| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is dtpA [H]
Identifier: 89256569
GI number: 89256569
Start: 1195261
End: 1196802
Strand: Direct
Name: dtpA [H]
Synonym: FTL_1251
Alternate gene names: 89256569
Gene position: 1195261-1196802 (Clockwise)
Preceding gene: 89256568
Following gene: 89256571
Centisome position: 63.04
GC content: 35.15
Gene sequence:
>1542_bases GTGACTATTAGTGATGTGACTCATTCGAAAAATAATAATATTACACCATTTTGGGTTCTTTGGACTTTGGAGTTATGGGA GAGATTTGGTTATTATGGTCTACAAGCTATATTAGCTATATATTTTGCTAGAAAATTAGTTTTCAGTGATGCCGAAGCAA TGTTAATTTTTGGTTCTTTTTCGGCATTATTATATGGAGGTCCATTAATCGGTGGTTGGATTGGCGATAGCTACCTTGGT GCAAAGCGTACAATATTTATTGGCGCTGGGATTTTATTTTTATCATATATATCACTTAGTTTTAGTACATTTATTGCCGA GTATCTAGGCAGTACAGAAAAGACGGTTGTTATGTACTCACTAGCTGGTGTTGCTATTGGTGGGGGTCTCTTTAAAGCTA ACCCTACTTCTTTAATCTCTAAGTTATTTGAAAAAGGTGATCCTGCTTTAGATGGGGCTATGACACTATATTATATGGCT ATTAATATTGGTTCTTTTGTATCTATGCTTCTTACCCCTATAGTAGCGGCTAAATATGGTTATCTTCATGCTTTTTTATG TTCAGCTATTGGGATGTTTCTAGGATTAATTAGCTACACTATTTTCTATCCAAAAATTAAAAGAATCTCAACAGAAGCTG GTAGACAGAAGATGTCTTGGTTTAAGGTTTTTGTGGTACTTTTAGGAGCTTGTATAGCAATCTTTATAATAGGTAATATA CTTGAGAATACTACTTTGTGTACTAGTATAGTTGTTGTAATAGCGATACTTGCTTTGGTATATTTTTTTATACAAATGTT GAAACAAGCTGAGCATGAAAGAAAAAGGATGATTGTAGCTTTGATATTAATTATTCAAGGAATTATCTTCTTTGTATTGT ATCAGCAAATGCCTACTTCTCTTAATTTCTTTGCAGTTAATAATGTCGATCCTCACTTTTTAGGCATGAATGTACACGGT GAGCAATGGCAGGTACTTAATCCTCTAGTAATAGTATTAATGTCACCAATTCTATCGGTTGTGTATAAGAAAATACCTGG AACTCATGTCACAAAATTTTGTTTTGGTATGACTTTATGTGCATTAGCATTTTTAGTACTATACTTTCCACAATTTACCG CGACTAATGGTGTAGTATCTGGTTGGTGGTTAGTTGCAAGTTACTTCTTCCAATCTACTGGTGAGCTTCTAATCTCAGCA TTAGGTTTATCTATGGTTGCTGAACTATTCCCAAGAAATATGAGTGGTCTTGCACAAGGTATGTGGCTACTTACTACAAT GGTGGCTGGTCCAATTGGTGGTTATGTAGGTGCTTTGACAGCTCCAGCAGCAGGTACTGTATTTACGAAGGTCGAAGGAC TAGCTGTTTATGGTCATGTTTTTTTAACTATAGGTATTTTTGTCGCTGTAATTGCTGCTATTATGTGGATTGCTCGCGGA TGGCTAAATGCTATTATCGAGAGTACTAGAGTACATTTTGTATCAGAAGGTACTCATGGTATGCACGAAGAGACTGCTGT TTTACCTACACAAAATAATTAA
Upstream 100 bases:
>100_bases CTATTCATTTCTAATTGTTTTTAAGTTTTAAATGCTCTATGATGATTTTTTGACCTTTTTAAAAAGGTTAACTTATATTG TTTAAAATAGGAGAATAATT
Downstream 100 bases:
>100_bases TCTTTTGCCTTTGGTTTTCTAACACTTTTATTTTGATGTATTTTTTGTCTAATTTTTTTAGCAAAATCATTCTTATTAGA AGGTTTTTTGTTGTTATTGT
Product: proton-dependent oligopeptide transport (POT) family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MTISDVTHSKNNNITPFWVLWTLELWERFGYYGLQAILAIYFARKLVFSDAEAMLIFGSFSALLYGGPLIGGWIGDSYLG AKRTIFIGAGILFLSYISLSFSTFIAEYLGSTEKTVVMYSLAGVAIGGGLFKANPTSLISKLFEKGDPALDGAMTLYYMA INIGSFVSMLLTPIVAAKYGYLHAFLCSAIGMFLGLISYTIFYPKIKRISTEAGRQKMSWFKVFVVLLGACIAIFIIGNI LENTTLCTSIVVVIAILALVYFFIQMLKQAEHERKRMIVALILIIQGIIFFVLYQQMPTSLNFFAVNNVDPHFLGMNVHG EQWQVLNPLVIVLMSPILSVVYKKIPGTHVTKFCFGMTLCALAFLVLYFPQFTATNGVVSGWWLVASYFFQSTGELLISA LGLSMVAELFPRNMSGLAQGMWLLTTMVAGPIGGYVGALTAPAAGTVFTKVEGLAVYGHVFLTIGIFVAVIAAIMWIARG WLNAIIESTRVHFVSEGTHGMHEETAVLPTQNN
Sequences:
>Translated_513_residues MTISDVTHSKNNNITPFWVLWTLELWERFGYYGLQAILAIYFARKLVFSDAEAMLIFGSFSALLYGGPLIGGWIGDSYLG AKRTIFIGAGILFLSYISLSFSTFIAEYLGSTEKTVVMYSLAGVAIGGGLFKANPTSLISKLFEKGDPALDGAMTLYYMA INIGSFVSMLLTPIVAAKYGYLHAFLCSAIGMFLGLISYTIFYPKIKRISTEAGRQKMSWFKVFVVLLGACIAIFIIGNI LENTTLCTSIVVVIAILALVYFFIQMLKQAEHERKRMIVALILIIQGIIFFVLYQQMPTSLNFFAVNNVDPHFLGMNVHG EQWQVLNPLVIVLMSPILSVVYKKIPGTHVTKFCFGMTLCALAFLVLYFPQFTATNGVVSGWWLVASYFFQSTGELLISA LGLSMVAELFPRNMSGLAQGMWLLTTMVAGPIGGYVGALTAPAAGTVFTKVEGLAVYGHVFLTIGIFVAVIAAIMWIARG WLNAIIESTRVHFVSEGTHGMHEETAVLPTQNN >Mature_512_residues TISDVTHSKNNNITPFWVLWTLELWERFGYYGLQAILAIYFARKLVFSDAEAMLIFGSFSALLYGGPLIGGWIGDSYLGA KRTIFIGAGILFLSYISLSFSTFIAEYLGSTEKTVVMYSLAGVAIGGGLFKANPTSLISKLFEKGDPALDGAMTLYYMAI NIGSFVSMLLTPIVAAKYGYLHAFLCSAIGMFLGLISYTIFYPKIKRISTEAGRQKMSWFKVFVVLLGACIAIFIIGNIL ENTTLCTSIVVVIAILALVYFFIQMLKQAEHERKRMIVALILIIQGIIFFVLYQQMPTSLNFFAVNNVDPHFLGMNVHGE QWQVLNPLVIVLMSPILSVVYKKIPGTHVTKFCFGMTLCALAFLVLYFPQFTATNGVVSGWWLVASYFFQSTGELLISAL GLSMVAELFPRNMSGLAQGMWLLTTMVAGPIGGYVGALTAPAAGTVFTKVEGLAVYGHVFLTIGIFVAVIAAIMWIARGW LNAIIESTRVHFVSEGTHGMHEETAVLPTQNN
Specific function: Proton-dependent permease that transports di- and tripeptides [H]
COG id: COG3104
COG function: function code E; Dipeptide/tripeptide permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpA subfamily [H]
Homologues:
Organism=Homo sapiens, GI4827008, Length=376, Percent_Identity=25.531914893617, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI1787922, Length=462, Percent_Identity=43.9393939393939, Blast_Score=368, Evalue=1e-103, Organism=Escherichia coli, GI1789911, Length=485, Percent_Identity=40, Blast_Score=350, Evalue=9e-98, Organism=Escherichia coli, GI1790572, Length=471, Percent_Identity=26.1146496815287, Blast_Score=145, Evalue=5e-36, Organism=Escherichia coli, GI1786927, Length=475, Percent_Identity=24.2105263157895, Blast_Score=132, Evalue=7e-32, Organism=Caenorhabditis elegans, GI17541704, Length=390, Percent_Identity=25.1282051282051, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17569141, Length=167, Percent_Identity=26.9461077844311, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71987453, Length=167, Percent_Identity=28.7425149700599, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24639583, Length=330, Percent_Identity=27.2727272727273, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI24639585, Length=330, Percent_Identity=27.2727272727273, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI24639581, Length=329, Percent_Identity=27.0516717325228, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI28571098, Length=362, Percent_Identity=25.9668508287293, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI28571102, Length=362, Percent_Identity=25.9668508287293, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI28571100, Length=362, Percent_Identity=25.9668508287293, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR000109 - InterPro: IPR005279 - InterPro: IPR018456 [H]
Pfam domain/function: PF00854 PTR2 [H]
EC number: NA
Molecular weight: Translated: 56326; Mature: 56194
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISDVTHSKNNNITPFWVLWTLELWERFGYYGLQAILAIYFARKLVFSDAEAMLIFGSF CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHH SALLYGGPLIGGWIGDSYLGAKRTIFIGAGILFLSYISLSFSTFIAEYLGSTEKTVVMYS HHHHHCCCEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE LAGVAIGGGLFKANPTSLISKLFEKGDPALDGAMTLYYMAINIGSFVSMLLTPIVAAKYG HHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLHAFLCSAIGMFLGLISYTIFYPKIKRISTEAGRQKMSWFKVFVVLLGACIAIFIIGNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LENTTLCTSIVVVIAILALVYFFIQMLKQAEHERKRMIVALILIIQGIIFFVLYQQMPTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LNFFAVNNVDPHFLGMNVHGEQWQVLNPLVIVLMSPILSVVYKKIPGTHVTKFCFGMTLC EEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ALAFLVLYFPQFTATNGVVSGWWLVASYFFQSTGELLISALGLSMVAELFPRNMSGLAQG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH MWLLTTMVAGPIGGYVGALTAPAAGTVFTKVEGLAVYGHVFLTIGIFVAVIAAIMWIARG HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WLNAIIESTRVHFVSEGTHGMHEETAVLPTQNN HHHHHHHHHHHEEEECCCCCCCCCCEECCCCCC >Mature Secondary Structure TISDVTHSKNNNITPFWVLWTLELWERFGYYGLQAILAIYFARKLVFSDAEAMLIFGSF CCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHH SALLYGGPLIGGWIGDSYLGAKRTIFIGAGILFLSYISLSFSTFIAEYLGSTEKTVVMYS HHHHHCCCEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE LAGVAIGGGLFKANPTSLISKLFEKGDPALDGAMTLYYMAINIGSFVSMLLTPIVAAKYG HHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLHAFLCSAIGMFLGLISYTIFYPKIKRISTEAGRQKMSWFKVFVVLLGACIAIFIIGNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LENTTLCTSIVVVIAILALVYFFIQMLKQAEHERKRMIVALILIIQGIIFFVLYQQMPTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LNFFAVNNVDPHFLGMNVHGEQWQVLNPLVIVLMSPILSVVYKKIPGTHVTKFCFGMTLC EEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ALAFLVLYFPQFTATNGVVSGWWLVASYFFQSTGELLISALGLSMVAELFPRNMSGLAQG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH MWLLTTMVAGPIGGYVGALTAPAAGTVFTKVEGLAVYGHVFLTIGIFVAVIAAIMWIARG HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WLNAIIESTRVHFVSEGTHGMHEETAVLPTQNN HHHHHHHHHHHEEEECCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA