Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is isftu1
Identifier: 89256359
GI number: 89256359
Start: 978659
End: 978985
Strand: Direct
Name: isftu1
Synonym: FTL_1020
Alternate gene names: NA
Gene position: 978659-978985 (Clockwise)
Preceding gene: 89256355
Following gene: 89256362
Centisome position: 51.62
GC content: 33.64
Gene sequence:
>881_bases ATGCCATCATATAGCCAAGATTTTAGAGACATCGTAATTAATAAATATGAAGAAGGTATGACGGAGTTCGAGCTGAGTAA GTTTTTTAACATAGATAAGCGTACAGTTGTTTCATGGATAGAGCTTTATAAAAGAACCGGAGATTATAGTTCAAGGCAAG GAGTTGGTTGTGGCAGAGTCGCTAGCTTTACCGATAAAACATTGATTGAACAGTATTTGATAGATCATCCAGATGCAAGT ACATTAGATATAAAAGAAGCATTAGCCCCTGATATTCCAAGAAGTACATTTTATGATTGTCTTAATATACTTGGTTTTAG TTTTAAAAAAAGACTCCAAAATATAAGCAAAGAAAAGAACATGAAAGGTTGGAGTATATAGAAAAACTAAAAGAAATAGC TCAAAACTTGTTATTTTATATAGATGAGATGGGGTGTGACAATAAGCTTTCTATCCTAAGAGGATGGTCACTAATTGGTG AGCCTAGTTATGGCGAGGTTTTAGCATATCAAACACAAAGAAGAAGTATTGTTGCTGGATATAATTATGCAGATAAAAAG ATTATAGCTCCATTAGAGTACAGCGGATATACCAATACTGAAATTTTTAATCAATGGTTTGAGGAACACTTATGCCCATC ATTAAAACCTAAAACTACTATAGTAATGGATAATGCTAGTTTCCATAAATCCTCTAAGCTGATTGAAATAGCCAATAAAT TTGATGTACAAATATTATATCTACCTCCGTACTCTCCAGATTTAAATCCTATTGAAAAGGTTTGGGCTAACTTTAAAAAA ATATTTAGAAAAGTGAATAATAGTTTTGAAAAATTTTGTGATGCTATCTCTTATGTGTTTAACAAAATACTCTCGGATTA A
Upstream 100 bases:
>100_bases CTAATATAGTAGTCATTATTAGTTTTATATACTCTATAGTTAATCCGAAAGATATTTGTAGAAAAAGATATTTGTAGAAA TGTTATAATGTCTAATAAAA
Downstream 100 bases:
>100_bases CTATAAAAGATAAATCAGCACCATAACCATGATTTGTTGTTAGTATTGTTTTTATCTTATTAGCTTTGCTAAGTAGGTAA GCAATATTAAACCTAATACC
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>293_residues MPSYSQDFRDIVINKYEEGMTEFELSKFFNIDKRTVVSWIELYKRTGDYSSRQGVGCGRVASFTDKTLIEQYLIDHPDAS TLDIKEALAPDIPRSTFYDCLNILGFSFKKKTPKYKQRKEHERLEYIEKLKEIAQNLLFYIDEMGCDNKLSILRGWSLIG EPSYGEVLAYQTQRRSIVAGYNYADKKIIAPLEYSGYTNTEIFNQWFEEHLCPSLKPKTTIVMDNASFHKSSKLIEIANK FDVQILYLPPYSPDLNPIEKVWANFKKIFRKVNNSFEKFCDAISYVFNKILSD
Sequences:
>Translated_109_residues MPSYSQDFRDIVINKYEEGMTEFELSKFFNIDKRTVVSWIELYKRTGDYSSRQGVGCGRVASFTDKTLIEQYLIDHPDAS TLDIKEALAPDIPRSTFYDCLNILGFSFK >Mature_108_residues PSYSQDFRDIVINKYEEGMTEFELSKFFNIDKRTVVSWIELYKRTGDYSSRQGVGCGRVASFTDKTLIEQYLIDHPDAST LDIKEALAPDIPRSTFYDCLNILGFSFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12595; Mature: 12464
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSYSQDFRDIVINKYEEGMTEFELSKFFNIDKRTVVSWIELYKRTGDYSSRQGVGCGRV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH ASFTDKTLIEQYLIDHPDASTLDIKEALAPDIPRSTFYDCLNILGFSFK HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure PSYSQDFRDIVINKYEEGMTEFELSKFFNIDKRTVVSWIELYKRTGDYSSRQGVGCGRV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH ASFTDKTLIEQYLIDHPDASTLDIKEALAPDIPRSTFYDCLNILGFSFK HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA