Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256426
Identifier: 89256426
GI number: 89256426
Start: 1043815
End: 1044936
Strand: Reverse
Name: 89256426
Synonym: FTL_1096
Alternate gene names: NA
Gene position: 1044936-1043815 (Counterclockwise)
Preceding gene: 89256427
Following gene: 89256424
Centisome position: 55.11
GC content: 36.1
Gene sequence:
>1122_bases ATGACTAAGAAAAAACTTTTAAAAGCATTAGCTGTTGCTGCTATTGCAACAAGTTTAGTAGCTTGCTCAGATAGTTCTAG CAATGATAAAACTTCAACTACTGCTGTTAGCTCCGGTTCTAGTGTAGCTACAACTACAGTAGCAGCTCCTGCAGATAACA CTAACGTTACAGCTAACGCAAGCTATACTATTGGTTATGGTATGGGTTCAAGTATAGCAACTGATAAAAATATCAAAACT TTCAATTTTAATAATGATAAGGTTATGGCTGGATTTGAAGATGCTATAAATGCTAAAAAACCAGCTATTCCACTAGAAGA TATCGCAAATAATATGAATACTCTACGCGATAAGATGCAACAGCAAATGAATCAAAAAGCTGTAACTAGTTTCTTAAGTG TTCAAGATGGTATCTATAACTCTGATCTAACACCTAAGTCTGATATAAAAAATCCTGATGTAGTTGTTTATGAATTCTTT GATTATCAATGTATGTACTGTTCTAAGCTTGCTCCTGAGATAGAAAAGATTATGAAGGATAATAGTGATGTACAAGTAGT TTTTGCAGAGTTCCCAATATTTGGTCAGAAATTACCTGCTTCTGAATATGCTGCAGAAGTTAGTACTGCTATTTACAAAT TATATGGTGCTGATGCTTATGTTAAATATCACAACGGTATCTTTGCAACAGGTGAAGATGAAGGTAGCCTAAAGAACGCA ACTGTTGATAATGTAGCTAAACAAGCTGGCGCAGATATGACTAAAGTCAACAAAGCTATCCAAGATGATAAGATTGCTGA TCATCTTAAAGATATGCTAAAAATGGGCTTTGGTCAACTTGGAATCCAAGGCGCGCCATTCCTAGTAATAGCTCCTGCTA AAAATGCTACAGTTGCTAATACTACTATAATTGGTGGTTATACTACTGCTGATGGTATCCAAGCAGCTATCAACAAAGCT AAGTCTACAGCTACAACAACTAGTACTAGCAATAATGGGCAAACTGATACTAAGCATTCTCAAAACGATATCGCTACAGT GACAGCTGAAGCTCAAGCAATATCAGGCAGCACAGAGCAATTAGCTCAGCAAAGCCAAGATGATGATAGTGTTGAAGCTT AA
Upstream 100 bases:
>100_bases AATCAAAACTAACTCCAGATCAAATGCAAAATGCAATGATTGAATTCCAAAAGCAAGAAATGGCTGCTCAAAAGAAATAA GTTAAAGGAGTAAATTTAGA
Downstream 100 bases:
>100_bases TTAGATTAATCTATAAAAGTTTAAAAATGCTTTCTGCTTAGTGTTTTTATCATTAATAACAATAAGCGGACATAATATAA GTATGACCTTATTTTTTGGT
Product: lipoprotein
Products: NA
Alternate protein names: Outer Membrane Protein; Dsba Oxidoreductase; ThiolDisulfide Interchange Protein DsbA; Lipoprotein; Disulfide Bond Formation Protein D; DSBA-Like Thioredoxin Domain Protein; DSBA-Like Thioredoxin Domain-Containing Protein; Oxidoreductase; BcfH Protein; Protein-Disulfide Isomerase; Thiol-Disulfide Isomerase; 27 KDa Outer Membrane Protein
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MTKKKLLKALAVAAIATSLVACSDSSSNDKTSTTAVSSGSSVATTTVAAPADNTNVTANASYTIGYGMGSSIATDKNIKT FNFNNDKVMAGFEDAINAKKPAIPLEDIANNMNTLRDKMQQQMNQKAVTSFLSVQDGIYNSDLTPKSDIKNPDVVVYEFF DYQCMYCSKLAPEIEKIMKDNSDVQVVFAEFPIFGQKLPASEYAAEVSTAIYKLYGADAYVKYHNGIFATGEDEGSLKNA TVDNVAKQAGADMTKVNKAIQDDKIADHLKDMLKMGFGQLGIQGAPFLVIAPAKNATVANTTIIGGYTTADGIQAAINKA KSTATTTSTSNNGQTDTKHSQNDIATVTAEAQAISGSTEQLAQQSQDDDSVEA
Sequences:
>Translated_373_residues MTKKKLLKALAVAAIATSLVACSDSSSNDKTSTTAVSSGSSVATTTVAAPADNTNVTANASYTIGYGMGSSIATDKNIKT FNFNNDKVMAGFEDAINAKKPAIPLEDIANNMNTLRDKMQQQMNQKAVTSFLSVQDGIYNSDLTPKSDIKNPDVVVYEFF DYQCMYCSKLAPEIEKIMKDNSDVQVVFAEFPIFGQKLPASEYAAEVSTAIYKLYGADAYVKYHNGIFATGEDEGSLKNA TVDNVAKQAGADMTKVNKAIQDDKIADHLKDMLKMGFGQLGIQGAPFLVIAPAKNATVANTTIIGGYTTADGIQAAINKA KSTATTTSTSNNGQTDTKHSQNDIATVTAEAQAISGSTEQLAQQSQDDDSVEA >Mature_372_residues TKKKLLKALAVAAIATSLVACSDSSSNDKTSTTAVSSGSSVATTTVAAPADNTNVTANASYTIGYGMGSSIATDKNIKTF NFNNDKVMAGFEDAINAKKPAIPLEDIANNMNTLRDKMQQQMNQKAVTSFLSVQDGIYNSDLTPKSDIKNPDVVVYEFFD YQCMYCSKLAPEIEKIMKDNSDVQVVFAEFPIFGQKLPASEYAAEVSTAIYKLYGADAYVKYHNGIFATGEDEGSLKNAT VDNVAKQAGADMTKVNKAIQDDKIADHLKDMLKMGFGQLGIQGAPFLVIAPAKNATVANTTIIGGYTTADGIQAAINKAK STATTTSTSNNGQTDTKHSQNDIATVTAEAQAISGSTEQLAQQSQDDDSVEA
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39545; Mature: 39414
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKKLLKALAVAAIATSLVACSDSSSNDKTSTTAVSSGSSVATTTVAAPADNTNVTANA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCEEECC SYTIGYGMGSSIATDKNIKTFNFNNDKVMAGFEDAINAKKPAIPLEDIANNMNTLRDKMQ EEEEECCCCCCCCCCCCCEEEECCCCEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHHHH QQMNQKAVTSFLSVQDGIYNSDLTPKSDIKNPDVVVYEFFDYQCMYCSKLAPEIEKIMKD HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC NSDVQVVFAEFPIFGQKLPASEYAAEVSTAIYKLYGADAYVKYHNGIFATGEDEGSLKNA CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCCCCCC TVDNVAKQAGADMTKVNKAIQDDKIADHLKDMLKMGFGQLGIQGAPFLVIAPAKNATVAN HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEC TTIIGGYTTADGIQAAINKAKSTATTTSTSNNGQTDTKHSQNDIATVTAEAQAISGSTEQ EEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCHHH LAQQSQDDDSVEA HHHHCCCCCCCCC >Mature Secondary Structure TKKKLLKALAVAAIATSLVACSDSSSNDKTSTTAVSSGSSVATTTVAAPADNTNVTANA CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCEEECC SYTIGYGMGSSIATDKNIKTFNFNNDKVMAGFEDAINAKKPAIPLEDIANNMNTLRDKMQ EEEEECCCCCCCCCCCCCEEEECCCCEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHHHH QQMNQKAVTSFLSVQDGIYNSDLTPKSDIKNPDVVVYEFFDYQCMYCSKLAPEIEKIMKD HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC NSDVQVVFAEFPIFGQKLPASEYAAEVSTAIYKLYGADAYVKYHNGIFATGEDEGSLKNA CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCCCCCC TVDNVAKQAGADMTKVNKAIQDDKIADHLKDMLKMGFGQLGIQGAPFLVIAPAKNATVAN HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEC TTIIGGYTTADGIQAAINKAKSTATTTSTSNNGQTDTKHSQNDIATVTAEAQAISGSTEQ EEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCHHH LAQQSQDDDSVEA HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA