932
End: 1321504
Strand: Reverse
Name: gmk [H]
Synonym: FTL_1391
Alternate gene names: 89256684
Gene position: 1321504-1320932 (Counterclockwise)
Preceding gene: 89256685
Following gene: 89256683
Centisome position: 69.7
GC content: 34.03
Gene sequence:
>573_bases ATGAATAACTATATTTTTATAATTTCTGCACCATCTGGCGCGGGTAAAAGTTCTTTATTAAAAGCTTTTTTAGCAACTGA CATAGGCAAGGATAACTACGCTGTAGCAATCTCCCACACTACTAGAGAGCCACGTGTTGGCGAGATCAATAGTAGAGAAT ATTATTTTGTCACAGTAGCTGAATTTGAACAATTACTTAGTCAAGATGGCTTTATTGAATATGCTAAAGTTTTCAAAAAC TATTATGGTACATCTAAAGCTGAGCTTGATAGATTGCTTGCATTAGGTAAGAATATTATCCTTGAGATTGACTGGCAAGG TGCACAACAAACACGCGCTATTTATGGCGATAGGGCTAAGAGTATATTTATATTACCGCCTTCTTTAGATGAGTTAAGAA AACGTCTAGAAAAAAGAAATACAGATTCTAAGGAGACTATAGATTATCGTATGGAGCAAGTACAATCAGAGATTTCACAT GCTGATGAATATGATTATCTGCTGGTTAACGATGATTTTAGCCAGTCATTAGAACAATTATGTAAATATTTCGAACAAAA TATCCAAAGTTAA
Upstream 100 bases:
>100_bases TAATAAATTACAAATAATTAATTTTCAAACACATTATTCTATTTATAGTTTTAAAACTGTATAATTAGTCGAACTAGCTA TTTGATTACGATTTCTACAA
Downstream 100 bases:
>100_bases AGGCTAAGGAGAACATTTGGATGTTAAACAAAAAACTTATAAAAGATAAGATATCACAAGCTAGACAAGAATTACCTAGT TTGAAAATTAAAGATACTGA
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MNNYIFIISAPSGAGKSSLLKAFLATDIGKDNYAVAISHTTREPRVGEINSREYYFVTVAEFEQLLSQDGFIEYAKVFKN YYGTSKAELDRLLALGKNIILEIDWQGAQQTRAIYGDRAKSIFILPPSLDELRKRLEKRNTDSKETIDYRMEQVQSEISH ADEYDYLLVNDDFSQSLEQLCKYFEQNIQS
Sequences:
>Translated_190_residues MNNYIFIISAPSGAGKSSLLKAFLATDIGKDNYAVAISHTTREPRVGEINSREYYFVTVAEFEQLLSQDGFIEYAKVFKN YYGTSKAELDRLLALGKNIILEIDWQGAQQTRAIYGDRAKSIFILPPSLDELRKRLEKRNTDSKETIDYRMEQVQSEISH ADEYDYLLVNDDFSQSLEQLCKYFEQNIQS >Mature_190_residues MNNYIFIISAPSGAGKSSLLKAFLATDIGKDNYAVAISHTTREPRVGEINSREYYFVTVAEFEQLLSQDGFIEYAKVFKN YYGTSKAELDRLLALGKNIILEIDWQGAQQTRAIYGDRAKSIFILPPSLDELRKRLEKRNTDSKETIDYRMEQVQSEISH ADEYDYLLVNDDFSQSLEQLCKYFEQNIQS
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874831, Length=187, Percent_Identity=35.2941176470588, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI226874833, Length=187, Percent_Identity=35.2941176470588, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI4504221, Length=187, Percent_Identity=35.2941176470588, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI38570142, Length=181, Percent_Identity=29.2817679558011, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI14780902, Length=186, Percent_Identity=25.2688172043011, Blast_Score=67, Evalue=7e-12, Organism=Homo sapiens, GI111154074, Length=168, Percent_Identity=27.9761904761905, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1790080, Length=176, Percent_Identity=52.8409090909091, Blast_Score=189, Evalue=9e-50, Organism=Caenorhabditis elegans, GI193203132, Length=188, Percent_Identity=29.2553191489362, Blast_Score=104, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17508835, Length=188, Percent_Identity=29.2553191489362, Blast_Score=104, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17557440, Length=182, Percent_Identity=26.3736263736264, Blast_Score=64, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320662, Length=176, Percent_Identity=40.9090909090909, Blast_Score=150, Evalue=1e-37, Organism=Drosophila melanogaster, GI21356141, Length=170, Percent_Identity=37.6470588235294, Blast_Score=109, Evalue=1e-24, Organism=Drosophila melanogaster, GI85724806, Length=182, Percent_Identity=26.3736263736264, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24640542, Length=182, Percent_Identity=26.3736263736264, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI116007136, Length=182, Percent_Identity=26.3736263736264, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI45554489, Length=182, Percent_Identity=26.3736263736264, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI45554481, Length=182, Percent_Identity=26.3736263736264, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI161077626, Length=182, Percent_Identity=26.3736263736264, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 21866; Mature: 21866
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNYIFIISAPSGAGKSSLLKAFLATDIGKDNYAVAISHTTREPRVGEINSREYYFVTVA CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEHH EFEQLLSQDGFIEYAKVFKNYYGTSKAELDRLLALGKNIILEIDWQGAQQTRAIYGDRAK HHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCC SIFILPPSLDELRKRLEKRNTDSKETIDYRMEQVQSEISHADEYDYLLVNDDFSQSLEQL EEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHH CKYFEQNIQS HHHHHHHCCC >Mature Secondary Structure MNNYIFIISAPSGAGKSSLLKAFLATDIGKDNYAVAISHTTREPRVGEINSREYYFVTVA CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEHH EFEQLLSQDGFIEYAKVFKNYYGTSKAELDRLLALGKNIILEIDWQGAQQTRAIYGDRAK HHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCC SIFILPPSLDELRKRLEKRNTDSKETIDYRMEQVQSEISHADEYDYLLVNDDFSQSLEQL EEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHH CKYFEQNIQS HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA