Click here to switch to the map view.

The map label for this gene is trkA [H]

Identifier: 89256551

GI number: 89256551

Start: 1179966

End: 1181339

Strand: Direct

Name: trkA [H]

Synonym: FTL_1232

Alternate gene names: 89256551

Gene position: 1179966-1181339 (Clockwise)

Preceding gene: 89256543

Following gene: 89256552

Centisome position: 62.23

GC content: 30.49

Gene sequence:

>1374_bases
ATGAGAATAGCCATTTTAGGAGCTGGGCAATTAGGCGTATATTTAACCCAAAGGCTTAGTTTAGACCATCAAGTTTCTGT
TATTGACCTAGATGAAGAAAAACTTGGTTTTATTTCATCAGCATTTGATGTCCAAACAATCATTGGTGATGTTACCAAAC
CAAACATTATGATGGAAGCTAATTTTAAAGATACTGATATGATAATAGCTGTGACATCAAATGATACTACAAATATAGCC
GTATGCGATATGGCTTATAAGTTGTATAAAACACCATATAAAATAGCCCGTATTCGTGACACTGAATATAATAGATTTCC
TAAACTTTTAAATAATATAGATTTAGTCATAAAGTCATTTTTTGAAACAACAAAAAGATTAGAACAATTAATCTTCTTGT
CTGGAGCATATTTTATATCAAGTTTTTTTGATAAGCGTGTTCAGATTGTTGGTGTTGAGGTTTCCTCAGACTCCCCTCTT
GTAGGACTTGCAGTTAAAGATATATATCTAGGTTTAGGTGATATCAAAGTTGATATTATCTCTGTATATAGAGGTAATGA
AAAATTAGATATTGATGATATTAATGTCTTAGTAAAGCCTGGGGATAGAGTTATGTACCTTTCCGAAAAAGCATATTCAT
CACAGATACTCTCAATATTTCAACCTAAAAAGACCAATATCAGAAAAATATTTATAGCAGGTATAAACTATGCAAGTATC
ACTTTAGCAAAATCTTTGGAGAGTAAAGGATATATTATTAAAATGATAGACCCAAGTGCAGAAAAATGTGAGTTTGCTTT
GAGTGAATTGTCTAAATCAACAATTTTACATTATAACCCTGTTAATAATAACCTACTGGTTGCTGAAGGTATAGATGAGG
CAGATATGTTTTTTGCTTTGACAAACTCTGATGAAATAAATATTATGTCATCAATTTTGGCAAAAAAACTTGGTGCTAAA
AAAACAGTCGCTACCGTTAATAGTTCTGAATACTACGATATTACAAGGGATCTAAAACTAATTGATATTTCTATTTCGCC
ACATAATTTTTCATATACAACAATCAAGGCATTTTTAACTCAAGTTGATATGCTAAGAATGTACGAAATCGAAGATAGCG
AAGAAATGCTTGTTGAGCTTAAAGTCCATGGTCAAGAAAACATGTCCACAGTTATTGGTAAAAAGATTAATGACTTAAAA
TTACCTCAAGGTCTAGAGATTATTGCAATAATGAAAATTGATAATATTCCAAGGTTTTATGCCGATAGTTTTCTAATACA
AGATCAAGATAGATTAATCATCAAAGTGGATAATAAAAATGCTCTACAAACCTTAGAAAAACTTTTTCAAGTAATGCCAT
TATACATCGCATAA

Upstream 100 bases:

>100_bases
TTATAAGGCTGAATGTAAATTAAAAATTTGATTATTTTATCACCTTAGATTAGTATGTTTAAACTTACATACTACATATA
TAGCATTATATCAATTAATT

Downstream 100 bases:

>100_bases
ATCATTGCCAATTTAGATATCCTTGAGTTATTATATATCTTAAACTATCCACTAACGTATGGCTATGACAGTAAATTCAT
CAGCAAAAGAAAAAATTGGT

Product: potassium transporter peripheral membrane component

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MRIAILGAGQLGVYLTQRLSLDHQVSVIDLDEEKLGFISSAFDVQTIIGDVTKPNIMMEANFKDTDMIIAVTSNDTTNIA
VCDMAYKLYKTPYKIARIRDTEYNRFPKLLNNIDLVIKSFFETTKRLEQLIFLSGAYFISSFFDKRVQIVGVEVSSDSPL
VGLAVKDIYLGLGDIKVDIISVYRGNEKLDIDDINVLVKPGDRVMYLSEKAYSSQILSIFQPKKTNIRKIFIAGINYASI
TLAKSLESKGYIIKMIDPSAEKCEFALSELSKSTILHYNPVNNNLLVAEGIDEADMFFALTNSDEINIMSSILAKKLGAK
KTVATVNSSEYYDITRDLKLIDISISPHNFSYTTIKAFLTQVDMLRMYEIEDSEEMLVELKVHGQENMSTVIGKKINDLK
LPQGLEIIAIMKIDNIPRFYADSFLIQDQDRLIIKVDNKNALQTLEKLFQVMPLYIA

Sequences:

>Translated_457_residues
MRIAILGAGQLGVYLTQRLSLDHQVSVIDLDEEKLGFISSAFDVQTIIGDVTKPNIMMEANFKDTDMIIAVTSNDTTNIA
VCDMAYKLYKTPYKIARIRDTEYNRFPKLLNNIDLVIKSFFETTKRLEQLIFLSGAYFISSFFDKRVQIVGVEVSSDSPL
VGLAVKDIYLGLGDIKVDIISVYRGNEKLDIDDINVLVKPGDRVMYLSEKAYSSQILSIFQPKKTNIRKIFIAGINYASI
TLAKSLESKGYIIKMIDPSAEKCEFALSELSKSTILHYNPVNNNLLVAEGIDEADMFFALTNSDEINIMSSILAKKLGAK
KTVATVNSSEYYDITRDLKLIDISISPHNFSYTTIKAFLTQVDMLRMYEIEDSEEMLVELKVHGQENMSTVIGKKINDLK
LPQGLEIIAIMKIDNIPRFYADSFLIQDQDRLIIKVDNKNALQTLEKLFQVMPLYIA
>Mature_457_residues
MRIAILGAGQLGVYLTQRLSLDHQVSVIDLDEEKLGFISSAFDVQTIIGDVTKPNIMMEANFKDTDMIIAVTSNDTTNIA
VCDMAYKLYKTPYKIARIRDTEYNRFPKLLNNIDLVIKSFFETTKRLEQLIFLSGAYFISSFFDKRVQIVGVEVSSDSPL
VGLAVKDIYLGLGDIKVDIISVYRGNEKLDIDDINVLVKPGDRVMYLSEKAYSSQILSIFQPKKTNIRKIFIAGINYASI
TLAKSLESKGYIIKMIDPSAEKCEFALSELSKSTILHYNPVNNNLLVAEGIDEADMFFALTNSDEINIMSSILAKKLGAK
KTVATVNSSEYYDITRDLKLIDISISPHNFSYTTIKAFLTQVDMLRMYEIEDSEEMLVELKVHGQENMSTVIGKKINDLK
LPQGLEIIAIMKIDNIPRFYADSFLIQDQDRLIIKVDNKNALQTLEKLFQVMPLYIA

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK N-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=462, Percent_Identity=29.2207792207792, Blast_Score=221, Evalue=6e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 51590; Mature: 51590

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAILGAGQLGVYLTQRLSLDHQVSVIDLDEEKLGFISSAFDVQTIIGDVTKPNIMMEA
CEEEEEECCCHHHHHHHHCCCCCEEEEEECCHHHHCHHHHHHHHHHHHCCCCCCCEEEEE
NFKDTDMIIAVTSNDTTNIAVCDMAYKLYKTPYKIARIRDTEYNRFPKLLNNIDLVIKSF
CCCCCEEEEEEECCCCCEEEEEHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH
FETTKRLEQLIFLSGAYFISSFFDKRVQIVGVEVSSDSPLVGLAVKDIYLGLGDIKVDII
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEEHHCCCCCEEEEEE
SVYRGNEKLDIDDINVLVKPGDRVMYLSEKAYSSQILSIFQPKKTNIRKIFIAGINYASI
EEEECCCEECCCCEEEEECCCCEEEEEECHHHHHHHHHHCCCCCCCEEEEEEEECCEEEE
TLAKSLESKGYIIKMIDPSAEKCEFALSELSKSTILHYNPVNNNLLVAEGIDEADMFFAL
EEEHHHCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCEEEEEE
TNSDEINIMSSILAKKLGAKKTVATVNSSEYYDITRDLKLIDISISPHNFSYTTIKAFLT
ECCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCEEEEEEEECCCCCCHHHHHHHHH
QVDMLRMYEIEDSEEMLVELKVHGQENMSTVIGKKINDLKLPQGLEIIAIMKIDNIPRFY
HHHHHEEEECCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHH
ADSFLIQDQDRLIIKVDNKNALQTLEKLFQVMPLYIA
HCCEEEECCCEEEEEECCCHHHHHHHHHHHHHCHHCC
>Mature Secondary Structure
MRIAILGAGQLGVYLTQRLSLDHQVSVIDLDEEKLGFISSAFDVQTIIGDVTKPNIMMEA
CEEEEEECCCHHHHHHHHCCCCCEEEEEECCHHHHCHHHHHHHHHHHHCCCCCCCEEEEE
NFKDTDMIIAVTSNDTTNIAVCDMAYKLYKTPYKIARIRDTEYNRFPKLLNNIDLVIKSF
CCCCCEEEEEEECCCCCEEEEEHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH
FETTKRLEQLIFLSGAYFISSFFDKRVQIVGVEVSSDSPLVGLAVKDIYLGLGDIKVDII
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEEHHCCCCCEEEEEE
SVYRGNEKLDIDDINVLVKPGDRVMYLSEKAYSSQILSIFQPKKTNIRKIFIAGINYASI
EEEECCCEECCCCEEEEECCCCEEEEEECHHHHHHHHHHCCCCCCCEEEEEEEECCEEEE
TLAKSLESKGYIIKMIDPSAEKCEFALSELSKSTILHYNPVNNNLLVAEGIDEADMFFAL
EEEHHHCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCEEEEEE
TNSDEINIMSSILAKKLGAKKTVATVNSSEYYDITRDLKLIDISISPHNFSYTTIKAFLT
ECCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCEEEEEEEECCCCCCHHHHHHHHH
QVDMLRMYEIEDSEEMLVELKVHGQENMSTVIGKKINDLKLPQGLEIIAIMKIDNIPRFY
HHHHHEEEECCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHH
ADSFLIQDQDRLIIKVDNKNALQTLEKLFQVMPLYIA
HCCEEEECCCEEEEEECCCHHHHHHHHHHHHHCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7948029; 9720051 [H]