Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is yeiH [C]
Identifier: 89256458
GI number: 89256458
Start: 1076121
End: 1077173
Strand: Reverse
Name: yeiH [C]
Synonym: FTL_1133
Alternate gene names: 89256458
Gene position: 1077173-1076121 (Counterclockwise)
Preceding gene: 89256459
Following gene: 89256457
Centisome position: 56.81
GC content: 36.85
Gene sequence:
>1053_bases ATGAAAAAACATTTCACGCAACCAATGATCTTAGGTGTACTATTAGTAGCAGTTCTTGCTGGTATAGCATATTTTATTGC AAAAATTCCAACGATTAAGGATCTTGAAATTAGTCCACTAATTATAGGAATTGTGCTAGGTATGGCTCTAACCCATACAC CTGCAAGTAAAATTATTCATAAATGGAAAGAAGGTGTAATATTTAGTGCCAAAAAAATCCTTAGATTTGCAATAATATTT TATGGATTTAACCTTACATTTCAATTAATAGCATCAGTTGGTTTAGCTAGGCTTTCTGTATCAGTAATTATGCTAGTATC TACGCTAATTCTAGGTATCGTTTTAGGAACAAAGATATTTGGCTTAGATAGAGATAGCTCAATTTTAGTGGCTGCTGGTA GTGCTGTATGTGGTGCAGCTGCTGTACTAGCCACTGAAGGCACTTTAAAATCAGAACCGTATAAAGCAGCTATGGCTGTT GGTACAGTTGTACTATTTGGAACTGCAGCAATGTTTCTATACCCTATTCTTATGAAAGCTGGCCTTTTAGGTCATATGAC TGATGCTCAGTATGGTATTTTTGCTGGCGGCTCTATCCATGAGGTAGCTCAGGTTGTAGCTGCTGGTAGTGGTGTAAGCG CTCATGCAGAAGAAGTCGCTGTTACAGTTAAAATGATCCGTGTGATGATGCTAGCTCCTATGCTAATCGTGATAGGTATA TGGATCGCTAAGTCAGCTACTACTGTTACTGGCGCAAATAGCTCAAAACCCGAAAAAGGATCAATCAAAAAAATCATCCC ATGGTTTGCTATTGGCTTTATAATTGTTGCTGGATTTAATTCCCTAGACTTGCTACCTGTAGCAACAGTTAATAGTATTA GAGTAGCCGATCAATTTTTATTAGCTATGGCTATGACTGCACTAGGGCTTGAGACTCATGTATCTAAATTTATCCAAGCC GGTATAAAACCTTTAATATTAGCATTAATACTATTTGCTTGGTTATTTTTTGGTGGCATAGCTATCACTTATGCTATAAC TAGCATAATCTAA
Upstream 100 bases:
>100_bases CATTTTCCTAATAATAGATATAAGTTCTTTTAGTTATAAAATAGCTAACTAATAATGTATATTTATATAAAACTTAATTA AAACAGCATATTGATAAATT
Downstream 100 bases:
>100_bases GCTCTTATTTAAGCAAAGCTATCCTATTTTTAAACTAAATAATGTATCATATCTAAAAATAATAATCTGATAACTTTTCA CAACCAATGAAACCTATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MKKHFTQPMILGVLLVAVLAGIAYFIAKIPTIKDLEISPLIIGIVLGMALTHTPASKIIHKWKEGVIFSAKKILRFAIIF YGFNLTFQLIASVGLARLSVSVIMLVSTLILGIVLGTKIFGLDRDSSILVAAGSAVCGAAAVLATEGTLKSEPYKAAMAV GTVVLFGTAAMFLYPILMKAGLLGHMTDAQYGIFAGGSIHEVAQVVAAGSGVSAHAEEVAVTVKMIRVMMLAPMLIVIGI WIAKSATTVTGANSSKPEKGSIKKIIPWFAIGFIIVAGFNSLDLLPVATVNSIRVADQFLLAMAMTALGLETHVSKFIQA GIKPLILALILFAWLFFGGIAITYAITSII
Sequences:
>Translated_350_residues MKKHFTQPMILGVLLVAVLAGIAYFIAKIPTIKDLEISPLIIGIVLGMALTHTPASKIIHKWKEGVIFSAKKILRFAIIF YGFNLTFQLIASVGLARLSVSVIMLVSTLILGIVLGTKIFGLDRDSSILVAAGSAVCGAAAVLATEGTLKSEPYKAAMAV GTVVLFGTAAMFLYPILMKAGLLGHMTDAQYGIFAGGSIHEVAQVVAAGSGVSAHAEEVAVTVKMIRVMMLAPMLIVIGI WIAKSATTVTGANSSKPEKGSIKKIIPWFAIGFIIVAGFNSLDLLPVATVNSIRVADQFLLAMAMTALGLETHVSKFIQA GIKPLILALILFAWLFFGGIAITYAITSII >Mature_350_residues MKKHFTQPMILGVLLVAVLAGIAYFIAKIPTIKDLEISPLIIGIVLGMALTHTPASKIIHKWKEGVIFSAKKILRFAIIF YGFNLTFQLIASVGLARLSVSVIMLVSTLILGIVLGTKIFGLDRDSSILVAAGSAVCGAAAVLATEGTLKSEPYKAAMAV GTVVLFGTAAMFLYPILMKAGLLGHMTDAQYGIFAGGSIHEVAQVVAAGSGVSAHAEEVAVTVKMIRVMMLAPMLIVIGI WIAKSATTVTGANSSKPEKGSIKKIIPWFAIGFIIVAGFNSLDLLPVATVNSIRVADQFLLAMAMTALGLETHVSKFIQA GIKPLILALILFAWLFFGGIAITYAITSII
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=350, Percent_Identity=49.1428571428571, Blast_Score=277, Evalue=7e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004630 - InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 36897; Mature: 36897
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHFTQPMILGVLLVAVLAGIAYFIAKIPTIKDLEISPLIIGIVLGMALTHTPASKIIH CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH KWKEGVIFSAKKILRFAIIFYGFNLTFQLIASVGLARLSVSVIMLVSTLILGIVLGTKIF HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLDRDSSILVAAGSAVCGAAAVLATEGTLKSEPYKAAMAVGTVVLFGTAAMFLYPILMKA CCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLGHMTDAQYGIFAGGSIHEVAQVVAAGSGVSAHAEEVAVTVKMIRVMMLAPMLIVIGI CHHHCCCCCCCCEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WIAKSATTVTGANSSKPEKGSIKKIIPWFAIGFIIVAGFNSLDLLPVATVNSIRVADQFL HHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHH LAMAMTALGLETHVSKFIQAGIKPLILALILFAWLFFGGIAITYAITSII HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKHFTQPMILGVLLVAVLAGIAYFIAKIPTIKDLEISPLIIGIVLGMALTHTPASKIIH CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH KWKEGVIFSAKKILRFAIIFYGFNLTFQLIASVGLARLSVSVIMLVSTLILGIVLGTKIF HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLDRDSSILVAAGSAVCGAAAVLATEGTLKSEPYKAAMAVGTVVLFGTAAMFLYPILMKA CCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLGHMTDAQYGIFAGGSIHEVAQVVAAGSGVSAHAEEVAVTVKMIRVMMLAPMLIVIGI CHHHCCCCCCCCEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WIAKSATTVTGANSSKPEKGSIKKIIPWFAIGFIIVAGFNSLDLLPVATVNSIRVADQFL HHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHH LAMAMTALGLETHVSKFIQAGIKPLILALILFAWLFFGGIAITYAITSII HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12910271 [H]