Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
---|---|
Accession | NC_007880 |
Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is 89256346
Identifier: 89256346
GI number: 89256346
Start: 967658
End: 968410
Strand: Direct
Name: 89256346
Synonym: FTL_1002
Alternate gene names: NA
Gene position: 967658-968410 (Clockwise)
Preceding gene: 89256345
Following gene: 89256347
Centisome position: 51.04
GC content: 32.27
Gene sequence:
>753_bases ATGTATGGTAACTTTGATATAGTATCAAACTATGTTCCAACATTAACTCGAACATATTTTATGCAGTCAGGCGGCAATAT CAATCTTTCTTATCATACCCAAGATTTACATTTAAACGCTGTACTTTTAGATGCTAATCCTAATAGTTATTTTAATGTCA CAAATGCTGGAAGTAAAAGTGGGGTAGGTTTTGCGTTAAATAGTAAGTATATTTATCAAATGGAAACAGCAGGAGATTAC CAGTTTCTTGGTTTAGCTTATTCAAATGTTTCAGGATTTCAGACAAAAAATGGTGGTAACGTTGGTACATTCGATGTCAA TTATGGTTTGGCAATTTCAGATATAAACTTTGAAGCCGAAGCATTAATAACTGATAAAGGAGTAGGAGAGATTAATAACT CATCTTCGGTTAGCCCAAATAATATTGCAGGTGTTCCTTTTTTTGGCTCGGTAGGTCCAAGTGCTAAATTGATATATGAT GGCTTTTTAGGTTCTGGTGCTAATGTAGCATCATGGTCTACACAAACAAGTTATACAGCTACAGTTTTTAATAGACGGGT TATCCCATATGTTGATTATTCTCAAATACTTCAAAATCCCAAAAACTACTCATATCAATATGGCGCTGGCTTTAGAGTTA ATGTATTTTATGGTTCTTGGTTAGGACTTGATTATACTAATATAAATTCACGTAGTTCAAATTTTAAGGAAACCCAGAAT TATCTTTCTATAAACTATACATTATATTTATAA
Upstream 100 bases:
>100_bases TCACCGTAATGGCTTTAATATAACGCCAAATACGATATATCTGATTTTAGGTAATCTCTCAGAAAGTCCATTTTTTGGCT ATGTGGCAAACTCAACGGTA
Downstream 100 bases:
>100_bases GAATCTATTGTTATAATTAGTCATTAGTAATGATATATATACTATTTTTTAGAATGTCACGACAAGTTTTTATAGATACT GAGACAACTGGCTTTGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MYGNFDIVSNYVPTLTRTYFMQSGGNINLSYHTQDLHLNAVLLDANPNSYFNVTNAGSKSGVGFALNSKYIYQMETAGDY QFLGLAYSNVSGFQTKNGGNVGTFDVNYGLAISDINFEAEALITDKGVGEINNSSSVSPNNIAGVPFFGSVGPSAKLIYD GFLGSGANVASWSTQTSYTATVFNRRVIPYVDYSQILQNPKNYSYQYGAGFRVNVFYGSWLGLDYTNINSRSSNFKETQN YLSINYTLYL
Sequences:
>Translated_250_residues MYGNFDIVSNYVPTLTRTYFMQSGGNINLSYHTQDLHLNAVLLDANPNSYFNVTNAGSKSGVGFALNSKYIYQMETAGDY QFLGLAYSNVSGFQTKNGGNVGTFDVNYGLAISDINFEAEALITDKGVGEINNSSSVSPNNIAGVPFFGSVGPSAKLIYD GFLGSGANVASWSTQTSYTATVFNRRVIPYVDYSQILQNPKNYSYQYGAGFRVNVFYGSWLGLDYTNINSRSSNFKETQN YLSINYTLYL >Mature_250_residues MYGNFDIVSNYVPTLTRTYFMQSGGNINLSYHTQDLHLNAVLLDANPNSYFNVTNAGSKSGVGFALNSKYIYQMETAGDY QFLGLAYSNVSGFQTKNGGNVGTFDVNYGLAISDINFEAEALITDKGVGEINNSSSVSPNNIAGVPFFGSVGPSAKLIYD GFLGSGANVASWSTQTSYTATVFNRRVIPYVDYSQILQNPKNYSYQYGAGFRVNVFYGSWLGLDYTNINSRSSNFKETQN YLSINYTLYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27468; Mature: 27468
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGNFDIVSNYVPTLTRTYFMQSGGNINLSYHTQDLHLNAVLLDANPNSYFNVTNAGSKS CCCCHHHHHHCCCHHEEEEEEECCCEEEEEEEECEEEEEEEEEECCCCCEEEEECCCCCC GVGFALNSKYIYQMETAGDYQFLGLAYSNVSGFQTKNGGNVGTFDVNYGLAISDINFEAE CEEEEECCEEEEEEECCCCEEEEEEEECCCCCEEECCCCCEEEEEEECCEEEEECCCEEE ALITDKGVGEINNSSSVSPNNIAGVPFFGSVGPSAKLIYDGFLGSGANVASWSTQTSYTA EEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCEEE TVFNRRVIPYVDYSQILQNPKNYSYQYGAGFRVNVFYGSWLGLDYTNINSRSSNFKETQN EEECCEEECEECHHHHHCCCCCCCEEECCCEEEEEEEECEECEEEECCCCCCCCCHHCCC YLSINYTLYL EEEEEEEEEC >Mature Secondary Structure MYGNFDIVSNYVPTLTRTYFMQSGGNINLSYHTQDLHLNAVLLDANPNSYFNVTNAGSKS CCCCHHHHHHCCCHHEEEEEEECCCEEEEEEEECEEEEEEEEEECCCCCEEEEECCCCCC GVGFALNSKYIYQMETAGDYQFLGLAYSNVSGFQTKNGGNVGTFDVNYGLAISDINFEAE CEEEEECCEEEEEEECCCCEEEEEEEECCCCCEEECCCCCEEEEEEECCEEEEECCCEEE ALITDKGVGEINNSSSVSPNNIAGVPFFGSVGPSAKLIYDGFLGSGANVASWSTQTSYTA EEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCEEE TVFNRRVIPYVDYSQILQNPKNYSYQYGAGFRVNVFYGSWLGLDYTNINSRSSNFKETQN EEECCEEECEECHHHHHCCCCCCCEEECCCEEEEEEEECEECEEEECCCCCCCCCHHCCC YLSINYTLYL EEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA