Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
---|---|
Accession | NC_007880 |
Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is 89256532
Identifier: 89256532
GI number: 89256532
Start: 1159397
End: 1159972
Strand: Reverse
Name: 89256532
Synonym: FTL_1211
Alternate gene names: NA
Gene position: 1159972-1159397 (Counterclockwise)
Preceding gene: 89256533
Following gene: 89256531
Centisome position: 61.18
GC content: 30.9
Gene sequence:
>576_bases ATGATGAAAGTAAGATATATCCATACTATATTTTTGTTTATTTTATCAGTTGTGCTACTTGCTAGTTGTGGTTTTCATCC GCGTGGAGTCTTGAGTGATGGTAATGCAGGTAACTTTGATAGTTTAGTTGGTACTAAAGTTTATATTAAAGCTGATAATT TTGCTAATTTTGCTAATGCATTAAAACGTAATCTGACAAACTATAATGCAATTGTTGTTAATGATGAAAAATCTGCTGAT TATATTATAAATATCCAAGATGTTAAGCAAGAATCTCAATTAACAAGTATTGTTGGTGGTGCATCAAATAATACTTTCCA GCTGATATATACAGTAACTTATAATGTTGTTAAACCTGATGATAAGACTCCTGTAATACCAAATAGATCAATAAATGCTC AACAATTCTGGCAATCTAATTCTGGTACACAGCTTGCTCAAAATAATGAAGCTAATAGAATATATTCATATCTAGAGGGT CAACTAGTGAATAACATGGCTACTCAAGTTGCGGCGTTGTTACCAAGTAAAAATACAACTCAAGCATCAACTTCTAGTGA TAATTCGTTACAATAA
Upstream 100 bases:
>100_bases GCTGATGAACATGTCAAATCATTTATAGATAATAAACAAGTTGTTAAAGTAATTTATGTACCACAAAAACTTATTAATAT TGTAATTAAATAAGGTAAAT
Downstream 100 bases:
>100_bases ATTCAATAATTATTTTGTTTTATAATAACAATATCTAACTTAAAGGTAATATAAAATATAATGTCGTTACTAAAAAAATA CTATTTTGATATTATTAATA
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MMKVRYIHTIFLFILSVVLLASCGFHPRGVLSDGNAGNFDSLVGTKVYIKADNFANFANALKRNLTNYNAIVVNDEKSAD YIINIQDVKQESQLTSIVGGASNNTFQLIYTVTYNVVKPDDKTPVIPNRSINAQQFWQSNSGTQLAQNNEANRIYSYLEG QLVNNMATQVAALLPSKNTTQASTSSDNSLQ
Sequences:
>Translated_191_residues MMKVRYIHTIFLFILSVVLLASCGFHPRGVLSDGNAGNFDSLVGTKVYIKADNFANFANALKRNLTNYNAIVVNDEKSAD YIINIQDVKQESQLTSIVGGASNNTFQLIYTVTYNVVKPDDKTPVIPNRSINAQQFWQSNSGTQLAQNNEANRIYSYLEG QLVNNMATQVAALLPSKNTTQASTSSDNSLQ >Mature_191_residues MMKVRYIHTIFLFILSVVLLASCGFHPRGVLSDGNAGNFDSLVGTKVYIKADNFANFANALKRNLTNYNAIVVNDEKSAD YIINIQDVKQESQLTSIVGGASNNTFQLIYTVTYNVVKPDDKTPVIPNRSINAQQFWQSNSGTQLAQNNEANRIYSYLEG QLVNNMATQVAALLPSKNTTQASTSSDNSLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21034; Mature: 21034
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKVRYIHTIFLFILSVVLLASCGFHPRGVLSDGNAGNFDSLVGTKVYIKADNFANFANA CCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHH LKRNLTNYNAIVVNDEKSADYIINIQDVKQESQLTSIVGGASNNTFQLIYTVTYNVVKPD HHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCC DKTPVIPNRSINAQQFWQSNSGTQLAQNNEANRIYSYLEGQLVNNMATQVAALLPSKNTT CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QASTSSDNSLQ CCCCCCCCCCC >Mature Secondary Structure MMKVRYIHTIFLFILSVVLLASCGFHPRGVLSDGNAGNFDSLVGTKVYIKADNFANFANA CCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHH LKRNLTNYNAIVVNDEKSADYIINIQDVKQESQLTSIVGGASNNTFQLIYTVTYNVVKPD HHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCC DKTPVIPNRSINAQQFWQSNSGTQLAQNNEANRIYSYLEGQLVNNMATQVAALLPSKNTT CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QASTSSDNSLQ CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA