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The map label for this gene is yfjD [H]

Identifier: 89256300

GI number: 89256300

Start: 920075

End: 921334

Strand: Direct

Name: yfjD [H]

Synonym: FTL_0951

Alternate gene names: 89256300

Gene position: 920075-921334 (Clockwise)

Preceding gene: 89256299

Following gene: 89256315

Centisome position: 48.53

GC content: 30.56

Gene sequence:

>1260_bases
ATGAGTACTTATACTGTAGTTATTATCATATTTATACTTATTTGTATATCTGCTTTTTTCTCAAGCTCTGAGACAGCGAT
GATGGCATTAAATAAATATAAACTTAAACATTTAGCCAAAAAAAATCATCGTGCCGCAAAGAGAAGCTTATCTTTAGTAC
GCAACCCAGAGAGATTACTAGTTGCTATTCTTATTGGTAATACTTTTGCAAATATCTTTGCTGGAACTGTGATTTCCTCA
TACTCTGAGGATCATTTCGGTGATTTAGGATTGCTTATTGCAACTATAGTTGTAACTATATTGGTTTTGGTTTTTGGTGA
GATAATTCCTAAATCTTTCGCAGCTATTTACCCACAAAGGTTAGCCTTTCCTTTTTCTTTGCCATTAAAAATAATCATGC
TAATTTTATATCCAGCGGTGATATTTTTAAGTATGGTTTCAAAAGTAACATTAAAACTTTTTGGTGTCAAAATAGAAGCT
GTTAATAATGAGTCTTTGGATAAAGAAGAAATCCAAACTGTTGTTAATGAGTCAAATGCAAAGCTTGGAGCTAAAAATAA
AAATATGCTCTTGGGAGTTTTAGAGTTAGATAAAGTTTTAGTACAAGAAGTAATGACCCATTTTAATAAGATTGAATATA
TTGATTTAAGTAATTCAATCGATAAAATTTTAGCTAGAATTGCAAAGATGAGATCATTAAATATTATTCTCTGTGAGAAT
GGCGTAAATAATATTATTGGGGTAATTAGGTTAAAAGAGATAACTAACTTATTAATTTCTTCAAAAAAAGGTCAGATAAG
CAAAGCAGCGTTACGCAAGATCGCCCAAGAAGCATATTTTATTCCTGAAACAGTCTCGTTACAAACACAACTTATAAATT
TTCAACAAAAAAGTAAGCGCTTTGCAATCGTTGTTGATGAGTATGGTAATGTATGTGGAACGGTGACAATCGAAGATATT
ATGGAAGAGATAGTCGGCGAATTCTCTGATAGATTTGATGTCAATAACAATATCCGTAAACTTGAAGATAATAGTTATCT
GATAGGAGGTAGTGCTACTTTAAGAGAGATTAATCGCCATATAGGTATAGAATTTGAAAGTGAAGATGCTAAGACATTGT
CTGGTCTTATAATTGAGGAAATAGAGAATCTACCATCGGGACCTTGTTGTATAAAATACAATAATATTCTATTAGAAATA
ACAAATATTAGGGATAATAAAATAGTTTCTATAAAGTTAACTATTACTACAGAAACTTAG

Upstream 100 bases:

>100_bases
TATAACTATTTCATCTTTATATTTATTTCCATAATATATTTTTCTATTAAAAAATTCTTGTGTTAAACTAGTAAATTAGT
TATAACGATACACTAATTAA

Downstream 100 bases:

>100_bases
TGATTGTGATTTTAATATTGAATTAATCTAGATATAATGTGACACTGCTATTGTATGAGAGTAAGTTACTTGTTTTGATA
AGAGTGAAAAAACAAAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSTYTVVIIIFILICISAFFSSSETAMMALNKYKLKHLAKKNHRAAKRSLSLVRNPERLLVAILIGNTFANIFAGTVISS
YSEDHFGDLGLLIATIVVTILVLVFGEIIPKSFAAIYPQRLAFPFSLPLKIIMLILYPAVIFLSMVSKVTLKLFGVKIEA
VNNESLDKEEIQTVVNESNAKLGAKNKNMLLGVLELDKVLVQEVMTHFNKIEYIDLSNSIDKILARIAKMRSLNIILCEN
GVNNIIGVIRLKEITNLLISSKKGQISKAALRKIAQEAYFIPETVSLQTQLINFQQKSKRFAIVVDEYGNVCGTVTIEDI
MEEIVGEFSDRFDVNNNIRKLEDNSYLIGGSATLREINRHIGIEFESEDAKTLSGLIIEEIENLPSGPCCIKYNNILLEI
TNIRDNKIVSIKLTITTET

Sequences:

