Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is 89256488

Identifier: 89256488

GI number: 89256488

Start: 1108616

End: 1110046

Strand: Reverse

Name: 89256488

Synonym: FTL_1166

Alternate gene names: NA

Gene position: 1110046-1108616 (Counterclockwise)

Preceding gene: 89256489

Following gene: 89256487

Centisome position: 58.55

GC content: 26.14

Gene sequence:

>1431_bases
ATGGATGAAAAAAGAAAAGATTTAAGTACGAGTGATGCTAGCATCCTAAAAAAAACTTTTGACAAACTAAGTAATGATAT
AAGAGATGATTTTGATAAGAGAATTTTTGATTATAGTAATGCTCTTTTATTCAAGTATTATAGTAACCTTTATTATTTCG
TTCCTAAATCATGCTTATTAGAAATAAATGATAAAGGACACAATGGTTACTATATTCCACCTCAGGAATATTTTTTCATA
GAAGACAAGAGAACAGGTAAAACTCTAACATATACGACAAAGTCAGAAAATATAATACTCCCTATTAGAGATATCACAAC
CATAAAACAAAGTGATACATCAATAAATATATCATTGGAATTTGCAAATAACTTTGACTATGATTATGTTACTATCTGGA
TAGATCCAACTTTATGTAAAGAAGATCCTAGCTTTGCCACATACATATTTAACCAAGTATTAGAAGATAATGGCTCAGCA
AAGATTAAATTTTCAAATCATAGTTATACAACAAAAAATGTACAAATAGAACCAATTAAGTTCCAATTAAAACCAACAGA
AAAGTTAGTTCTCAATATCCATTCTCCTAGCCTTTTATATGGTTTTAACATAAAGATCAAAGACTTATTTAAATACAAAA
ATAATGACCTCAACAAAATTGACTTTTTTTTAGAAGTTAAAACTGAAAACTATAATGACGAAAAATTATTATCTCTATTT
AGAGTTAATTTAATACCTGTGTTTAATAGTTTTGATGATTACTCAAGCACCTCATTTGCTTCGATGAATCTCTCAGAGAG
TAAACTAAAACATCATCAAAAAGATGATGCTCAAGCAATAGAAGTATTATCTGTTTATGAGAATAATAAACAATGTGATT
TTAATAGTTTTCTTTTTGTAGGACAGAATGAGTATTATTTTAATCGCAGCACACAATCTTTAAATTATAGTAGCGTACTC
CCTCAATTTAGTAATAAAATAATAGGAACAAAAATACATACATATACAACCTGGACACAGATAACTGAGATTTCTGATCT
AATTGAAATTAACTCAAATGCAATAGCATCTATAAGCTGTAATATTTCTCCAATAGTTATTAACAAAGCACTAAACAACT
ACAATAGCAATGCTAAAGAAATGTTTAATATAATAGATATGATTATCTCTAAGAATATGTATTCAAAAACAACATTCTTA
GCTATAGCAAAGCTTTTAAAGATTAATACTAATGACTTAACTTTACTATCAATGCTCCTACAAGATGTTGAGATGGACTC
TAATATAAATGAGCTAATTTTAACCTTAAGTGATAAATATAACCCAAAATATAAACATTTCTTAAATTTTCATATTGGTA
TTATATGCAAATTTATAAATCAAAACACCTTTAGCTTTATTAAAAAGATTGTTTTAAATAACTCTATATAA

Upstream 100 bases:

>100_bases
AATAAATAGTAAAGCAATGTGTATGTTTGCTCCGGGTGGTATAGTTGATTTTATTAGTAGTGGACAAATAAATGTAAAAA
CATCTTAGAAGGTCATTATC

Downstream 100 bases:

>100_bases
AGGATATTATAAATGAAAGACTTTAAAGAGATAGAAATTATTCTAGATATTATAAAAACTACAAGAGAAATTATAGAAGA
TAATGATAATGATAATGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MDEKRKDLSTSDASILKKTFDKLSNDIRDDFDKRIFDYSNALLFKYYSNLYYFVPKSCLLEINDKGHNGYYIPPQEYFFI
EDKRTGKTLTYTTKSENIILPIRDITTIKQSDTSINISLEFANNFDYDYVTIWIDPTLCKEDPSFATYIFNQVLEDNGSA
KIKFSNHSYTTKNVQIEPIKFQLKPTEKLVLNIHSPSLLYGFNIKIKDLFKYKNNDLNKIDFFLEVKTENYNDEKLLSLF
RVNLIPVFNSFDDYSSTSFASMNLSESKLKHHQKDDAQAIEVLSVYENNKQCDFNSFLFVGQNEYYFNRSTQSLNYSSVL
PQFSNKIIGTKIHTYTTWTQITEISDLIEINSNAIASISCNISPIVINKALNNYNSNAKEMFNIIDMIISKNMYSKTTFL
AIAKLLKINTNDLTLLSMLLQDVEMDSNINELILTLSDKYNPKYKHFLNFHIGIICKFINQNTFSFIKKIVLNNSI

Sequences:

>Translated_476_residues
MDEKRKDLSTSDASILKKTFDKLSNDIRDDFDKRIFDYSNALLFKYYSNLYYFVPKSCLLEINDKGHNGYYIPPQEYFFI
EDKRTGKTLTYTTKSENIILPIRDITTIKQSDTSINISLEFANNFDYDYVTIWIDPTLCKEDPSFATYIFNQVLEDNGSA
KIKFSNHSYTTKNVQIEPIKFQLKPTEKLVLNIHSPSLLYGFNIKIKDLFKYKNNDLNKIDFFLEVKTENYNDEKLLSLF
RVNLIPVFNSFDDYSSTSFASMNLSESKLKHHQKDDAQAIEVLSVYENNKQCDFNSFLFVGQNEYYFNRSTQSLNYSSVL
PQFSNKIIGTKIHTYTTWTQITEISDLIEINSNAIASISCNISPIVINKALNNYNSNAKEMFNIIDMIISKNMYSKTTFL
AIAKLLKINTNDLTLLSMLLQDVEMDSNINELILTLSDKYNPKYKHFLNFHIGIICKFINQNTFSFIKKIVLNNSI
>Mature_476_residues
MDEKRKDLSTSDASILKKTFDKLSNDIRDDFDKRIFDYSNALLFKYYSNLYYFVPKSCLLEINDKGHNGYYIPPQEYFFI
EDKRTGKTLTYTTKSENIILPIRDITTIKQSDTSINISLEFANNFDYDYVTIWIDPTLCKEDPSFATYIFNQVLEDNGSA
KIKFSNHSYTTKNVQIEPIKFQLKPTEKLVLNIHSPSLLYGFNIKIKDLFKYKNNDLNKIDFFLEVKTENYNDEKLLSLF
RVNLIPVFNSFDDYSSTSFASMNLSESKLKHHQKDDAQAIEVLSVYENNKQCDFNSFLFVGQNEYYFNRSTQSLNYSSVL
PQFSNKIIGTKIHTYTTWTQITEISDLIEINSNAIASISCNISPIVINKALNNYNSNAKEMFNIIDMIISKNMYSKTTFL
AIAKLLKINTNDLTLLSMLLQDVEMDSNINELILTLSDKYNPKYKHFLNFHIGIICKFINQNTFSFIKKIVLNNSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55364; Mature: 55364

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKRKDLSTSDASILKKTFDKLSNDIRDDFDKRIFDYSNALLFKYYSNLYYFVPKSCLL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHCCEEEEECCEEEE
EINDKGHNGYYIPPQEYFFIEDKRTGKTLTYTTKSENIILPIRDITTIKQSDTSINISLE
EEECCCCCCEEECCCCEEEEECCCCCCEEEEEECCCEEEEEECCCEEEECCCCEEEEEEE
FANNFDYDYVTIWIDPTLCKEDPSFATYIFNQVLEDNGSAKIKFSNHSYTTKNVQIEPIK
ECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEECCEEEEEEE
FQLKPTEKLVLNIHSPSLLYGFNIKIKDLFKYKNNDLNKIDFFLEVKTENYNDEKLLSLF
EEECCCEEEEEEECCCCEEEEECEEEEEEEHHCCCCCCEEEEEEEEECCCCCHHHHHHHH
RVNLIPVFNSFDDYSSTSFASMNLSESKLKHHQKDDAQAIEVLSVYENNKQCDFNSFLFV
HHHEEEEECCCCCCCCCCEEECCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEE
GQNEYYFNRSTQSLNYSSVLPQFSNKIIGTKIHTYTTWTQITEISDLIEINSNAIASISC
ECCCEEEECCCCCCCHHHHCHHHHCCEECEEEEEEEEHHHHHHHHHHHHCCCCEEEEEEC
NISPIVINKALNNYNSNAKEMFNIIDMIISKNMYSKTTFLAIAKLLKINTNDLTLLSMLL
CCCEEEEEHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
QDVEMDSNINELILTLSDKYNPKYKHFLNFHIGIICKFINQNTFSFIKKIVLNNSI
HHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MDEKRKDLSTSDASILKKTFDKLSNDIRDDFDKRIFDYSNALLFKYYSNLYYFVPKSCLL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHCCEEEEECCEEEE
EINDKGHNGYYIPPQEYFFIEDKRTGKTLTYTTKSENIILPIRDITTIKQSDTSINISLE
EEECCCCCCEEECCCCEEEEECCCCCCEEEEEECCCEEEEEECCCEEEECCCCEEEEEEE
FANNFDYDYVTIWIDPTLCKEDPSFATYIFNQVLEDNGSAKIKFSNHSYTTKNVQIEPIK
ECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEECCEEEEEEE
FQLKPTEKLVLNIHSPSLLYGFNIKIKDLFKYKNNDLNKIDFFLEVKTENYNDEKLLSLF
EEECCCEEEEEEECCCCEEEEECEEEEEEEHHCCCCCCEEEEEEEEECCCCCHHHHHHHH
RVNLIPVFNSFDDYSSTSFASMNLSESKLKHHQKDDAQAIEVLSVYENNKQCDFNSFLFV
HHHEEEEECCCCCCCCCCEEECCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEE
GQNEYYFNRSTQSLNYSSVLPQFSNKIIGTKIHTYTTWTQITEISDLIEINSNAIASISC
ECCCEEEECCCCCCCHHHHCHHHHCCEECEEEEEEEEHHHHHHHHHHHHCCCCEEEEEEC
NISPIVINKALNNYNSNAKEMFNIIDMIISKNMYSKTTFLAIAKLLKINTNDLTLLSMLL
CCCEEEEEHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
QDVEMDSNINELILTLSDKYNPKYKHFLNFHIGIICKFINQNTFSFIKKIVLNNSI
HHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA