Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256488
Identifier: 89256488
GI number: 89256488
Start: 1108616
End: 1110046
Strand: Reverse
Name: 89256488
Synonym: FTL_1166
Alternate gene names: NA
Gene position: 1110046-1108616 (Counterclockwise)
Preceding gene: 89256489
Following gene: 89256487
Centisome position: 58.55
GC content: 26.14
Gene sequence:
>1431_bases ATGGATGAAAAAAGAAAAGATTTAAGTACGAGTGATGCTAGCATCCTAAAAAAAACTTTTGACAAACTAAGTAATGATAT AAGAGATGATTTTGATAAGAGAATTTTTGATTATAGTAATGCTCTTTTATTCAAGTATTATAGTAACCTTTATTATTTCG TTCCTAAATCATGCTTATTAGAAATAAATGATAAAGGACACAATGGTTACTATATTCCACCTCAGGAATATTTTTTCATA GAAGACAAGAGAACAGGTAAAACTCTAACATATACGACAAAGTCAGAAAATATAATACTCCCTATTAGAGATATCACAAC CATAAAACAAAGTGATACATCAATAAATATATCATTGGAATTTGCAAATAACTTTGACTATGATTATGTTACTATCTGGA TAGATCCAACTTTATGTAAAGAAGATCCTAGCTTTGCCACATACATATTTAACCAAGTATTAGAAGATAATGGCTCAGCA AAGATTAAATTTTCAAATCATAGTTATACAACAAAAAATGTACAAATAGAACCAATTAAGTTCCAATTAAAACCAACAGA AAAGTTAGTTCTCAATATCCATTCTCCTAGCCTTTTATATGGTTTTAACATAAAGATCAAAGACTTATTTAAATACAAAA ATAATGACCTCAACAAAATTGACTTTTTTTTAGAAGTTAAAACTGAAAACTATAATGACGAAAAATTATTATCTCTATTT AGAGTTAATTTAATACCTGTGTTTAATAGTTTTGATGATTACTCAAGCACCTCATTTGCTTCGATGAATCTCTCAGAGAG TAAACTAAAACATCATCAAAAAGATGATGCTCAAGCAATAGAAGTATTATCTGTTTATGAGAATAATAAACAATGTGATT TTAATAGTTTTCTTTTTGTAGGACAGAATGAGTATTATTTTAATCGCAGCACACAATCTTTAAATTATAGTAGCGTACTC CCTCAATTTAGTAATAAAATAATAGGAACAAAAATACATACATATACAACCTGGACACAGATAACTGAGATTTCTGATCT AATTGAAATTAACTCAAATGCAATAGCATCTATAAGCTGTAATATTTCTCCAATAGTTATTAACAAAGCACTAAACAACT ACAATAGCAATGCTAAAGAAATGTTTAATATAATAGATATGATTATCTCTAAGAATATGTATTCAAAAACAACATTCTTA GCTATAGCAAAGCTTTTAAAGATTAATACTAATGACTTAACTTTACTATCAATGCTCCTACAAGATGTTGAGATGGACTC TAATATAAATGAGCTAATTTTAACCTTAAGTGATAAATATAACCCAAAATATAAACATTTCTTAAATTTTCATATTGGTA TTATATGCAAATTTATAAATCAAAACACCTTTAGCTTTATTAAAAAGATTGTTTTAAATAACTCTATATAA
Upstream 100 bases:
>100_bases AATAAATAGTAAAGCAATGTGTATGTTTGCTCCGGGTGGTATAGTTGATTTTATTAGTAGTGGACAAATAAATGTAAAAA CATCTTAGAAGGTCATTATC
Downstream 100 bases:
>100_bases AGGATATTATAAATGAAAGACTTTAAAGAGATAGAAATTATTCTAGATATTATAAAAACTACAAGAGAAATTATAGAAGA TAATGATAATGATAATGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MDEKRKDLSTSDASILKKTFDKLSNDIRDDFDKRIFDYSNALLFKYYSNLYYFVPKSCLLEINDKGHNGYYIPPQEYFFI EDKRTGKTLTYTTKSENIILPIRDITTIKQSDTSINISLEFANNFDYDYVTIWIDPTLCKEDPSFATYIFNQVLEDNGSA KIKFSNHSYTTKNVQIEPIKFQLKPTEKLVLNIHSPSLLYGFNIKIKDLFKYKNNDLNKIDFFLEVKTENYNDEKLLSLF RVNLIPVFNSFDDYSSTSFASMNLSESKLKHHQKDDAQAIEVLSVYENNKQCDFNSFLFVGQNEYYFNRSTQSLNYSSVL PQFSNKIIGTKIHTYTTWTQITEISDLIEINSNAIASISCNISPIVINKALNNYNSNAKEMFNIIDMIISKNMYSKTTFL AIAKLLKINTNDLTLLSMLLQDVEMDSNINELILTLSDKYNPKYKHFLNFHIGIICKFINQNTFSFIKKIVLNNSI
Sequences:
>Translated_476_residues MDEKRKDLSTSDASILKKTFDKLSNDIRDDFDKRIFDYSNALLFKYYSNLYYFVPKSCLLEINDKGHNGYYIPPQEYFFI EDKRTGKTLTYTTKSENIILPIRDITTIKQSDTSINISLEFANNFDYDYVTIWIDPTLCKEDPSFATYIFNQVLEDNGSA KIKFSNHSYTTKNVQIEPIKFQLKPTEKLVLNIHSPSLLYGFNIKIKDLFKYKNNDLNKIDFFLEVKTENYNDEKLLSLF RVNLIPVFNSFDDYSSTSFASMNLSESKLKHHQKDDAQAIEVLSVYENNKQCDFNSFLFVGQNEYYFNRSTQSLNYSSVL PQFSNKIIGTKIHTYTTWTQITEISDLIEINSNAIASISCNISPIVINKALNNYNSNAKEMFNIIDMIISKNMYSKTTFL AIAKLLKINTNDLTLLSMLLQDVEMDSNINELILTLSDKYNPKYKHFLNFHIGIICKFINQNTFSFIKKIVLNNSI >Mature_476_residues MDEKRKDLSTSDASILKKTFDKLSNDIRDDFDKRIFDYSNALLFKYYSNLYYFVPKSCLLEINDKGHNGYYIPPQEYFFI EDKRTGKTLTYTTKSENIILPIRDITTIKQSDTSINISLEFANNFDYDYVTIWIDPTLCKEDPSFATYIFNQVLEDNGSA KIKFSNHSYTTKNVQIEPIKFQLKPTEKLVLNIHSPSLLYGFNIKIKDLFKYKNNDLNKIDFFLEVKTENYNDEKLLSLF RVNLIPVFNSFDDYSSTSFASMNLSESKLKHHQKDDAQAIEVLSVYENNKQCDFNSFLFVGQNEYYFNRSTQSLNYSSVL PQFSNKIIGTKIHTYTTWTQITEISDLIEINSNAIASISCNISPIVINKALNNYNSNAKEMFNIIDMIISKNMYSKTTFL AIAKLLKINTNDLTLLSMLLQDVEMDSNINELILTLSDKYNPKYKHFLNFHIGIICKFINQNTFSFIKKIVLNNSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55364; Mature: 55364
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEKRKDLSTSDASILKKTFDKLSNDIRDDFDKRIFDYSNALLFKYYSNLYYFVPKSCLL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHCCEEEEECCEEEE EINDKGHNGYYIPPQEYFFIEDKRTGKTLTYTTKSENIILPIRDITTIKQSDTSINISLE EEECCCCCCEEECCCCEEEEECCCCCCEEEEEECCCEEEEEECCCEEEECCCCEEEEEEE FANNFDYDYVTIWIDPTLCKEDPSFATYIFNQVLEDNGSAKIKFSNHSYTTKNVQIEPIK ECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEECCEEEEEEE FQLKPTEKLVLNIHSPSLLYGFNIKIKDLFKYKNNDLNKIDFFLEVKTENYNDEKLLSLF EEECCCEEEEEEECCCCEEEEECEEEEEEEHHCCCCCCEEEEEEEEECCCCCHHHHHHHH RVNLIPVFNSFDDYSSTSFASMNLSESKLKHHQKDDAQAIEVLSVYENNKQCDFNSFLFV HHHEEEEECCCCCCCCCCEEECCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEE GQNEYYFNRSTQSLNYSSVLPQFSNKIIGTKIHTYTTWTQITEISDLIEINSNAIASISC ECCCEEEECCCCCCCHHHHCHHHHCCEECEEEEEEEEHHHHHHHHHHHHCCCCEEEEEEC NISPIVINKALNNYNSNAKEMFNIIDMIISKNMYSKTTFLAIAKLLKINTNDLTLLSMLL CCCEEEEEHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH QDVEMDSNINELILTLSDKYNPKYKHFLNFHIGIICKFINQNTFSFIKKIVLNNSI HHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCC >Mature Secondary Structure MDEKRKDLSTSDASILKKTFDKLSNDIRDDFDKRIFDYSNALLFKYYSNLYYFVPKSCLL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHCCEEEEECCEEEE EINDKGHNGYYIPPQEYFFIEDKRTGKTLTYTTKSENIILPIRDITTIKQSDTSINISLE EEECCCCCCEEECCCCEEEEECCCCCCEEEEEECCCEEEEEECCCEEEECCCCEEEEEEE FANNFDYDYVTIWIDPTLCKEDPSFATYIFNQVLEDNGSAKIKFSNHSYTTKNVQIEPIK ECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEECCEEEEEEE FQLKPTEKLVLNIHSPSLLYGFNIKIKDLFKYKNNDLNKIDFFLEVKTENYNDEKLLSLF EEECCCEEEEEEECCCCEEEEECEEEEEEEHHCCCCCCEEEEEEEEECCCCCHHHHHHHH RVNLIPVFNSFDDYSSTSFASMNLSESKLKHHQKDDAQAIEVLSVYENNKQCDFNSFLFV HHHEEEEECCCCCCCCCCEEECCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEE GQNEYYFNRSTQSLNYSSVLPQFSNKIIGTKIHTYTTWTQITEISDLIEINSNAIASISC ECCCEEEECCCCCCCHHHHCHHHHCCEECEEEEEEEEHHHHHHHHHHHHCCCCEEEEEEC NISPIVINKALNNYNSNAKEMFNIIDMIISKNMYSKTTFLAIAKLLKINTNDLTLLSMLL CCCEEEEEHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH QDVEMDSNINELILTLSDKYNPKYKHFLNFHIGIICKFINQNTFSFIKKIVLNNSI HHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA