Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

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The map label for this gene is yitL [H]

Identifier: 89256442

GI number: 89256442

Start: 1062845

End: 1063675

Strand: Direct

Name: yitL [H]

Synonym: FTL_1117

Alternate gene names: 89256442

Gene position: 1062845-1063675 (Clockwise)

Preceding gene: 89256441

Following gene: 89256444

Centisome position: 56.06

GC content: 31.53

Gene sequence:

>831_bases
TTGATTTCAGTTGGAAAATATCACAAATTAGAAGTTCTCGATAAAAGAATAAATTGTTTAGTTTTAGATGCTTTAGAGCT
TGGTGAAGCAAAATTGCCTGTAGTTGAAGTTGATAATATTATTAACATTGGGGATTATGTTGAAGTATTTTTGTATCATA
ACTCTAAATCTGAGCTTGTAGCTACTACTAAGAAAGTTCCAACGGTGGGAGAGCTAGCGTACTTGTCAGTAAAAAACCTT
ACCAAAATAGGAGCATTTCTTGATTGGGGTTTAGAAAAAGATCTTTTTGTACCATTAGCAGAGCAACATCGTCCTTTTGA
GGTTGGCAAGTCGTATATTGTCTATCTTTACCTTGATAAAATAAATGGCAGAATTATAGCATCTTCAAAAATTAACAAGT
TTATAAAAGATTATGCTAGTGATGAACTAAAGCTTAATCAAGAAGTAGATCTTATAATTGCTAACTCAACAAATATAGGT
TATAAAGCGATTATCAATAATAGTTATTGGGGTATATTATATTCTTCAGAAGTGTTTAGAAGATTGAGTTTTGGACAATC
TACCAAAGGATATATTAAAAACATCCGTGATGATGGTCGTATAGATTTATCTTTACAGCTAGTGCATAAAGATCTAGATA
AAAATGCTGCACTTATTGAGAAATATCTTATAGCTCATGATGGTTCAGCACCATTTAATGATAAATCTAATCCTGAAGAT
ATTATCCGCGAATTTGGGATTAGTAAAGCAGCATTTAAGCGCGCTATTGGGACACTTTTGAAGCAAAACAAAATTGTGAT
AAGAGATAGTGGTATCTATTTGAATGGTTAA

Upstream 100 bases:

>100_bases
AATTCAAAACAAAATATTTCAGCATTAAAGGATATGTTTGGCTAGTTTAAGCAAATATATGGTATGATTTACCTGCATAA
AAATATCAAAGGTAATTATT

Downstream 100 bases:

>100_bases
AAATCAATAAACTAAAGTCTATTTATAATATATATCGTTATTTCAACGAAAGCAGTGATTTCTTAATCAGTATAAAAATG
TCTGTATCAAGCACAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MISVGKYHKLEVLDKRINCLVLDALELGEAKLPVVEVDNIINIGDYVEVFLYHNSKSELVATTKKVPTVGELAYLSVKNL
TKIGAFLDWGLEKDLFVPLAEQHRPFEVGKSYIVYLYLDKINGRIIASSKINKFIKDYASDELKLNQEVDLIIANSTNIG
YKAIINNSYWGILYSSEVFRRLSFGQSTKGYIKNIRDDGRIDLSLQLVHKDLDKNAALIEKYLIAHDGSAPFNDKSNPED
IIREFGISKAAFKRAIGTLLKQNKIVIRDSGIYLNG

Sequences:

>Translated_276_residues
MISVGKYHKLEVLDKRINCLVLDALELGEAKLPVVEVDNIINIGDYVEVFLYHNSKSELVATTKKVPTVGELAYLSVKNL
TKIGAFLDWGLEKDLFVPLAEQHRPFEVGKSYIVYLYLDKINGRIIASSKINKFIKDYASDELKLNQEVDLIIANSTNIG
YKAIINNSYWGILYSSEVFRRLSFGQSTKGYIKNIRDDGRIDLSLQLVHKDLDKNAALIEKYLIAHDGSAPFNDKSNPED
IIREFGISKAAFKRAIGTLLKQNKIVIRDSGIYLNG
>Mature_276_residues
MISVGKYHKLEVLDKRINCLVLDALELGEAKLPVVEVDNIINIGDYVEVFLYHNSKSELVATTKKVPTVGELAYLSVKNL
TKIGAFLDWGLEKDLFVPLAEQHRPFEVGKSYIVYLYLDKINGRIIASSKINKFIKDYASDELKLNQEVDLIIANSTNIG
YKAIINNSYWGILYSSEVFRRLSFGQSTKGYIKNIRDDGRIDLSLQLVHKDLDKNAALIEKYLIAHDGSAPFNDKSNPED
IIREFGISKAAFKRAIGTLLKQNKIVIRDSGIYLNG

Specific function: Unknown

COG id: COG2996

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR014464 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31116; Mature: 31116

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVGKYHKLEVLDKRINCLVLDALELGEAKLPVVEVDNIINIGDYVEVFLYHNSKSELV
CCCCCCCHHHHHHHCCCCEEEEEHHHCCCCCCCEEEECCEECCCCEEEEEEEECCCCCEE
ATTKKVPTVGELAYLSVKNLTKIGAFLDWGLEKDLFVPLAEQHRPFEVGKSYIVYLYLDK
EECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHCCCCHHHCCEEEEEEEEEC
INGRIIASSKINKFIKDYASDELKLNQEVDLIIANSTNIGYKAIINNSYWGILYSSEVFR
CCCEEEEHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCCEEEEECCCEEEEEEHHHHHH
RLSFGQSTKGYIKNIRDDGRIDLSLQLVHKDLDKNAALIEKYLIAHDGSAPFNDKSNPED
HHHCCCCCHHHHHCCCCCCEEEEEEEEEHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHH
IIREFGISKAAFKRAIGTLLKQNKIVIRDSGIYLNG
HHHHHCCCHHHHHHHHHHHHHCCEEEEEECCEEECC
>Mature Secondary Structure
MISVGKYHKLEVLDKRINCLVLDALELGEAKLPVVEVDNIINIGDYVEVFLYHNSKSELV
CCCCCCCHHHHHHHCCCCEEEEEHHHCCCCCCCEEEECCEECCCCEEEEEEEECCCCCEE
ATTKKVPTVGELAYLSVKNLTKIGAFLDWGLEKDLFVPLAEQHRPFEVGKSYIVYLYLDK
EECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHCCCCHHHCCEEEEEEEEEC
INGRIIASSKINKFIKDYASDELKLNQEVDLIIANSTNIGYKAIINNSYWGILYSSEVFR
CCCEEEEHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCCEEEEECCCEEEEEEHHHHHH
RLSFGQSTKGYIKNIRDDGRIDLSLQLVHKDLDKNAALIEKYLIAHDGSAPFNDKSNPED
HHHCCCCCHHHHHCCCCCCEEEEEEEEEHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHH
IIREFGISKAAFKRAIGTLLKQNKIVIRDSGIYLNG
HHHHHCCCHHHHHHHHHHHHHCCEEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]