| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is 89256676
Identifier: 89256676
GI number: 89256676
Start: 1311108
End: 1311755
Strand: Reverse
Name: 89256676
Synonym: FTL_1377
Alternate gene names: NA
Gene position: 1311755-1311108 (Counterclockwise)
Preceding gene: 89256677
Following gene: 89256675
Centisome position: 69.19
GC content: 30.09
Gene sequence:
>648_bases ATGAAAACAGATAAAGTTATAGTTTTAGTGCATGGATTTATCAAAAATGCTAAAGATATGCGTAGTTTAGTAAGTTATCT AAAGCAGGATTATGATGATATTGTAGCTGTGGATTTACCAACTACATTTGTAAGTATGGATGTTGCAGTTAGCAAACTTT GTCAAATTATACAAAATATCCCAAAGACAAAATCTATCACTTTTATAGCACATAGTATGGGTGGTATATTAGTTTGCAAG TGTATAGATAAACTGCAACTTGATAATATAGATAAATGTGTATTTATAGCGACACCATTTGCAGGGTCAAAAGTTGCTGA TTTCGGCGATAGAATTCCATTTTATTCTAGGATACTAAAACCAAATAAAGAATTAAAAATTACTGATGACTACCTTGAGA TTTGTAATAAAGTTGCAGCTATGGTTCCAATAGGTCTAATTGCAGGAAATAAACACTCAAAATTTAATCTATTAGCTAAA TTTTGTCTAAAAAATGATCATGATGGTTTGGTTGAAGTAGCATCTGTTTTTGCGGTAAATAGTGCAGATAGGATTGTCTT ATACAAAAACCACTGCAAGATTCATCATGATGATGAGACACTAAGTAAAATAGCTTGTTTTTTACAAACTGGTAAATTTA AAATCTAA
Upstream 100 bases:
>100_bases CAAAGATTTGTATAGTGATTATATTACTTTTAATGAGCCTAATATTATCCTTAAAGATAATCTACGAGGATTTGGTTTTA GTTTTTAGAAATATTTATAA
Downstream 100 bases:
>100_bases TCAAATACAATTAAGCTAGAATAAATTCTTGTGTTGGGAATGAAGTACTATTCCTTGAGTTTATTTGATGAGCAAGAGCA GCAAAACTAGTTGAGATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MKTDKVIVLVHGFIKNAKDMRSLVSYLKQDYDDIVAVDLPTTFVSMDVAVSKLCQIIQNIPKTKSITFIAHSMGGILVCK CIDKLQLDNIDKCVFIATPFAGSKVADFGDRIPFYSRILKPNKELKITDDYLEICNKVAAMVPIGLIAGNKHSKFNLLAK FCLKNDHDGLVEVASVFAVNSADRIVLYKNHCKIHHDDETLSKIACFLQTGKFKI
Sequences:
>Translated_215_residues MKTDKVIVLVHGFIKNAKDMRSLVSYLKQDYDDIVAVDLPTTFVSMDVAVSKLCQIIQNIPKTKSITFIAHSMGGILVCK CIDKLQLDNIDKCVFIATPFAGSKVADFGDRIPFYSRILKPNKELKITDDYLEICNKVAAMVPIGLIAGNKHSKFNLLAK FCLKNDHDGLVEVASVFAVNSADRIVLYKNHCKIHHDDETLSKIACFLQTGKFKI >Mature_215_residues MKTDKVIVLVHGFIKNAKDMRSLVSYLKQDYDDIVAVDLPTTFVSMDVAVSKLCQIIQNIPKTKSITFIAHSMGGILVCK CIDKLQLDNIDKCVFIATPFAGSKVADFGDRIPFYSRILKPNKELKITDDYLEICNKVAAMVPIGLIAGNKHSKFNLLAK FCLKNDHDGLVEVASVFAVNSADRIVLYKNHCKIHHDDETLSKIACFLQTGKFKI
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23996; Mature: 23996
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTDKVIVLVHGFIKNAKDMRSLVSYLKQDYDDIVAVDLPTTFVSMDVAVSKLCQIIQNI CCCCCEEEEEEHHHCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCC PKTKSITFIAHSMGGILVCKCIDKLQLDNIDKCVFIATPFAGSKVADFGDRIPFYSRILK CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCHHHHHHHC PNKELKITDDYLEICNKVAAMVPIGLIAGNKHSKFNLLAKFCLKNDHDGLVEVASVFAVN CCCCEEEEHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCC SADRIVLYKNHCKIHHDDETLSKIACFLQTGKFKI CCCEEEEEECCCEEECCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKTDKVIVLVHGFIKNAKDMRSLVSYLKQDYDDIVAVDLPTTFVSMDVAVSKLCQIIQNI CCCCCEEEEEEHHHCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCC PKTKSITFIAHSMGGILVCKCIDKLQLDNIDKCVFIATPFAGSKVADFGDRIPFYSRILK CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCHHHHHHHC PNKELKITDDYLEICNKVAAMVPIGLIAGNKHSKFNLLAKFCLKNDHDGLVEVASVFAVN CCCCEEEEHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCC SADRIVLYKNHCKIHHDDETLSKIACFLQTGKFKI CCCEEEEEECCCEEECCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA