Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256523
Identifier: 89256523
GI number: 89256523
Start: 1151214
End: 1152203
Strand: Reverse
Name: 89256523
Synonym: FTL_1202
Alternate gene names: NA
Gene position: 1152203-1151214 (Counterclockwise)
Preceding gene: 89256524
Following gene: 89256520
Centisome position: 60.77
GC content: 30.2
Gene sequence:
>990_bases ATGCAAAAACTTAAAAGCACATCAAAAGCATTATTAATATTAGGATTAGGAACAACTATAACTATATTAGGAGCATGTTC AAATAATGATAAAAATAATGTTGATCCACTAGAGCTTTATAATAAAGTTACACAGCTAGAAGCTGCTTTTGATGAGCAAT ATGGAGATACGTTCAAATTACCAGAAAATGCAAATAAATGTGTTGCTGATATTACAAAAGACTCTAATGATTTTAAGTAT ATGGGTACTAAAAATGGTTATGATTATAGCCTAAATTCTCAATATGCAAAAACTGCTAAAAAATTAGTTGGTAGTCTAAA TAATCTGTTAAGTGAGTTTAAACAAATTGGCTTTATCAAAACTATAGAAAAAAATGGCAAACACCCTGCTATTATGTTTG ATATTGATAATACTCTTGAGTTAACATCTTTTAATGATGGCTATGATAGCAAAGGTACCAAACCAACTCCTTATATGGCT GATTTTGTTAAAAATCAATGCTTTAAAGATGGTGTTGACTGCTATTTTATAACTGCTAGATATTGCAATACTGCATCGGC AACTACTACAGCAAAATGGTTAAAGGTTAATCTAGATCTTACAGATGACCAGATTAATAAATATGTATTTTTATCAGGTT CAATTGACAATAGTCTTTGTGCAACAGGAGCAAATGATAAGGTTGCTTATAAAGATTCTTTTAGACAAGCACTATCAGAA CAAAGAAGCGTATACTGGCTAATGTCTATAGGTGACCAAATGACGGATTGGTATGGTTCTCACAGCGGTCTTAAAGTTAA ATTTCCTAACCAACTATTTCAAAGTAATATAGTGCCTAATAATTATGATAATCCTAGTAATTGTAGTATGATGACTGTAA CAGCCCCTACTCAAAGTTGCTATAATAGACTTAAATCGGGGATATTAGAACATGCTACAATCAATTATTGTAAGAATTTC AAAGATAATAAATATTATAGTGGTAATTAG
Upstream 100 bases:
>100_bases TATTTTTTTATTTGATAAAAGCTAATTAATATATTGCTTTTATAAATTATTATGTGTTTGTTTTTGATTTATTTAGTCAA ACTAAGGAGATATTACTATT
Downstream 100 bases:
>100_bases AATCTAAATTATTATTGATTTCTAAGTCCAAATAGCAACTATAGCCATAATTGTAAAGCCAATGATTACAAAACTATATT GCTTTGTATTACAACAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MQKLKSTSKALLILGLGTTITILGACSNNDKNNVDPLELYNKVTQLEAAFDEQYGDTFKLPENANKCVADITKDSNDFKY MGTKNGYDYSLNSQYAKTAKKLVGSLNNLLSEFKQIGFIKTIEKNGKHPAIMFDIDNTLELTSFNDGYDSKGTKPTPYMA DFVKNQCFKDGVDCYFITARYCNTASATTTAKWLKVNLDLTDDQINKYVFLSGSIDNSLCATGANDKVAYKDSFRQALSE QRSVYWLMSIGDQMTDWYGSHSGLKVKFPNQLFQSNIVPNNYDNPSNCSMMTVTAPTQSCYNRLKSGILEHATINYCKNF KDNKYYSGN
Sequences:
>Translated_329_residues MQKLKSTSKALLILGLGTTITILGACSNNDKNNVDPLELYNKVTQLEAAFDEQYGDTFKLPENANKCVADITKDSNDFKY MGTKNGYDYSLNSQYAKTAKKLVGSLNNLLSEFKQIGFIKTIEKNGKHPAIMFDIDNTLELTSFNDGYDSKGTKPTPYMA DFVKNQCFKDGVDCYFITARYCNTASATTTAKWLKVNLDLTDDQINKYVFLSGSIDNSLCATGANDKVAYKDSFRQALSE QRSVYWLMSIGDQMTDWYGSHSGLKVKFPNQLFQSNIVPNNYDNPSNCSMMTVTAPTQSCYNRLKSGILEHATINYCKNF KDNKYYSGN >Mature_329_residues MQKLKSTSKALLILGLGTTITILGACSNNDKNNVDPLELYNKVTQLEAAFDEQYGDTFKLPENANKCVADITKDSNDFKY MGTKNGYDYSLNSQYAKTAKKLVGSLNNLLSEFKQIGFIKTIEKNGKHPAIMFDIDNTLELTSFNDGYDSKGTKPTPYMA DFVKNQCFKDGVDCYFITARYCNTASATTTAKWLKVNLDLTDDQINKYVFLSGSIDNSLCATGANDKVAYKDSFRQALSE QRSVYWLMSIGDQMTDWYGSHSGLKVKFPNQLFQSNIVPNNYDNPSNCSMMTVTAPTQSCYNRLKSGILEHATINYCKNF KDNKYYSGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36897; Mature: 36897
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKLKSTSKALLILGLGTTITILGACSNNDKNNVDPLELYNKVTQLEAAFDEQYGDTFKL CCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECC PENANKCVADITKDSNDFKYMGTKNGYDYSLNSQYAKTAKKLVGSLNNLLSEFKQIGFIK CCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE TIEKNGKHPAIMFDIDNTLELTSFNDGYDSKGTKPTPYMADFVKNQCFKDGVDCYFITAR EHHCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE YCNTASATTTAKWLKVNLDLTDDQINKYVFLSGSIDNSLCATGANDKVAYKDSFRQALSE CCCCCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHH QRSVYWLMSIGDQMTDWYGSHSGLKVKFPNQLFQSNIVPNNYDNPSNCSMMTVTAPTQSC HCCEEEEEHHCCHHHHHHCCCCCEEEECCHHHHHCCCCCCCCCCCCCCEEEEEECCHHHH YNRLKSGILEHATINYCKNFKDNKYYSGN HHHHHHHHHHHHHHHHHHCCCCCCEECCC >Mature Secondary Structure MQKLKSTSKALLILGLGTTITILGACSNNDKNNVDPLELYNKVTQLEAAFDEQYGDTFKL CCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECC PENANKCVADITKDSNDFKYMGTKNGYDYSLNSQYAKTAKKLVGSLNNLLSEFKQIGFIK CCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE TIEKNGKHPAIMFDIDNTLELTSFNDGYDSKGTKPTPYMADFVKNQCFKDGVDCYFITAR EHHCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE YCNTASATTTAKWLKVNLDLTDDQINKYVFLSGSIDNSLCATGANDKVAYKDSFRQALSE CCCCCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHH QRSVYWLMSIGDQMTDWYGSHSGLKVKFPNQLFQSNIVPNNYDNPSNCSMMTVTAPTQSC HCCEEEEEHHCCHHHHHHCCCCCEEEECCHHHHHCCCCCCCCCCCCCCEEEEEECCHHHH YNRLKSGILEHATINYCKNFKDNKYYSGN HHHHHHHHHHHHHHHHHHCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA