| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256589
Identifier: 89256589
GI number: 89256589
Start: 1220421
End: 1220603
Strand: Direct
Name: 89256589
Synonym: FTL_1280
Alternate gene names: NA
Gene position: 1220421-1220603 (Clockwise)
Preceding gene: 89256588
Following gene: 89256590
Centisome position: 64.37
GC content: 33.88
Gene sequence:
>183_bases ATGTCAGTTAAAAATAAAGTGACTTTAATTACCGGAGCTGCATCAGGTCTTGGACTAGGTATGGCAACAGAATTTGCAAA ACAAGGCGCTAAAGTAGTAATCGCAGATTTAGATATTGAAAAATCACAAGCTGTAGCAAAAGATTTAGCAGATAAATATA CTGTAGAAACTTTAGCTGTATAA
Upstream 100 bases:
>100_bases AGAAATTGTCAAAGGTTTTCACTTTATCGCTGATGTCACATTAGGTTTTGGTGAAGTGGTTTTTGATTACCTTAAATAAA ATATTTCAAGGAGATTTTAA
Downstream 100 bases:
>100_bases ATGGATGTTACAAATGAAGACCAAGTGAAATCCGGTGTAGATGAAACTGTCAAAAAATTTGGGCGTATTGATACTGTAAT TAATAACGCAGGTATTCAGA
Product: short-chain dehydrogenase/oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MSVKNKVTLITGAASGLGLGMATEFAKQGAKVVIADLDIEKSQAVAKDLADKYTVETLAV
Sequences:
>Translated_60_residues MSVKNKVTLITGAASGLGLGMATEFAKQGAKVVIADLDIEKSQAVAKDLADKYTVETLAV >Mature_59_residues SVKNKVTLITGAASGLGLGMATEFAKQGAKVVIADLDIEKSQAVAKDLADKYTVETLAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6181; Mature: 6050
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKNKVTLITGAASGLGLGMATEFAKQGAKVVIADLDIEKSQAVAKDLADKYTVETLAV CCCCCCEEEEEECCCCCCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHEEEECC >Mature Secondary Structure SVKNKVTLITGAASGLGLGMATEFAKQGAKVVIADLDIEKSQAVAKDLADKYTVETLAV CCCCCEEEEEECCCCCCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA