Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is 89256426

Identifier: 89256426

GI number: 89256426

Start: 1043815

End: 1044936

Strand: Reverse

Name: 89256426

Synonym: FTL_1096

Alternate gene names: NA

Gene position: 1044936-1043815 (Counterclockwise)

Preceding gene: 89256427

Following gene: 89256424

Centisome position: 55.11

GC content: 36.1

Gene sequence:

>1122_bases
ATGACTAAGAAAAAACTTTTAAAAGCATTAGCTGTTGCTGCTATTGCAACAAGTTTAGTAGCTTGCTCAGATAGTTCTAG
CAATGATAAAACTTCAACTACTGCTGTTAGCTCCGGTTCTAGTGTAGCTACAACTACAGTAGCAGCTCCTGCAGATAACA
CTAACGTTACAGCTAACGCAAGCTATACTATTGGTTATGGTATGGGTTCAAGTATAGCAACTGATAAAAATATCAAAACT
TTCAATTTTAATAATGATAAGGTTATGGCTGGATTTGAAGATGCTATAAATGCTAAAAAACCAGCTATTCCACTAGAAGA
TATCGCAAATAATATGAATACTCTACGCGATAAGATGCAACAGCAAATGAATCAAAAAGCTGTAACTAGTTTCTTAAGTG
TTCAAGATGGTATCTATAACTCTGATCTAACACCTAAGTCTGATATAAAAAATCCTGATGTAGTTGTTTATGAATTCTTT
GATTATCAATGTATGTACTGTTCTAAGCTTGCTCCTGAGATAGAAAAGATTATGAAGGATAATAGTGATGTACAAGTAGT
TTTTGCAGAGTTCCCAATATTTGGTCAGAAATTACCTGCTTCTGAATATGCTGCAGAAGTTAGTACTGCTATTTACAAAT
TATATGGTGCTGATGCTTATGTTAAATATCACAACGGTATCTTTGCAACAGGTGAAGATGAAGGTAGCCTAAAGAACGCA
ACTGTTGATAATGTAGCTAAACAAGCTGGCGCAGATATGACTAAAGTCAACAAAGCTATCCAAGATGATAAGATTGCTGA
TCATCTTAAAGATATGCTAAAAATGGGCTTTGGTCAACTTGGAATCCAAGGCGCGCCATTCCTAGTAATAGCTCCTGCTA
AAAATGCTACAGTTGCTAATACTACTATAATTGGTGGTTATACTACTGCTGATGGTATCCAAGCAGCTATCAACAAAGCT
AAGTCTACAGCTACAACAACTAGTACTAGCAATAATGGGCAAACTGATACTAAGCATTCTCAAAACGATATCGCTACAGT
GACAGCTGAAGCTCAAGCAATATCAGGCAGCACAGAGCAATTAGCTCAGCAAAGCCAAGATGATGATAGTGTTGAAGCTT
AA

Upstream 100 bases:

>100_bases
AATCAAAACTAACTCCAGATCAAATGCAAAATGCAATGATTGAATTCCAAAAGCAAGAAATGGCTGCTCAAAAGAAATAA
GTTAAAGGAGTAAATTTAGA

Downstream 100 bases:

>100_bases
TTAGATTAATCTATAAAAGTTTAAAAATGCTTTCTGCTTAGTGTTTTTATCATTAATAACAATAAGCGGACATAATATAA
GTATGACCTTATTTTTTGGT

Product: lipoprotein

Products: NA

Alternate protein names: Outer Membrane Protein; Dsba Oxidoreductase; ThiolDisulfide Interchange Protein DsbA; Lipoprotein; Disulfide Bond Formation Protein D; DSBA-Like Thioredoxin Domain Protein; DSBA-Like Thioredoxin Domain-Containing Protein; Oxidoreductase; BcfH Protein; Protein-Disulfide Isomerase; Thiol-Disulfide Isomerase; 27 KDa Outer Membrane Protein

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MTKKKLLKALAVAAIATSLVACSDSSSNDKTSTTAVSSGSSVATTTVAAPADNTNVTANASYTIGYGMGSSIATDKNIKT
FNFNNDKVMAGFEDAINAKKPAIPLEDIANNMNTLRDKMQQQMNQKAVTSFLSVQDGIYNSDLTPKSDIKNPDVVVYEFF
DYQCMYCSKLAPEIEKIMKDNSDVQVVFAEFPIFGQKLPASEYAAEVSTAIYKLYGADAYVKYHNGIFATGEDEGSLKNA
TVDNVAKQAGADMTKVNKAIQDDKIADHLKDMLKMGFGQLGIQGAPFLVIAPAKNATVANTTIIGGYTTADGIQAAINKA
KSTATTTSTSNNGQTDTKHSQNDIATVTAEAQAISGSTEQLAQQSQDDDSVEA

Sequences:

>Translated_373_residues
MTKKKLLKALAVAAIATSLVACSDSSSNDKTSTTAVSSGSSVATTTVAAPADNTNVTANASYTIGYGMGSSIATDKNIKT
FNFNNDKVMAGFEDAINAKKPAIPLEDIANNMNTLRDKMQQQMNQKAVTSFLSVQDGIYNSDLTPKSDIKNPDVVVYEFF
DYQCMYCSKLAPEIEKIMKDNSDVQVVFAEFPIFGQKLPASEYAAEVSTAIYKLYGADAYVKYHNGIFATGEDEGSLKNA
TVDNVAKQAGADMTKVNKAIQDDKIADHLKDMLKMGFGQLGIQGAPFLVIAPAKNATVANTTIIGGYTTADGIQAAINKA
KSTATTTSTSNNGQTDTKHSQNDIATVTAEAQAISGSTEQLAQQSQDDDSVEA
>Mature_372_residues
TKKKLLKALAVAAIATSLVACSDSSSNDKTSTTAVSSGSSVATTTVAAPADNTNVTANASYTIGYGMGSSIATDKNIKTF
NFNNDKVMAGFEDAINAKKPAIPLEDIANNMNTLRDKMQQQMNQKAVTSFLSVQDGIYNSDLTPKSDIKNPDVVVYEFFD
YQCMYCSKLAPEIEKIMKDNSDVQVVFAEFPIFGQKLPASEYAAEVSTAIYKLYGADAYVKYHNGIFATGEDEGSLKNAT
VDNVAKQAGADMTKVNKAIQDDKIADHLKDMLKMGFGQLGIQGAPFLVIAPAKNATVANTTIIGGYTTADGIQAAINKAK
STATTTSTSNNGQTDTKHSQNDIATVTAEAQAISGSTEQLAQQSQDDDSVEA

Specific function: Unknown

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39545; Mature: 39414

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKKLLKALAVAAIATSLVACSDSSSNDKTSTTAVSSGSSVATTTVAAPADNTNVTANA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCEEECC
SYTIGYGMGSSIATDKNIKTFNFNNDKVMAGFEDAINAKKPAIPLEDIANNMNTLRDKMQ
EEEEECCCCCCCCCCCCCEEEECCCCEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
QQMNQKAVTSFLSVQDGIYNSDLTPKSDIKNPDVVVYEFFDYQCMYCSKLAPEIEKIMKD
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC
NSDVQVVFAEFPIFGQKLPASEYAAEVSTAIYKLYGADAYVKYHNGIFATGEDEGSLKNA
CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCCCCCC
TVDNVAKQAGADMTKVNKAIQDDKIADHLKDMLKMGFGQLGIQGAPFLVIAPAKNATVAN
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEC
TTIIGGYTTADGIQAAINKAKSTATTTSTSNNGQTDTKHSQNDIATVTAEAQAISGSTEQ
EEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCHHH
LAQQSQDDDSVEA
HHHHCCCCCCCCC
>Mature Secondary Structure 
TKKKLLKALAVAAIATSLVACSDSSSNDKTSTTAVSSGSSVATTTVAAPADNTNVTANA
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCEEECC
SYTIGYGMGSSIATDKNIKTFNFNNDKVMAGFEDAINAKKPAIPLEDIANNMNTLRDKMQ
EEEEECCCCCCCCCCCCCEEEECCCCEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
QQMNQKAVTSFLSVQDGIYNSDLTPKSDIKNPDVVVYEFFDYQCMYCSKLAPEIEKIMKD
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC
NSDVQVVFAEFPIFGQKLPASEYAAEVSTAIYKLYGADAYVKYHNGIFATGEDEGSLKNA
CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCCCCCC
TVDNVAKQAGADMTKVNKAIQDDKIADHLKDMLKMGFGQLGIQGAPFLVIAPAKNATVAN
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEC
TTIIGGYTTADGIQAAINKAKSTATTTSTSNNGQTDTKHSQNDIATVTAEAQAISGSTEQ
EEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCHHH
LAQQSQDDDSVEA
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA