| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is yitL [H]
Identifier: 89256442
GI number: 89256442
Start: 1062845
End: 1063675
Strand: Direct
Name: yitL [H]
Synonym: FTL_1117
Alternate gene names: 89256442
Gene position: 1062845-1063675 (Clockwise)
Preceding gene: 89256441
Following gene: 89256444
Centisome position: 56.06
GC content: 31.53
Gene sequence:
>831_bases TTGATTTCAGTTGGAAAATATCACAAATTAGAAGTTCTCGATAAAAGAATAAATTGTTTAGTTTTAGATGCTTTAGAGCT TGGTGAAGCAAAATTGCCTGTAGTTGAAGTTGATAATATTATTAACATTGGGGATTATGTTGAAGTATTTTTGTATCATA ACTCTAAATCTGAGCTTGTAGCTACTACTAAGAAAGTTCCAACGGTGGGAGAGCTAGCGTACTTGTCAGTAAAAAACCTT ACCAAAATAGGAGCATTTCTTGATTGGGGTTTAGAAAAAGATCTTTTTGTACCATTAGCAGAGCAACATCGTCCTTTTGA GGTTGGCAAGTCGTATATTGTCTATCTTTACCTTGATAAAATAAATGGCAGAATTATAGCATCTTCAAAAATTAACAAGT TTATAAAAGATTATGCTAGTGATGAACTAAAGCTTAATCAAGAAGTAGATCTTATAATTGCTAACTCAACAAATATAGGT TATAAAGCGATTATCAATAATAGTTATTGGGGTATATTATATTCTTCAGAAGTGTTTAGAAGATTGAGTTTTGGACAATC TACCAAAGGATATATTAAAAACATCCGTGATGATGGTCGTATAGATTTATCTTTACAGCTAGTGCATAAAGATCTAGATA AAAATGCTGCACTTATTGAGAAATATCTTATAGCTCATGATGGTTCAGCACCATTTAATGATAAATCTAATCCTGAAGAT ATTATCCGCGAATTTGGGATTAGTAAAGCAGCATTTAAGCGCGCTATTGGGACACTTTTGAAGCAAAACAAAATTGTGAT AAGAGATAGTGGTATCTATTTGAATGGTTAA
Upstream 100 bases:
>100_bases AATTCAAAACAAAATATTTCAGCATTAAAGGATATGTTTGGCTAGTTTAAGCAAATATATGGTATGATTTACCTGCATAA AAATATCAAAGGTAATTATT
Downstream 100 bases:
>100_bases AAATCAATAAACTAAAGTCTATTTATAATATATATCGTTATTTCAACGAAAGCAGTGATTTCTTAATCAGTATAAAAATG TCTGTATCAAGCACAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MISVGKYHKLEVLDKRINCLVLDALELGEAKLPVVEVDNIINIGDYVEVFLYHNSKSELVATTKKVPTVGELAYLSVKNL TKIGAFLDWGLEKDLFVPLAEQHRPFEVGKSYIVYLYLDKINGRIIASSKINKFIKDYASDELKLNQEVDLIIANSTNIG YKAIINNSYWGILYSSEVFRRLSFGQSTKGYIKNIRDDGRIDLSLQLVHKDLDKNAALIEKYLIAHDGSAPFNDKSNPED IIREFGISKAAFKRAIGTLLKQNKIVIRDSGIYLNG
Sequences:
>Translated_276_residues MISVGKYHKLEVLDKRINCLVLDALELGEAKLPVVEVDNIINIGDYVEVFLYHNSKSELVATTKKVPTVGELAYLSVKNL TKIGAFLDWGLEKDLFVPLAEQHRPFEVGKSYIVYLYLDKINGRIIASSKINKFIKDYASDELKLNQEVDLIIANSTNIG YKAIINNSYWGILYSSEVFRRLSFGQSTKGYIKNIRDDGRIDLSLQLVHKDLDKNAALIEKYLIAHDGSAPFNDKSNPED IIREFGISKAAFKRAIGTLLKQNKIVIRDSGIYLNG >Mature_276_residues MISVGKYHKLEVLDKRINCLVLDALELGEAKLPVVEVDNIINIGDYVEVFLYHNSKSELVATTKKVPTVGELAYLSVKNL TKIGAFLDWGLEKDLFVPLAEQHRPFEVGKSYIVYLYLDKINGRIIASSKINKFIKDYASDELKLNQEVDLIIANSTNIG YKAIINNSYWGILYSSEVFRRLSFGQSTKGYIKNIRDDGRIDLSLQLVHKDLDKNAALIEKYLIAHDGSAPFNDKSNPED IIREFGISKAAFKRAIGTLLKQNKIVIRDSGIYLNG
Specific function: Unknown
COG id: COG2996
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 S1 motif domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016027 - InterPro: IPR003029 - InterPro: IPR022967 - InterPro: IPR014464 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31116; Mature: 31116
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISVGKYHKLEVLDKRINCLVLDALELGEAKLPVVEVDNIINIGDYVEVFLYHNSKSELV CCCCCCCHHHHHHHCCCCEEEEEHHHCCCCCCCEEEECCEECCCCEEEEEEEECCCCCEE ATTKKVPTVGELAYLSVKNLTKIGAFLDWGLEKDLFVPLAEQHRPFEVGKSYIVYLYLDK EECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHCCCCHHHCCEEEEEEEEEC INGRIIASSKINKFIKDYASDELKLNQEVDLIIANSTNIGYKAIINNSYWGILYSSEVFR CCCEEEEHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCCEEEEECCCEEEEEEHHHHHH RLSFGQSTKGYIKNIRDDGRIDLSLQLVHKDLDKNAALIEKYLIAHDGSAPFNDKSNPED HHHCCCCCHHHHHCCCCCCEEEEEEEEEHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHH IIREFGISKAAFKRAIGTLLKQNKIVIRDSGIYLNG HHHHHCCCHHHHHHHHHHHHHCCEEEEEECCEEECC >Mature Secondary Structure MISVGKYHKLEVLDKRINCLVLDALELGEAKLPVVEVDNIINIGDYVEVFLYHNSKSELV CCCCCCCHHHHHHHCCCCEEEEEHHHCCCCCCCEEEECCEECCCCEEEEEEEECCCCCEE ATTKKVPTVGELAYLSVKNLTKIGAFLDWGLEKDLFVPLAEQHRPFEVGKSYIVYLYLDK EECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHCCCCHHHCCEEEEEEEEEC INGRIIASSKINKFIKDYASDELKLNQEVDLIIANSTNIGYKAIINNSYWGILYSSEVFR CCCEEEEHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCCEEEEECCCEEEEEEHHHHHH RLSFGQSTKGYIKNIRDDGRIDLSLQLVHKDLDKNAALIEKYLIAHDGSAPFNDKSNPED HHHCCCCCHHHHHCCCCCCEEEEEEEEEHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHH IIREFGISKAAFKRAIGTLLKQNKIVIRDSGIYLNG HHHHHCCCHHHHHHHHHHHHHCCEEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353932; 9384377 [H]