Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256354
Identifier: 89256354
GI number: 89256354
Start: 975480
End: 976004
Strand: Direct
Name: 89256354
Synonym: FTL_1015
Alternate gene names: NA
Gene position: 975480-976004 (Clockwise)
Preceding gene: 89256352
Following gene: 89256355
Centisome position: 51.45
GC content: 33.33
Gene sequence:
>525_bases ATGACTAAAAAAGTACCTAATGTAACTTTTAAAACAAGAGTAAGAGATGAGGGTATTGGCGGTTCAAATCCATTTAGATG GCAAGATGTAACATCAGCTGATATTTTTGATAATAAAAGAGTAATTGTATTCTCATTACCAGGAGCATTTACACCAACTT GTTCAACTTATCAATTACCAGGTTTTGAAAATAACGCAGCTAGATTCAAAGAGCTAGGTATAGATGAGATTTATGTTTTA TCGGTAAACGATAGCTTTGTTATGAACAAGTGGATTCAGGTTCAGGGAATTCAAAATATTAAACCGATTCCAGATGGTAA TGGTGAATTTACTGAAGCTTTAGATATGCTTGTTGATAAATCAAATATTGGTTTTGGCAAAAGATCTTGGCGCTATGCAA TGATTGTAAATAATGGTGAAATCGAGAAAATGTTTGTTGAGCCTGGAAAGCGTGATAATGCAGATAATGATCCGTATGGT GAGTCTTCTCCAGAAAACTTATTGAAGTATTTAGAGTCTAAGTAA
Upstream 100 bases:
>100_bases CATAACTAAATCTTATAGTTACTATAAATATTATATATTTTAAATTATGTGCAAGAGTAATACAATAATAGCGTAGCTTA ACAAAACAAAGGAGTTAGAC
Downstream 100 bases:
>100_bases TTATGAAAAGGATTATTGTTTTTGGTGCGACCGGAACTATTGGTAGAGCAACTACAAAGTCTCTGAAAAATGCTGGTTAT GAAATAGTAACTGTAAGTTT
Product: AhpC/TSA family protein
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTKKVPNVTFKTRVRDEGIGGSNPFRWQDVTSADIFDNKRVIVFSLPGAFTPTCSTYQLPGFENNAARFKELGIDEIYVL SVNDSFVMNKWIQVQGIQNIKPIPDGNGEFTEALDMLVDKSNIGFGKRSWRYAMIVNNGEIEKMFVEPGKRDNADNDPYG ESSPENLLKYLESK
Sequences:
>Translated_174_residues MTKKVPNVTFKTRVRDEGIGGSNPFRWQDVTSADIFDNKRVIVFSLPGAFTPTCSTYQLPGFENNAARFKELGIDEIYVL SVNDSFVMNKWIQVQGIQNIKPIPDGNGEFTEALDMLVDKSNIGFGKRSWRYAMIVNNGEIEKMFVEPGKRDNADNDPYG ESSPENLLKYLESK >Mature_173_residues TKKVPNVTFKTRVRDEGIGGSNPFRWQDVTSADIFDNKRVIVFSLPGAFTPTCSTYQLPGFENNAARFKELGIDEIYVLS VNDSFVMNKWIQVQGIQNIKPIPDGNGEFTEALDMLVDKSNIGFGKRSWRYAMIVNNGEIEKMFVEPGKRDNADNDPYGE SSPENLLKYLESK
Specific function: Unknown
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=122, Percent_Identity=36.8852459016393, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI78706776, Length=121, Percent_Identity=42.1487603305785, Blast_Score=103, Evalue=5e-23, Organism=Drosophila melanogaster, GI78709078, Length=121, Percent_Identity=42.1487603305785, Blast_Score=103, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013740 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 19668; Mature: 19537
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKVPNVTFKTRVRDEGIGGSNPFRWQDVTSADIFDNKRVIVFSLPGAFTPTCSTYQLP CCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEECC GFENNAARFKELGIDEIYVLSVNDSFVMNKWIQVQGIQNIKPIPDGNGEFTEALDMLVDK CCCCCHHHHHHCCCCEEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCC SNIGFGKRSWRYAMIVNNGEIEKMFVEPGKRDNADNDPYGESSPENLLKYLESK CCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure TKKVPNVTFKTRVRDEGIGGSNPFRWQDVTSADIFDNKRVIVFSLPGAFTPTCSTYQLP CCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEECC GFENNAARFKELGIDEIYVLSVNDSFVMNKWIQVQGIQNIKPIPDGNGEFTEALDMLVDK CCCCCHHHHHHCCCCEEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCC SNIGFGKRSWRYAMIVNNGEIEKMFVEPGKRDNADNDPYGESSPENLLKYLESK CCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9658006 [H]