>Translated_419_residues
MSTYTVVIIIFILICISAFFSSSETAMMALNKYKLKHLAKKNHRAAKRSLSLVRNPERLLVAILIGNTFANIFAGTVISS
YSEDHFGDLGLLIATIVVTILVLVFGEIIPKSFAAIYPQRLAFPFSLPLKIIMLILYPAVIFLSMVSKVTLKLFGVKIEA
VNNESLDKEEIQTVVNESNAKLGAKNKNMLLGVLELDKVLVQEVMTHFNKIEYIDLSNSIDKILARIAKMRSLNIILCEN
GVNNIIGVIRLKEITNLLISSKKGQISKAALRKIAQEAYFIPETVSLQTQLINFQQKSKRFAIVVDEYGNVCGTVTIEDI
MEEIVGEFSDRFDVNNNIRKLEDNSYLIGGSATLREINRHIGIEFESEDAKTLSGLIIEEIENLPSGPCCIKYNNILLEI
TNIRDNKIVSIKLTITTET
>Mature_418_residues
STYTVVIIIFILICISAFFSSSETAMMALNKYKLKHLAKKNHRAAKRSLSLVRNPERLLVAILIGNTFANIFAGTVISSY
SEDHFGDLGLLIATIVVTILVLVFGEIIPKSFAAIYPQRLAFPFSLPLKIIMLILYPAVIFLSMVSKVTLKLFGVKIEAV
NNESLDKEEIQTVVNESNAKLGAKNKNMLLGVLELDKVLVQEVMTHFNKIEYIDLSNSIDKILARIAKMRSLNIILCENG
VNNIIGVIRLKEITNLLISSKKGQISKAALRKIAQEAYFIPETVSLQTQLINFQQKSKRFAIVVDEYGNVCGTVTIEDIM
EEIVGEFSDRFDVNNNIRKLEDNSYLIGGSATLREINRHIGIEFESEDAKTLSGLIIEEIENLPSGPCCIKYNNILLEIT
NIRDNKIVSIKLTITTET

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=390, Percent_Identity=26.4102564102564, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI40068053, Length=350, Percent_Identity=25.4285714285714, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI40068055, Length=350, Percent_Identity=25.4285714285714, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI94681046, Length=341, Percent_Identity=25.5131964809384, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI145693175, Length=398, Percent_Identity=36.4321608040201, Blast_Score=299, Evalue=2e-82,
Organism=Escherichia coli, GI1790664, Length=426, Percent_Identity=23.7089201877934, Blast_Score=134, Evalue=8e-33,
Organism=Escherichia coli, GI87082033, Length=323, Percent_Identity=23.8390092879257, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1786879, Length=262, Percent_Identity=21.7557251908397, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1788119, Length=321, Percent_Identity=24.6105919003115, Blast_Score=75, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI71980512, Length=365, Percent_Identity=25.4794520547945, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 46806; Mature: 46675

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTYTVVIIIFILICISAFFSSSETAMMALNKYKLKHLAKKNHRAAKRSLSLVRNPERLL
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHE
VAILIGNTFANIFAGTVISSYSEDHFGDLGLLIATIVVTILVLVFGEIIPKSFAAIYPQR
EEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LAFPFSLPLKIIMLILYPAVIFLSMVSKVTLKLFGVKIEAVNNESLDKEEIQTVVNESNA
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHCCCC
KLGAKNKNMLLGVLELDKVLVQEVMTHFNKIEYIDLSNSIDKILARIAKMRSLNIILCEN
CCCCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECC
GVNNIIGVIRLKEITNLLISSKKGQISKAALRKIAQEAYFIPETVSLQTQLINFQQKSKR
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCE
FAIVVDEYGNVCGTVTIEDIMEEIVGEFSDRFDVNNNIRKLEDNSYLIGGSATLREINRH
EEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCHHHHHHHHH
IGIEFESEDAKTLSGLIIEEIENLPSGPCCIKYNNILLEITNIRDNKIVSIKLTITTET
HCCEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEEECCCCEEEEEEEEEEECC
>Mature Secondary Structure 
STYTVVIIIFILICISAFFSSSETAMMALNKYKLKHLAKKNHRAAKRSLSLVRNPERLL
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHE
VAILIGNTFANIFAGTVISSYSEDHFGDLGLLIATIVVTILVLVFGEIIPKSFAAIYPQR
EEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LAFPFSLPLKIIMLILYPAVIFLSMVSKVTLKLFGVKIEAVNNESLDKEEIQTVVNESNA
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHCCCC
KLGAKNKNMLLGVLELDKVLVQEVMTHFNKIEYIDLSNSIDKILARIAKMRSLNIILCEN
CCCCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECC
GVNNIIGVIRLKEITNLLISSKKGQISKAALRKIAQEAYFIPETVSLQTQLINFQQKSKR
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCE
FAIVVDEYGNVCGTVTIEDIMEEIVGEFSDRFDVNNNIRKLEDNSYLIGGSATLREINRH
EEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCHHHHHHHHH
IGIEFESEDAKTLSGLIIEEIENLPSGPCCIKYNNILLEITNIRDNKIVSIKLTITTET
HCCEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEEECCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]