Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is sthA [H]
Identifier: 89256309
GI number: 89256309
Start: 927498
End: 928898
Strand: Reverse
Name: sthA [H]
Synonym: FTL_0960
Alternate gene names: 89256309
Gene position: 928898-927498 (Counterclockwise)
Preceding gene: 89256310
Following gene: 89256308
Centisome position: 48.99
GC content: 34.33
Gene sequence:
>1401_bases ATGGAATATAATTACGATATTATTATTATAGGCAGTGGTCCTGGTGGTGAAGGGGCTGCGATGAAAGCAACTAGGAACGG ACAAAAAGTAGCTATCATCGAAGATGACGCTATTGGTGGTGGTTGTAATAACTGGGGAACAATTCCAAGTAAAGCTCTAA GACAGCTATCACGTGAAGTTTGGTACAACAAGAAGAATTTCGATTTCCCAGAGATGCTTGATACTGCTTATGAAATAGTT ATCAAACAAAGAGAGATTAAGAGAAATCGTTTCGCTAATAATGAAATTGATGTTTTCTATGGTTTTGCTAGTTTTATCGA CAAGCATAAAATAAAAATTTCACGTAAAAATGGTTCAACTGAAATCATTACGGCAAAAAAATTCATTCTCTCTACAGGAT CTCGTCCATATCATCCTGATGATATTGACTTTACTCATCCTAGAATTTTGGATAGTGATAAACTTCTAGAGTTGAAAGAC AAAAATATCAAATCAATTACTATTTATGGTGCTGGTGTAATTGGTTGTGAATATGCATCCATACTTGGAACACTAGATAT TCAGGTAAATCTTATCAACACTAGAAATAAACTAATGTCGTTCCTTGATGATGAAATTATCGAAACGCTAACAAATCACT TTACAATTAATCAAAGAATTAATCTAATACATAATGAAACTTATAAAAGTATCAAAGCAAGAGGAGATAAAGTAGTTACT ACTCTTAACTCAGGTAGAATTATCGAATCTGATTATGTCTTGTTTGCGCTTGGCCGATCAGGTAATACAAATGGCCTTAA TTTAGATAAAATTGGAGTTGAGTATGACCCACAAAGAGGTCTTGTTAAGGTTAATGACAATTATCAAACTACTCAAGAGA ATATCTATGCTGTTGGTGATGTTATAGGTTTTCCTTCACTTGCATCATCTGCTTTTAACCAAGGTAGATTTGCAGCTACG CATATTATAGATGGCTCTTGTAATGACAAATTAGTCGAGGATATCCCAACAGGGATTTATACCCGCCCTGAGATTAGTTG TATTGGAAAAACAGAAGAGCAATTAACTGCTGAGAATATTCCATATGAAGTTGGTAGAGCATATTTTAAAGATTTAGCTC GTGCACAAATTTCAGGAAGTGAAACAGGGATGTTAAAGATACTTTTCCATAAAGAAACTCTAGAGATCCTTGGCATTCAC TGTTTTGGTCATAGGGTATCTGAGATTATCCATATTGGTCAAGCTATCAAATCAATGCCAGGCAAACACAATACTATCAG ATACTTTTTGAACACTACATTTAACTACCCTACTATGGCTGAGGCTTATCGTATTGCTGGTATTGACGGTCTTAATAAGC TTAAACCTAAAAATAAACAATTTGTCCCAGAATACCAATAA
Upstream 100 bases:
>100_bases AATAATTTAACTAAAACTAATCAATATAAGCTTATACTATGTTATTATTTTGACAATGTGTTTGCTGATTTTTTAAGAAA ATAGAGTGTGGAGTAAAACC
Downstream 100 bases:
>100_bases TCCATGTACTACGATATCTATATAATTTACTTGTTTATATTTCTATTTGGTGCTGCTATTGGCAGTTTTTTGAATGTTGT TATATATCGAGTGCCAAATA
Product: soluble pyridine nucleotide transhydrogenase
Products: NA
Alternate protein names: STH; NAD(P)(+) transhydrogenase [B-specific] [H]
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MEYNYDIIIIGSGPGGEGAAMKATRNGQKVAIIEDDAIGGGCNNWGTIPSKALRQLSREVWYNKKNFDFPEMLDTAYEIV IKQREIKRNRFANNEIDVFYGFASFIDKHKIKISRKNGSTEIITAKKFILSTGSRPYHPDDIDFTHPRILDSDKLLELKD KNIKSITIYGAGVIGCEYASILGTLDIQVNLINTRNKLMSFLDDEIIETLTNHFTINQRINLIHNETYKSIKARGDKVVT TLNSGRIIESDYVLFALGRSGNTNGLNLDKIGVEYDPQRGLVKVNDNYQTTQENIYAVGDVIGFPSLASSAFNQGRFAAT HIIDGSCNDKLVEDIPTGIYTRPEISCIGKTEEQLTAENIPYEVGRAYFKDLARAQISGSETGMLKILFHKETLEILGIH CFGHRVSEIIHIGQAIKSMPGKHNTIRYFLNTTFNYPTMAEAYRIAGIDGLNKLKPKNKQFVPEYQ
Sequences:
>Translated_466_residues MEYNYDIIIIGSGPGGEGAAMKATRNGQKVAIIEDDAIGGGCNNWGTIPSKALRQLSREVWYNKKNFDFPEMLDTAYEIV IKQREIKRNRFANNEIDVFYGFASFIDKHKIKISRKNGSTEIITAKKFILSTGSRPYHPDDIDFTHPRILDSDKLLELKD KNIKSITIYGAGVIGCEYASILGTLDIQVNLINTRNKLMSFLDDEIIETLTNHFTINQRINLIHNETYKSIKARGDKVVT TLNSGRIIESDYVLFALGRSGNTNGLNLDKIGVEYDPQRGLVKVNDNYQTTQENIYAVGDVIGFPSLASSAFNQGRFAAT HIIDGSCNDKLVEDIPTGIYTRPEISCIGKTEEQLTAENIPYEVGRAYFKDLARAQISGSETGMLKILFHKETLEILGIH CFGHRVSEIIHIGQAIKSMPGKHNTIRYFLNTTFNYPTMAEAYRIAGIDGLNKLKPKNKQFVPEYQ >Mature_466_residues MEYNYDIIIIGSGPGGEGAAMKATRNGQKVAIIEDDAIGGGCNNWGTIPSKALRQLSREVWYNKKNFDFPEMLDTAYEIV IKQREIKRNRFANNEIDVFYGFASFIDKHKIKISRKNGSTEIITAKKFILSTGSRPYHPDDIDFTHPRILDSDKLLELKD KNIKSITIYGAGVIGCEYASILGTLDIQVNLINTRNKLMSFLDDEIIETLTNHFTINQRINLIHNETYKSIKARGDKVVT TLNSGRIIESDYVLFALGRSGNTNGLNLDKIGVEYDPQRGLVKVNDNYQTTQENIYAVGDVIGFPSLASSAFNQGRFAAT HIIDGSCNDKLVEDIPTGIYTRPEISCIGKTEEQLTAENIPYEVGRAYFKDLARAQISGSETGMLKILFHKETLEILGIH CFGHRVSEIIHIGQAIKSMPGKHNTIRYFLNTTFNYPTMAEAYRIAGIDGLNKLKPKNKQFVPEYQ
Specific function: Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=468, Percent_Identity=29.9145299145299, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI50301238, Length=466, Percent_Identity=27.2532188841202, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI22035672, Length=428, Percent_Identity=25.2336448598131, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI33519430, Length=448, Percent_Identity=27.9017857142857, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI33519428, Length=448, Percent_Identity=27.9017857142857, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI33519426, Length=448, Percent_Identity=27.9017857142857, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI148277065, Length=482, Percent_Identity=27.5933609958506, Blast_Score=112, Evalue=9e-25, Organism=Homo sapiens, GI148277071, Length=448, Percent_Identity=27.9017857142857, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI291045266, Length=482, Percent_Identity=26.5560165975104, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI291045268, Length=356, Percent_Identity=27.5280898876405, Blast_Score=96, Evalue=9e-20, Organism=Escherichia coli, GI87082354, Length=464, Percent_Identity=53.448275862069, Blast_Score=506, Evalue=1e-145, Organism=Escherichia coli, GI1786307, Length=462, Percent_Identity=28.7878787878788, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI1789915, Length=461, Percent_Identity=29.2841648590022, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI87081717, Length=443, Percent_Identity=26.410835214447, Blast_Score=119, Evalue=6e-28, Organism=Caenorhabditis elegans, GI32565766, Length=463, Percent_Identity=28.2937365010799, Blast_Score=185, Evalue=6e-47, Organism=Caenorhabditis elegans, GI17557007, Length=462, Percent_Identity=26.1904761904762, Blast_Score=123, Evalue=3e-28, Organism=Caenorhabditis elegans, GI71982272, Length=389, Percent_Identity=27.2493573264781, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71983429, Length=347, Percent_Identity=25.6484149855908, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71983419, Length=347, Percent_Identity=25.6484149855908, Blast_Score=97, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6321091, Length=483, Percent_Identity=29.6066252587992, Blast_Score=156, Evalue=8e-39, Organism=Saccharomyces cerevisiae, GI6325240, Length=483, Percent_Identity=26.7080745341615, Blast_Score=140, Evalue=6e-34, Organism=Saccharomyces cerevisiae, GI6325166, Length=472, Percent_Identity=26.4830508474576, Blast_Score=130, Evalue=3e-31, Organism=Drosophila melanogaster, GI21358499, Length=475, Percent_Identity=29.6842105263158, Blast_Score=187, Evalue=9e-48, Organism=Drosophila melanogaster, GI24640549, Length=490, Percent_Identity=27.3469387755102, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI24640553, Length=490, Percent_Identity=27.3469387755102, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI24640551, Length=491, Percent_Identity=27.4949083503055, Blast_Score=139, Evalue=6e-33, Organism=Drosophila melanogaster, GI17737741, Length=492, Percent_Identity=25.4065040650407, Blast_Score=118, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 - InterPro: IPR022962 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.6.1.1 [H]
Molecular weight: Translated: 52299; Mature: 52299
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYNYDIIIIGSGPGGEGAAMKATRNGQKVAIIEDDAIGGGCNNWGTIPSKALRQLSREV CCCCEEEEEEECCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH WYNKKNFDFPEMLDTAYEIVIKQREIKRNRFANNEIDVFYGFASFIDKHKIKISRKNGST CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCEEEEEECCCCE EIITAKKFILSTGSRPYHPDDIDFTHPRILDSDKLLELKDKNIKSITIYGAGVIGCEYAS EEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCEEHHHHHH ILGTLDIQVNLINTRNKLMSFLDDEIIETLTNHFTINQRINLIHNETYKSIKARGDKVVT HHEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCEEECCEEEEEEHHHHHHHHHCCCEEEE TLNSGRIIESDYVLFALGRSGNTNGLNLDKIGVEYDPQRGLVKVNDNYQTTQENIYAVGD EECCCEEEECCEEEEEECCCCCCCCEEEEEECCEECCCCCEEEECCCCCCCCCCEEEEHH VIGFPSLASSAFNQGRFAATHIIDGSCNDKLVEDIPTGIYTRPEISCIGKTEEQLTAENI HHCCCHHHHHHHCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCEEECCCCHHHHHHCCC PYEVGRAYFKDLARAQISGSETGMLKILFHKETLEILGIHCFGHRVSEIIHIGQAIKSMP CHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEHEEEHHHHHHHHHHHHHHHHHHHCC GKHNTIRYFLNTTFNYPTMAEAYRIAGIDGLNKLKPKNKQFVPEYQ CCCCEEEEEEECCCCCCCHHHHHEECCCCCCHHCCCCCCCCCCCCC >Mature Secondary Structure MEYNYDIIIIGSGPGGEGAAMKATRNGQKVAIIEDDAIGGGCNNWGTIPSKALRQLSREV CCCCEEEEEEECCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH WYNKKNFDFPEMLDTAYEIVIKQREIKRNRFANNEIDVFYGFASFIDKHKIKISRKNGST CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCEEEEEECCCCE EIITAKKFILSTGSRPYHPDDIDFTHPRILDSDKLLELKDKNIKSITIYGAGVIGCEYAS EEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCEEHHHHHH ILGTLDIQVNLINTRNKLMSFLDDEIIETLTNHFTINQRINLIHNETYKSIKARGDKVVT HHEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCEEECCEEEEEEHHHHHHHHHCCCEEEE TLNSGRIIESDYVLFALGRSGNTNGLNLDKIGVEYDPQRGLVKVNDNYQTTQENIYAVGD EECCCEEEECCEEEEEECCCCCCCCEEEEEECCEECCCCCEEEECCCCCCCCCCEEEEHH VIGFPSLASSAFNQGRFAATHIIDGSCNDKLVEDIPTGIYTRPEISCIGKTEEQLTAENI HHCCCHHHHHHHCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCEEECCCCHHHHHHCCC PYEVGRAYFKDLARAQISGSETGMLKILFHKETLEILGIHCFGHRVSEIIHIGQAIKSMP CHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEHEEEHHHHHHHHHHHHHHHHHHHCC GKHNTIRYFLNTTFNYPTMAEAYRIAGIDGLNKLKPKNKQFVPEYQ CCCCEEEEEEECCCCCCCHHHHHEECCCCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA