| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is pheT [H]
Identifier: 89256519
GI number: 89256519
Start: 1146238
End: 1148610
Strand: Direct
Name: pheT [H]
Synonym: FTL_1198
Alternate gene names: 89256519
Gene position: 1146238-1148610 (Clockwise)
Preceding gene: 89256518
Following gene: 89256521
Centisome position: 60.46
GC content: 31.35
Gene sequence:
>2373_bases ATGAAATTTTCACACAATTGGTTAAATGAATATCTAGGTGATACTCAGGATAGCCAAAATCTAGCAGATACTTTAACTTT AGCTGGTTTAGAAGTAGATGCAATTGAACCGGTAGTCGCAGAAAAAGTTAGTGGTGTAGTAGTTGGACAAATTAAAACCA TTAATAAACATCCTGATGCAGATAAATTAAATGTTTGTAGTGTCGATGCAGGTGAAGATGAGTTGCTAACGATAGTTTGT GGTGCAAGTAATATTTACGAAGGTATGAAAGCTCCTGTTGCAAAAATTGGTGCGGTACTACCAGGTAATTTTAAAATCAA AAAATCTAAACTGCGTGGTCAAGAATCTTTTGGGATGATGTGCTCGGAAGAAGAGCTTGGCTTAGCTGAAAAAGCTGATG GTTTAATGGATTTACCTATAGATGCTCCGGTTGGTACTGATATAAATAAATATTTAAATTTAGATGATAATATTATCGAA GTTGATCTAACACCAAATAGAGCAGATTGCCTAAGTGTATATGGTATTGCTCGTGAAGTATCAGCATTAACAAAAACTGA ACTTAAAAACTTAGAAATACCAGAACCTAAAGTGGTGATAGATGATACTAAAGAAGTCAATATAACTGCTACAGATGCTT GTCATGCATACTATGGCTGTATTATCAAAAATGTCAATAATAAAATTCAAACACCTTTGTGGATGGTTGAAAAACTAAGA AGAAGTGGTATTGGTAGTATTTCATTTTTTGTTGATGTAACAAACTATGTAATGCTACTTACTGGTCAACCAATGCATGC ATTTGACTTAGACAAGTTAGAGGGTAGAATTAATGTCCGTTATGCAAAAAATAATGAGGAGCTAACACTACTTGATCAAA CACAAGTTAAATTGGATTGTGATACTTTAATAATAGCAGACGATAAGAAAGCTCTTGCTATAGCTGGTGTTATGGGCGGC TTAGACTCATCAATTACTGATAGTACTACTAATATATTTTTAGAAAGTGTATTCTTTGTACCAGAGAAAATTGCTGGTAA AGCGCGTAAATATAATCTTCATACAGATTCATCACATAGATTTGAGCGTGGTGTTGATCCACAATTAGCTAAAAAAGCTA TGAAAATAGCTATTAGATTAATAAACGAAATAGCTGGTGGTGAAGTTGCACCAATTCATGGAGCTGAGGATTTAGCAAAC TTAAACAAACAAATCAAAATAAATCTTTCTATTAAGAAGCTAAATCACGTGTTAGGTACAAACTTTGATATAGAATATGT AACAGAAGTACTTAAAGCATTACATATGGATGTTGCAACAAGTTTTGATGGTAATTGTATAGAGGTAATACCTCCTTCAT ATCGTTTTGATATGGAAATTCCTGAAGATTTAATTGAAGAAGTTGCTCGTATATACGGTTATTCAAAACTTCCAGAAACT ATGCCTAAATATGCAGCAGCTAAAACTAATATCTCTGAAACATACCAGTCTTTAGATACACTAAATATGCGTTTGATAGA TAGAGGCTATCATGAGACTATTAACTATAGTTTTATAGATCCAAAATTTGATGAGTTTTTCTTTGCTGATAGAGGTATTG CAATTCAAAATCCTATTTCACAAGATTTATCTATAATGAGACAATCTTTGATACCTGGTTTGATTAATATTTTTAAGGCA AATACATCACGTCAACAAAATCGAGTTAGAATATTTGAGAAGGGTGCTTGTTTTAAACTTCAAGATAACCAAAGAATCCA ATTTGATAGAATTGCAGGGTTAGCGTATGGAGAGCTTTTAAATATTAATTGGTCTAATTCTAAGAAAGTAGACTTTTTTG ATGTTAAAGCAGATGTTGAAGCATTATGTAATGATCTTACAAGCTTAAGTTTTGAAGTTTGTAATGATATTAATTGGCTG CATCTAGGTCAATCTGCTTATATCTTAGCTAATGGTAATAAGATTGGTGTAATCGGTGTAATTCACCCAACAGTTTTAAA AAATTTCCAAATCAAAGCAAAGGCTCCTATAGTTTTTGAATTAGATTTAGATGTTTTGATTAAAAGACAAATACCAAACT TTACTAAAATTTCTAAGTATCCCTCAGTATCGAGAGATATATCATTCTTAGTTGATAAATCTGTACTTGCTGGAGATATT ATCAAAGCTATAAAGACTTTAAATATAAATATCTTAAAAGATGTAAGTATTTTTGATATATATGAATCACAAGATAGTGA TAGAAAGAGTATTGCTCTAAACATGCTTTTCCAAGATAACTTACAAACTTTAGATGATAAGGTTATTGTTGAGAGTATAG ATAAAGTTCTAGAAGCTCTGAAAACTAAATTTAATATTGAACAAAGAGTTTAA
Upstream 100 bases:
>100_bases GATTATCTATGCTTAGATATGGTATAGATGATCTAAGAATGTTTTTTGAAAATGATTTGAGATTTTTAAAACAGTTTTAA TTATTATTTGAGGTTTATAA
Downstream 100 bases:
>100_bases AACTTTTTTGAGATAAATTTGCTAAAATTAACCAATATTCATTTAGTTTTCTAAACATTTATTACATAACCCCTTTAACT CAAGGCTCCAACTATTAATT
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 790; Mature: 790
Protein sequence:
>790_residues MKFSHNWLNEYLGDTQDSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDADKLNVCSVDAGEDELLTIVC GASNIYEGMKAPVAKIGAVLPGNFKIKKSKLRGQESFGMMCSEEELGLAEKADGLMDLPIDAPVGTDINKYLNLDDNIIE VDLTPNRADCLSVYGIAREVSALTKTELKNLEIPEPKVVIDDTKEVNITATDACHAYYGCIIKNVNNKIQTPLWMVEKLR RSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLEGRINVRYAKNNEELTLLDQTQVKLDCDTLIIADDKKALAIAGVMGG LDSSITDSTTNIFLESVFFVPEKIAGKARKYNLHTDSSHRFERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHGAEDLAN LNKQIKINLSIKKLNHVLGTNFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDMEIPEDLIEEVARIYGYSKLPET MPKYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFFFADRGIAIQNPISQDLSIMRQSLIPGLINIFKA NTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAGLAYGELLNINWSNSKKVDFFDVKADVEALCNDLTSLSFEVCNDINWL HLGQSAYILANGNKIGVIGVIHPTVLKNFQIKAKAPIVFELDLDVLIKRQIPNFTKISKYPSVSRDISFLVDKSVLAGDI IKAIKTLNINILKDVSIFDIYESQDSDRKSIALNMLFQDNLQTLDDKVIVESIDKVLEALKTKFNIEQRV
Sequences:
>Translated_790_residues MKFSHNWLNEYLGDTQDSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDADKLNVCSVDAGEDELLTIVC GASNIYEGMKAPVAKIGAVLPGNFKIKKSKLRGQESFGMMCSEEELGLAEKADGLMDLPIDAPVGTDINKYLNLDDNIIE VDLTPNRADCLSVYGIAREVSALTKTELKNLEIPEPKVVIDDTKEVNITATDACHAYYGCIIKNVNNKIQTPLWMVEKLR RSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLEGRINVRYAKNNEELTLLDQTQVKLDCDTLIIADDKKALAIAGVMGG LDSSITDSTTNIFLESVFFVPEKIAGKARKYNLHTDSSHRFERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHGAEDLAN LNKQIKINLSIKKLNHVLGTNFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDMEIPEDLIEEVARIYGYSKLPET MPKYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFFFADRGIAIQNPISQDLSIMRQSLIPGLINIFKA NTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAGLAYGELLNINWSNSKKVDFFDVKADVEALCNDLTSLSFEVCNDINWL HLGQSAYILANGNKIGVIGVIHPTVLKNFQIKAKAPIVFELDLDVLIKRQIPNFTKISKYPSVSRDISFLVDKSVLAGDI IKAIKTLNINILKDVSIFDIYESQDSDRKSIALNMLFQDNLQTLDDKVIVESIDKVLEALKTKFNIEQRV >Mature_790_residues MKFSHNWLNEYLGDTQDSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDADKLNVCSVDAGEDELLTIVC GASNIYEGMKAPVAKIGAVLPGNFKIKKSKLRGQESFGMMCSEEELGLAEKADGLMDLPIDAPVGTDINKYLNLDDNIIE VDLTPNRADCLSVYGIAREVSALTKTELKNLEIPEPKVVIDDTKEVNITATDACHAYYGCIIKNVNNKIQTPLWMVEKLR RSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLEGRINVRYAKNNEELTLLDQTQVKLDCDTLIIADDKKALAIAGVMGG LDSSITDSTTNIFLESVFFVPEKIAGKARKYNLHTDSSHRFERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHGAEDLAN LNKQIKINLSIKKLNHVLGTNFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDMEIPEDLIEEVARIYGYSKLPET MPKYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFFFADRGIAIQNPISQDLSIMRQSLIPGLINIFKA NTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAGLAYGELLNINWSNSKKVDFFDVKADVEALCNDLTSLSFEVCNDINWL HLGQSAYILANGNKIGVIGVIHPTVLKNFQIKAKAPIVFELDLDVLIKRQIPNFTKISKYPSVSRDISFLVDKSVLAGDI IKAIKTLNINILKDVSIFDIYESQDSDRKSIALNMLFQDNLQTLDDKVIVESIDKVLEALKTKFNIEQRV
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788006, Length=800, Percent_Identity=44.875, Blast_Score=649, Evalue=0.0,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 88166; Mature: 88166
