Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is yjeE [H]
Identifier: 89256616
GI number: 89256616
Start: 1245347
End: 1245724
Strand: Reverse
Name: yjeE [H]
Synonym: FTL_1307
Alternate gene names: 89256616
Gene position: 1245724-1245347 (Counterclockwise)
Preceding gene: 89256617
Following gene: 89256615
Centisome position: 65.7
GC content: 34.13
Gene sequence:
>378_bases ATGTATCAACTTGCCAAAGAGTATGCTCAACAGCTAAAGCCTGGTCAGATTATCTATTTGTATGGTGATTTAGGTGCGGG TAAAACTACGTTTGTCAAAGGTATACTCAATGCACTTGGTTATACTGGTAACGTTAAAAGTCCCACTTATACTCTAGTTG AGAGTTATGAGTTTGACAAATTTGATATTTATCATTTTGACTTATATAGGTTGGCTGACCCAGAAGAGTTAGAATGGATA GGTGCACGTGATTGTTTCAATCAAAAAGATATTTGTTTTATTGAGTGGCCTGAGAAAGGTAAAGGTTTTTTACCATTAAA TACCACTAAGGTACATATAAAATATCTAGCTCAAGGTAGACAAGTAGATTTTTACTAA
Upstream 100 bases:
>100_bases GCAAAAAAAGATACTCTTACGGTAGTGTTTGGATCTTTTGTATTAGCAGGAGAATTTATAAGACATTATGAAAAGTATAC TAGTAAATGATGAAGAGCAA
Downstream 100 bases:
>100_bases AAATCTCTATAAATCTTATGCAAAAGTGTATTATACTTTTAAAAATGTGACGCTTGATGTTTTTGTATTGCAGGAGAAAT AGATGAAAGCTAAATTTATA
Product: nucleotide-binding protein, yjeE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MYQLAKEYAQQLKPGQIIYLYGDLGAGKTTFVKGILNALGYTGNVKSPTYTLVESYEFDKFDIYHFDLYRLADPEELEWI GARDCFNQKDICFIEWPEKGKGFLPLNTTKVHIKYLAQGRQVDFY
Sequences:
>Translated_125_residues MYQLAKEYAQQLKPGQIIYLYGDLGAGKTTFVKGILNALGYTGNVKSPTYTLVESYEFDKFDIYHFDLYRLADPEELEWI GARDCFNQKDICFIEWPEKGKGFLPLNTTKVHIKYLAQGRQVDFY >Mature_125_residues MYQLAKEYAQQLKPGQIIYLYGDLGAGKTTFVKGILNALGYTGNVKSPTYTLVESYEFDKFDIYHFDLYRLADPEELEWI GARDCFNQKDICFIEWPEKGKGFLPLNTTKVHIKYLAQGRQVDFY
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=119, Percent_Identity=58.8235294117647, Blast_Score=152, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 14525; Mature: 14525
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQLAKEYAQQLKPGQIIYLYGDLGAGKTTFVKGILNALGYTGNVKSPTYTLVESYEFDK CCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCC FDIYHFDLYRLADPEELEWIGARDCFNQKDICFIEWPEKGKGFLPLNTTKVHIKYLAQGR EEEEEEEEEECCCCCCEEEECCCCCCCCCCEEEEECCCCCCCEECCCCCEEEEEEEECCC QVDFY EECCC >Mature Secondary Structure MYQLAKEYAQQLKPGQIIYLYGDLGAGKTTFVKGILNALGYTGNVKSPTYTLVESYEFDK CCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCC FDIYHFDLYRLADPEELEWIGARDCFNQKDICFIEWPEKGKGFLPLNTTKVHIKYLAQGR EEEEEEEEEECCCCCCEEEECCCCCCCCCCEEEEECCCCCCCEECCCCCEEEEEEEECCC QVDFY EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]