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The map label for this gene is sspB [H]

Identifier: 89256505

GI number: 89256505

Start: 1133877

End: 1134284

Strand: Reverse

Name: sspB [H]

Synonym: FTL_1184

Alternate gene names: 89256505

Gene position: 1134284-1133877 (Counterclockwise)

Preceding gene: 89256506

Following gene: 89256499

Centisome position: 59.83

GC content: 31.86

Gene sequence:

>408_bases
ATGGCTATGCTTAGAGCATATGTAGTTAAAGCTACATACAACTGGCTAGTTGATCATGGATTTACACCTTATGTTTTAGT
TGATACTGAGTATGAAGGTGTTATAGTACCAGCAAACTATATTGATGAAGATAAAAAAATACTTTTAGATTTATCTCCTC
AAGCAATACAAGATTTAGTTATAGATGATAATCATATTAGCTTTGCTGCAACGTTTGATAGTGAGCCAATGTCTATAAAT
ATTCCTATCGAAGCTGTCTTAGAAGTATTTTCTAAAGAAACAGAGCAAGGAATGTATGCTCGCGAATTTGGTTATGGAAT
TAATATCAATGAAGGCGAAGATGATGAAAATGCTAATCCTAAGAAATTAGGAGAAACTAATTCAGATAACGTTCTTTCGT
TAGATTAA

Upstream 100 bases:

>100_bases
ATCTCAATACCTACCAAAGATAAAAACATTATCAAAGAGATCAAAGAATTACTTAGCGAACCTAACTTTATAAAAACTAT
CAAAGCAAAAGGAGCTTAAT

Downstream 100 bases:

>100_bases
TTCTTTACTCTTAACAACCTTCTGTATTTATCTGTAATTACAGGCAAATATCCTACTATAAAACTCAATGGTATGCATAT
AAAAGACCAATAAAAAACAA

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MAMLRAYVVKATYNWLVDHGFTPYVLVDTEYEGVIVPANYIDEDKKILLDLSPQAIQDLVIDDNHISFAATFDSEPMSIN
IPIEAVLEVFSKETEQGMYAREFGYGININEGEDDENANPKKLGETNSDNVLSLD

Sequences:

>Translated_135_residues
MAMLRAYVVKATYNWLVDHGFTPYVLVDTEYEGVIVPANYIDEDKKILLDLSPQAIQDLVIDDNHISFAATFDSEPMSIN
IPIEAVLEVFSKETEQGMYAREFGYGININEGEDDENANPKKLGETNSDNVLSLD
>Mature_134_residues
AMLRAYVVKATYNWLVDHGFTPYVLVDTEYEGVIVPANYIDEDKKILLDLSPQAIQDLVIDDNHISFAATFDSEPMSINI
PIEAVLEVFSKETEQGMYAREFGYGININEGEDDENANPKKLGETNSDNVLSLD

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=102, Percent_Identity=34.3137254901961, Blast_Score=76, Evalue=8e-16,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 15152; Mature: 15021

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMLRAYVVKATYNWLVDHGFTPYVLVDTEYEGVIVPANYIDEDKKILLDLSPQAIQDLV
CCHHHEEHHHHHHEEHCCCCCCCEEEEECCCCCEEEECCCCCCCCEEEEECCHHHHHHHE
IDDNHISFAATFDSEPMSINIPIEAVLEVFSKETEQGMYAREFGYGININEGEDDENANP
ECCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHCCCEEHHCCCCCCCCCCCCCCCCCC
KKLGETNSDNVLSLD
CCCCCCCCCCEEEEC
>Mature Secondary Structure 
AMLRAYVVKATYNWLVDHGFTPYVLVDTEYEGVIVPANYIDEDKKILLDLSPQAIQDLV
CHHHEEHHHHHHEEHCCCCCCCEEEEECCCCCEEEECCCCCCCCEEEEECCHHHHHHHE
IDDNHISFAATFDSEPMSINIPIEAVLEVFSKETEQGMYAREFGYGININEGEDDENANP
ECCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHCCCEEHHCCCCCCCCCCCCCCCCCC
KKLGETNSDNVLSLD
CCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]