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The map label for this gene is tolC [H]

Identifier: 89256432

GI number: 89256432

Start: 1052322

End: 1053695

Strand: Direct

Name: tolC [H]

Synonym: FTL_1107

Alternate gene names: 89256432

Gene position: 1052322-1053695 (Clockwise)

Preceding gene: 89256431

Following gene: 89256433

Centisome position: 55.5

GC content: 32.97

Gene sequence:

>1374_bases
GTGCGTAGATATTTATTAATATCCTTGGGTATATTTGCTTATTGTGCTAGTAGTATAGCTAATCCTGTAGCTGACTATAC
TAGTACGATAAATCAATCAATAAATAATTCACCACAGTATAAGTTTATTGGCTTTCAGCTTAACTCAAGGCAAATGAGCC
CAGCGATACAGCTAGGTAGATTATTACCAAGTATAGATATCGGTGGTTCAATTACAGCAACAAATATTTTAGATAAAAGA
ACAATAGCCGATGGTGATATTGCTGGTGGACGTTTTGATTCGATTCAAGGTTTGGTAACTCTAACCCAACCACTATATGA
TTATGGTGCGTATAAGGATTTACAATCAGCTGAGGAAACAGCACAGTTTGCCCAACAGGATTATAGAACAAATTATCAGC
AATTTTTATATGATGTGAGTTACGCATATTTTAACCTTGCTAAAGCAATAAAAAACGTTCAGTATAATTCATATAACTTA
AAATCAAACAAACAAAGCTTAAATGAGCTTGAAAGTAAATTCAAAGCTGGTACTGCAGACGTTGCAGATTATGAAACTGT
CAAGGCTAACTATTATATAGCCGAGGCTGATTATGCAGCTGCAGAAAGAGAAGAAAAAGTTGCCCGTGCAGAATTACGTA
AATTTACTAATAATGATGATGATGTGCTCTTATATAATAATGATTTTAAGATTAAACAACCATCACTTAATACAGAAGAA
AGTTGGGAAGAGCTAACAATGCGTAGCAGCCCATCATATTTAGGTTCAATGCATACTAAAGAAAGTAAGTATTATGATTA
TCAATCAGCGACAAGCTCATTTATGCCTAAAGTTAACTTTGAAGTTAAGTATTCGCCGGGTTTTAATGATGTTAGTTCAC
TTGGTAACCCAGTATTTGATAATTTTTTACCATCTAAGGGTACGATAAATGCATTTTATTTTGGAATTAATTTAACATGG
AATATTTTTGCCGGCGTTACAGATTATGCTCAGTTGAAAAAAGCAGCTTATGATTATCAATCATCTGAGTTTACTATGAT
TCAAACTGGGAGGGTAGCGCAGAATGATGCGATGTATGCCTTTAGATTTGTCCAACTTAAGAAAAAAGAAATAGAATCGC
TACGTAAATCTGTTGCAGCAGCAAAGATTGCTTATGAGAAATATAAAGAACGCTACGACCAAGGTACAACAACGATTACT
CAGTATTTCATTCTTTTAAACCAATATTATCAATTTCTTATTCAACTTAACAATACTGAATTTGATTATATTATGGGATT
TTTAAGTTTATACAAAACAGCTGGTATTTTAACAGCTAAAACAGTGCAAGATTTTAATAATTGGTTACTATTAGGTCAAG
ACGTGGAGCTATAA

Upstream 100 bases:

>100_bases
CAAGGTGGTGGTAATAACTCTGCGAATATAGATCAAGCTTTATCTCAAGTAGAAAAATTTATTTTAAATAATATAAAAGA
GTAGTGGTGGCTTGAAAGTA

Downstream 100 bases:

>100_bases
AGATGTATATATCAACCAAATTAGAGTGTTTTACACAACATAAACAAAATGATTCTTTGCCAATTTTTGTGATTAATAAG
GATAATTTTACAAATTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MRRYLLISLGIFAYCASSIANPVADYTSTINQSINNSPQYKFIGFQLNSRQMSPAIQLGRLLPSIDIGGSITATNILDKR
TIADGDIAGGRFDSIQGLVTLTQPLYDYGAYKDLQSAEETAQFAQQDYRTNYQQFLYDVSYAYFNLAKAIKNVQYNSYNL
KSNKQSLNELESKFKAGTADVADYETVKANYYIAEADYAAAEREEKVARAELRKFTNNDDDVLLYNNDFKIKQPSLNTEE
SWEELTMRSSPSYLGSMHTKESKYYDYQSATSSFMPKVNFEVKYSPGFNDVSSLGNPVFDNFLPSKGTINAFYFGINLTW
NIFAGVTDYAQLKKAAYDYQSSEFTMIQTGRVAQNDAMYAFRFVQLKKKEIESLRKSVAAAKIAYEKYKERYDQGTTTIT
QYFILLNQYYQFLIQLNNTEFDYIMGFLSLYKTAGILTAKTVQDFNNWLLLGQDVEL

Sequences:

>Translated_457_residues
MRRYLLISLGIFAYCASSIANPVADYTSTINQSINNSPQYKFIGFQLNSRQMSPAIQLGRLLPSIDIGGSITATNILDKR
TIADGDIAGGRFDSIQGLVTLTQPLYDYGAYKDLQSAEETAQFAQQDYRTNYQQFLYDVSYAYFNLAKAIKNVQYNSYNL
KSNKQSLNELESKFKAGTADVADYETVKANYYIAEADYAAAEREEKVARAELRKFTNNDDDVLLYNNDFKIKQPSLNTEE
SWEELTMRSSPSYLGSMHTKESKYYDYQSATSSFMPKVNFEVKYSPGFNDVSSLGNPVFDNFLPSKGTINAFYFGINLTW
NIFAGVTDYAQLKKAAYDYQSSEFTMIQTGRVAQNDAMYAFRFVQLKKKEIESLRKSVAAAKIAYEKYKERYDQGTTTIT
QYFILLNQYYQFLIQLNNTEFDYIMGFLSLYKTAGILTAKTVQDFNNWLLLGQDVEL
>Mature_457_residues
MRRYLLISLGIFAYCASSIANPVADYTSTINQSINNSPQYKFIGFQLNSRQMSPAIQLGRLLPSIDIGGSITATNILDKR
TIADGDIAGGRFDSIQGLVTLTQPLYDYGAYKDLQSAEETAQFAQQDYRTNYQQFLYDVSYAYFNLAKAIKNVQYNSYNL
KSNKQSLNELESKFKAGTADVADYETVKANYYIAEADYAAAEREEKVARAELRKFTNNDDDVLLYNNDFKIKQPSLNTEE
SWEELTMRSSPSYLGSMHTKESKYYDYQSATSSFMPKVNFEVKYSPGFNDVSSLGNPVFDNFLPSKGTINAFYFGINLTW
NIFAGVTDYAQLKKAAYDYQSSEFTMIQTGRVAQNDAMYAFRFVQLKKKEIESLRKSVAAAKIAYEKYKERYDQGTTTIT
QYFILLNQYYQFLIQLNNTEFDYIMGFLSLYKTAGILTAKTVQDFNNWLLLGQDVEL

Specific function: May be specialized for signal sequence independent, extracellular secretion in Gram-negative bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=411, Percent_Identity=20.6812652068127, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 52147; Mature: 52147

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRYLLISLGIFAYCASSIANPVADYTSTINQSINNSPQYKFIGFQLNSRQMSPAIQLGR
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHH
LLPSIDIGGSITATNILDKRTIADGDIAGGRFDSIQGLVTLTQPLYDYGAYKDLQSAEET
HCCCCCCCCCEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AQFAQQDYRTNYQQFLYDVSYAYFNLAKAIKNVQYNSYNLKSNKQSLNELESKFKAGTAD
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC
VADYETVKANYYIAEADYAAAEREEKVARAELRKFTNNDDDVLLYNNDFKIKQPSLNTEE
CCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCCHH
SWEELTMRSSPSYLGSMHTKESKYYDYQSATSSFMPKVNFEVKYSPGFNDVSSLGNPVFD
HHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCHHHHCCCHHHH
NFLPSKGTINAFYFGINLTWNIFAGVTDYAQLKKAAYDYQSSEFTMIQTGRVAQNDAMYA
HCCCCCCCEEEEEEEEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHH
FRFVQLKKKEIESLRKSVAAAKIAYEKYKERYDQGTTTITQYFILLNQYYQFLIQLNNTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
FDYIMGFLSLYKTAGILTAKTVQDFNNWLLLGQDVEL
HHHHHHHHHHHHHCCCEEHHHHHHCCCEEEECCCCCC
>Mature Secondary Structure
MRRYLLISLGIFAYCASSIANPVADYTSTINQSINNSPQYKFIGFQLNSRQMSPAIQLGR
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHH
LLPSIDIGGSITATNILDKRTIADGDIAGGRFDSIQGLVTLTQPLYDYGAYKDLQSAEET
HCCCCCCCCCEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AQFAQQDYRTNYQQFLYDVSYAYFNLAKAIKNVQYNSYNLKSNKQSLNELESKFKAGTAD
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC
VADYETVKANYYIAEADYAAAEREEKVARAELRKFTNNDDDVLLYNNDFKIKQPSLNTEE
CCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCCHH
SWEELTMRSSPSYLGSMHTKESKYYDYQSATSSFMPKVNFEVKYSPGFNDVSSLGNPVFD
HHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCHHHHCCCHHHH
NFLPSKGTINAFYFGINLTWNIFAGVTDYAQLKKAAYDYQSSEFTMIQTGRVAQNDAMYA
HCCCCCCCEEEEEEEEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHH
FRFVQLKKKEIESLRKSVAAAKIAYEKYKERYDQGTTTITQYFILLNQYYQFLIQLNNTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
FDYIMGFLSLYKTAGILTAKTVQDFNNWLLLGQDVEL
HHHHHHHHHHHHHCCCEEHHHHHHCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]