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSHNWLNEYLGDTQDSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDA CCCCHHHHHHHHCCCCCCCHHHHHHEECCCEECCCCHHHHHHHCCEEEEEEEECCCCCCC DKLNVCSVDAGEDELLTIVCGASNIYEGMKAPVAKIGAVLPGNFKIKKSKLRGQESFGMM CCEEEEECCCCCCCEEEEEECCHHHHHHHHCCHHHHCCCCCCCEEEEHHHHCCCHHHCCE CSEEELGLAEKADGLMDLPIDAPVGTDINKYLNLDDNIIEVDLTPNRADCLSVYGIAREV ECCHHCCCHHHCCCCEECCCCCCCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHH SALTKTELKNLEIPEPKVVIDDTKEVNITATDACHAYYGCIIKNVNNKIQTPLWMVEKLR HHHHHHHHCCCCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLEGRINVRYAKNNEELTLLDQTQVKLDC HCCCCCEEEEEEECCEEEEEECCCCCCCCHHHCCCEEEEEEECCCCEEEEEECCEEEEEC DTLIIADDKKALAIAGVMGGLDSSITDSTTNIFLESVFFVPEKIAGKARKYNLHTDSSHR CEEEEECCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCEEEECCCCCCCH FERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHGAEDLANLNKQIKINLSIKKLNHVLGT HHCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHCCCCEEEEEEEHHHHHHHHCC NFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDMEIPEDLIEEVARIYGYSKLPET CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCHHHHHHHHHHCCCCCCHHH MPKYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFFFADRGIAIQNPIS HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCEEECCCCCHHHEEECCCEEECCCHH QDLSIMRQSLIPGLINIFKANTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAGLAYGELL HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCEEEHHHHCCEEECEEE NINWSNSKKVDFFDVKADVEALCNDLTSLSFEVCNDINWLHLGQSAYILANGNKIGVIGV EEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCEEEEEEE IHPTVLKNFQIKAKAPIVFELDLDVLIKRQIPNFTKISKYPSVSRDISFLVDKSVLAGDI ECHHHHCCCEEEECCCEEEEECHHHHHHHCCCCCHHHCCCCCCCCCHHHHHCCHHHHHHH IKAIKTLNINILKDVSIFDIYESQDSDRKSIALNMLFQDNLQTLDDKVIVESIDKVLEAL HHHHHHCCEEEEECCEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH KTKFNIEQRV HHHCCHHCCC >Mature Secondary Structure MKFSHNWLNEYLGDTQDSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDA CCCCHHHHHHHHCCCCCCCHHHHHHEECCCEECCCCHHHHHHHCCEEEEEEEECCCCCCC DKLNVCSVDAGEDELLTIVCGASNIYEGMKAPVAKIGAVLPGNFKIKKSKLRGQESFGMM CCEEEEECCCCCCCEEEEEECCHHHHHHHHCCHHHHCCCCCCCEEEEHHHHCCCHHHCCE CSEEELGLAEKADGLMDLPIDAPVGTDINKYLNLDDNIIEVDLTPNRADCLSVYGIAREV ECCHHCCCHHHCCCCEECCCCCCCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHH SALTKTELKNLEIPEPKVVIDDTKEVNITATDACHAYYGCIIKNVNNKIQTPLWMVEKLR HHHHHHHHCCCCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLEGRINVRYAKNNEELTLLDQTQVKLDC HCCCCCEEEEEEECCEEEEEECCCCCCCCHHHCCCEEEEEEECCCCEEEEEECCEEEEEC DTLIIADDKKALAIAGVMGGLDSSITDSTTNIFLESVFFVPEKIAGKARKYNLHTDSSHR CEEEEECCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCEEEECCCCCCCH FERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHGAEDLANLNKQIKINLSIKKLNHVLGT HHCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHCCCCEEEEEEEHHHHHHHHCC NFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDMEIPEDLIEEVARIYGYSKLPET CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCHHHHHHHHHHCCCCCCHHH MPKYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFFFADRGIAIQNPIS HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCEEECCCCCHHHEEECCCEEECCCHH QDLSIMRQSLIPGLINIFKANTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAGLAYGELL HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCEEEHHHHCCEEECEEE NINWSNSKKVDFFDVKADVEALCNDLTSLSFEVCNDINWLHLGQSAYILANGNKIGVIGV EEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCEEEEEEE IHPTVLKNFQIKAKAPIVFELDLDVLIKRQIPNFTKISKYPSVSRDISFLVDKSVLAGDI ECHHHHCCCEEEECCCEEEEECHHHHHHHCCCCCHHHCCCCCCCCCHHHHHCCHHHHHHH IKAIKTLNINILKDVSIFDIYESQDSDRKSIALNMLFQDNLQTLDDKVIVESIDKVLEAL HHHHHHCCEEEEECCEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH KTKFNIEQRV HHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA