Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256419
Identifier: 89256419
GI number: 89256419
Start: 1034661
End: 1034876
Strand: Reverse
Name: 89256419
Synonym: FTL_1085
Alternate gene names: NA
Gene position: 1034876-1034661 (Counterclockwise)
Preceding gene: 89256421
Following gene: 89256418
Centisome position: 54.58
GC content: 27.31
Gene sequence:
>216_bases ATGAGCATTAAAAAATTAGACATTTTTAATTATGCATTCATAGCTTTTCCAGTAGCATTTGCGAGTATTCCAATATATAT TTTTCTTCCAGAATATTACCATACAAATTATGGTATAAATTTAGCTATTTTGAGTGTGGTTTTATTTATACTTAGAGCTC TTGATGCAATTTTTGATCCGTTAATTGGCTGGTTTGTGATAGATTTCATTATCTAA
Upstream 100 bases:
>100_bases TAATAATCTAACAACCAAATTAACAAGCTTAAAAAGTTTTAATCTAAACTTAGAAATAATAGTGCTATCATAAAATATAA TATAATTACTCATCTCATCT
Downstream 100 bases:
>100_bases GTAAAATAAGCTTAGTTGCTATTATAACTATGTTTATTATAAGGGTTTTTATCTATATGTATCCCCGTGTTCTCAAATAT GATTTTAAACCTTGGCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: SugarCation Symporter Family Protein
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MSIKKLDIFNYAFIAFPVAFASIPIYIFLPEYYHTNYGINLAILSVVLFILRALDAIFDPLIGWFVIDFII
Sequences:
>Translated_71_residues MSIKKLDIFNYAFIAFPVAFASIPIYIFLPEYYHTNYGINLAILSVVLFILRALDAIFDPLIGWFVIDFII >Mature_70_residues SIKKLDIFNYAFIAFPVAFASIPIYIFLPEYYHTNYGINLAILSVVLFILRALDAIFDPLIGWFVIDFII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8206; Mature: 8075
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKKLDIFNYAFIAFPVAFASIPIYIFLPEYYHTNYGINLAILSVVLFILRALDAIFDP CCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LIGWFVIDFII HHHHHHHHHHC >Mature Secondary Structure SIKKLDIFNYAFIAFPVAFASIPIYIFLPEYYHTNYGINLAILSVVLFILRALDAIFDP CCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LIGWFVIDFII HHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA