Click here to switch to the map view.

The map label for this gene is ydfM [H]

Identifier: 89256657

GI number: 89256657

Start: 1291156

End: 1292295

Strand: Reverse

Name: ydfM [H]

Synonym: FTL_1358

Alternate gene names: 89256657

Gene position: 1292295-1291156 (Counterclockwise)

Preceding gene: 89256658

Following gene: 89256656

Centisome position: 68.16

GC content: 32.37

Gene sequence:

>1140_bases
ATGTCAGATAACAGATATCAAATTACCAAGAAAGTTACTCTTGTTGGTATGTTTATAAACGCTTTGCTTGCTATATCTAA
AACTCTAATAGGAGTAATAGGGCGTTCACCAGCATTATTTGCTGATGGTATACATTCATTTTCTGATCTTTTAAGTGATT
TCATGGTTTTATTTGCAGCAAAATATGCAAATAAAGGCGAAGATCATAATCATCCGTATGGGCATGAGCGACTAGAAACT
TTAGCAACGTTGGTATTATCAGGACTATTGATAACTATTGGTTTTATGATTGTTTATCATTCTCTTGTGAGCTTACTCGG
TGGTGAGTATGTTATACCAGATAAGTTTACTGTCTATGCTGCTATTTTCTCGATTTTTGGTAATGAATTTATCTATCAAT
ATACAATGCGAGCCGCAAATAAGATTGATTCTGATTTACTAAGAGCTAATGCTTGGCATAGCCGTTCTGATATGTGGTCT
TCGGTAGTAGTATTAGTCGGCTTATTTGGAGCTTTTTTGGGCTTTGCTTGGATGGATGCTATTGCAGCGTTTATCGTCTG
CTTTATGATTGTTAAAATGGGAGTTAAATGGGGATACTCTGCTGTTGCTGAGCTTATAGATGAAGGTGTTGATGATCAAA
CACGCCAAGATATTAAAGCAATAATTGCAAAAACTCAAGGTGTTGAAGATTTTCATTATCTTCGTACTAGAAAAATGGCG
GGAAAAATTGTCCTAGATGTACATATTTTAGTAGATAAGTTTAGTACAGCATCAGAAGGACACTATATTGCAGAAATAGT
CAAAAGTAATATTTATCATAACATTGATAATATAAAAGATATAACGGTACATATAGATGTTACAAATCATGAAAGTGGGG
TTATTAAGCAAGAGAATTTTGAACCATCTCGTGCTGAGATATTGACTAAAATAAAAGAGTTCTTTGCTGAAAATAACATT
GATGAAAATGTTATTTTAGATAAGAAAATGTCAATATATTATTTTGATGATGAGATTTTGGTAGATCTATATGTCAAAAG
ATCTAACGATCTAAAAAGACTCTCAGATAAGTTGAGTAAACTTTCTTACAGGGGTTATAATATTTGTGTTACATTATATT
GTAATCTAGCTAATAGCTAA

Upstream 100 bases:

>100_bases
TAGAGATTAGTCATATTTTTACTATTATCAATAGACTTTAATCATTCTAAGTATTATTATCTTGTTAAAAATCTATCTAT
AACCCAATACGAGGTTAAAA

Downstream 100 bases:

>100_bases
TCTACAAGGAGCTAAAATGAAAATAAGAAAAGCAGTTTTTCCTGTAGCTGGATGGGGCACTAGATTTTTACCAGCTACTA
AATCATGTCCTAAAGAAATG

Product: cation-efflux family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MSDNRYQITKKVTLVGMFINALLAISKTLIGVIGRSPALFADGIHSFSDLLSDFMVLFAAKYANKGEDHNHPYGHERLET
LATLVLSGLLITIGFMIVYHSLVSLLGGEYVIPDKFTVYAAIFSIFGNEFIYQYTMRAANKIDSDLLRANAWHSRSDMWS
SVVVLVGLFGAFLGFAWMDAIAAFIVCFMIVKMGVKWGYSAVAELIDEGVDDQTRQDIKAIIAKTQGVEDFHYLRTRKMA
GKIVLDVHILVDKFSTASEGHYIAEIVKSNIYHNIDNIKDITVHIDVTNHESGVIKQENFEPSRAEILTKIKEFFAENNI
DENVILDKKMSIYYFDDEILVDLYVKRSNDLKRLSDKLSKLSYRGYNICVTLYCNLANS

Sequences:

>Translated_379_residues
MSDNRYQITKKVTLVGMFINALLAISKTLIGVIGRSPALFADGIHSFSDLLSDFMVLFAAKYANKGEDHNHPYGHERLET
LATLVLSGLLITIGFMIVYHSLVSLLGGEYVIPDKFTVYAAIFSIFGNEFIYQYTMRAANKIDSDLLRANAWHSRSDMWS
SVVVLVGLFGAFLGFAWMDAIAAFIVCFMIVKMGVKWGYSAVAELIDEGVDDQTRQDIKAIIAKTQGVEDFHYLRTRKMA
GKIVLDVHILVDKFSTASEGHYIAEIVKSNIYHNIDNIKDITVHIDVTNHESGVIKQENFEPSRAEILTKIKEFFAENNI
DENVILDKKMSIYYFDDEILVDLYVKRSNDLKRLSDKLSKLSYRGYNICVTLYCNLANS
>Mature_378_residues
SDNRYQITKKVTLVGMFINALLAISKTLIGVIGRSPALFADGIHSFSDLLSDFMVLFAAKYANKGEDHNHPYGHERLETL
ATLVLSGLLITIGFMIVYHSLVSLLGGEYVIPDKFTVYAAIFSIFGNEFIYQYTMRAANKIDSDLLRANAWHSRSDMWSS
VVVLVGLFGAFLGFAWMDAIAAFIVCFMIVKMGVKWGYSAVAELIDEGVDDQTRQDIKAIIAKTQGVEDFHYLRTRKMAG
KIVLDVHILVDKFSTASEGHYIAEIVKSNIYHNIDNIKDITVHIDVTNHESGVIKQENFEPSRAEILTKIKEFFAENNID
ENVILDKKMSIYYFDDEILVDLYVKRSNDLKRLSDKLSKLSYRGYNICVTLYCNLANS

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=251, Percent_Identity=23.1075697211155, Blast_Score=83, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6325032, Length=260, Percent_Identity=30, Blast_Score=120, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6323831, Length=243, Percent_Identity=32.0987654320988, Blast_Score=113, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 42814; Mature: 42683

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCEEEEEEEEECCCC
>Mature Secondary Structure 
SDNRYQITKKVTLVGMFINALLAISKTLIGVIGRSPALFADGIHSFSDLLSDFMVLFAA
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KYANKGEDHNHPYGHERLETLATLVLSGLLITIGFMIVYHSLVSLLGGEYVIPDKFTVYA
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHH
AIFSIFGNEFIYQYTMRAANKIDSDLLRANAWHSRSDMWSSVVVLVGLFGAFLGFAWMDA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IAAFIVCFMIVKMGVKWGYSAVAELIDEGVDDQTRQDIKAIIAKTQGVEDFHYLRTRKMA
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
GKIVLDVHILVDKFSTASEGHYIAEIVKSNIYHNIDNIKDITVHIDVTNHESGVIKQENF
CHHEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCC
EPSRAEILTKIKEFFAENNIDENVILDKKMSIYYFDDEILVDLYVKRSNDLKRLSDKLSK
CCHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEECCCEEEEEEECCCCHHHHHHHHHHH
LSYRGYNICVTLYCNLANS
HHCCCCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]