Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256297
Identifier: 89256297
GI number: 89256297
Start: 917404
End: 918330
Strand: Reverse
Name: 89256297
Synonym: FTL_0948
Alternate gene names: NA
Gene position: 918330-917404 (Counterclockwise)
Preceding gene: 89256301
Following gene: 89256295
Centisome position: 48.44
GC content: 34.09
Gene sequence:
>927_bases TTGTGCTCCAATGTATCTGCCAATAAAGATTCTAATGGTGTTAATGAGGGTCCATGTATATTAATTTTTGGTATGGTTAA TGGTGATGAATTTAACAGTATCGAAATTATCAACTCTCTTTTAGAAAAAACCAATCTTAAACAGTTAAATGGTACAATCG TAGCTATTCCGGTACTAAATGTTTTTGGTTTAGTCCATAGTATCAAGCATAACCCTACCCTAGAACAAGCTTTTCCAGGG GATGAGAATGGCTCATATATGCACCGTTATGCTTATAGAATAACCCAAGAGATTATAAAAAAAGCAAACTATTCTATCCA AATTAAAACAGGAGCTATAAATCACGAGATACTTCCACAAGTATACTTCAATGGTGAAGATGAAGAGTCTATAAAAATGG CCAGAGCTTTTCAAGCACCTGTAATTACCGCGGTAAATATGAATCAATCTAGTATTCGAAAAATTCATCAAGACCTAAAT ATCCCTTTTATCTGCTATGAAGCTGGTGAGGCAAATAAATTTGGTGAAGAAGCTATCAATGTTGGTATAGCAGGTATACA AAATGTTATGCTTAAAATAGCTCTGCTCGAAGACCAAGAATTCATCCAACAACTCAAACCATTAGTATCAGAAGATACTG AATGGACAGTCTCTGACAAACCAGGGATACTCAGAACAGAAATAGAGCTTGGCACAAGGGTCAAAGAAGGTCAAAAAATA GGTAAGCTAATAGATCCATTTGGGAATGATGAAAGCATTTATCTAAAGTCACCTATTGATGGAATCATACTTGGCATAAA TAATTACCCAATGATTAAGGAAGGCGATCTAGTATTTAAAATTTCATCTTTCCAAAATGATGAGAAAGCAGAGGCAAAAA TAGAAGATTGGGAAGAAATAACAAAAGAAAACTTTAGTGATGAATAA
Upstream 100 bases:
>100_bases TAAATCTAATATAAAAACTTATGAAATTTAAAATTTTTGATAATACCTTTCAGCCTGGAGAAATGGCTACATTAGCAATG CCATTACCTAGCCAATATTC
Downstream 100 bases:
>100_bases TAAATTATCTTTTTTAGCCATAACAATATGGTTAACATGTGCTATATTTTTTATGTATGAGTTCCTACTTCGAACAATAT TAGGAACATTTGAACATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Deacylase; Succinylglutamate Desuccinylase / Aspartoacylase Family; Deacylase-Like; Ectoine Utilization Protein EutE; Succinylglutamate Desuccinylase; Succinate Dehydrogenase Subunit; Serine Protease; Succinate Dehydrogenase Subunit Sdh; Aminoacylase-2/Carboxypeptidase-Z Family Hydrolase
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MCSNVSANKDSNGVNEGPCILIFGMVNGDEFNSIEIINSLLEKTNLKQLNGTIVAIPVLNVFGLVHSIKHNPTLEQAFPG DENGSYMHRYAYRITQEIIKKANYSIQIKTGAINHEILPQVYFNGEDEESIKMARAFQAPVITAVNMNQSSIRKIHQDLN IPFICYEAGEANKFGEEAINVGIAGIQNVMLKIALLEDQEFIQQLKPLVSEDTEWTVSDKPGILRTEIELGTRVKEGQKI GKLIDPFGNDESIYLKSPIDGIILGINNYPMIKEGDLVFKISSFQNDEKAEAKIEDWEEITKENFSDE
Sequences:
>Translated_308_residues MCSNVSANKDSNGVNEGPCILIFGMVNGDEFNSIEIINSLLEKTNLKQLNGTIVAIPVLNVFGLVHSIKHNPTLEQAFPG DENGSYMHRYAYRITQEIIKKANYSIQIKTGAINHEILPQVYFNGEDEESIKMARAFQAPVITAVNMNQSSIRKIHQDLN IPFICYEAGEANKFGEEAINVGIAGIQNVMLKIALLEDQEFIQQLKPLVSEDTEWTVSDKPGILRTEIELGTRVKEGQKI GKLIDPFGNDESIYLKSPIDGIILGINNYPMIKEGDLVFKISSFQNDEKAEAKIEDWEEITKENFSDE >Mature_308_residues MCSNVSANKDSNGVNEGPCILIFGMVNGDEFNSIEIINSLLEKTNLKQLNGTIVAIPVLNVFGLVHSIKHNPTLEQAFPG DENGSYMHRYAYRITQEIIKKANYSIQIKTGAINHEILPQVYFNGEDEESIKMARAFQAPVITAVNMNQSSIRKIHQDLN IPFICYEAGEANKFGEEAINVGIAGIQNVMLKIALLEDQEFIQQLKPLVSEDTEWTVSDKPGILRTEIELGTRVKEGQKI GKLIDPFGNDESIYLKSPIDGIILGINNYPMIKEGDLVFKISSFQNDEKAEAKIEDWEEITKENFSDE
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34454; Mature: 34454
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSNVSANKDSNGVNEGPCILIFGMVNGDEFNSIEIINSLLEKTNLKQLNGTIVAIPVLN CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHCCCEEEEHHHH VFGLVHSIKHNPTLEQAFPGDENGSYMHRYAYRITQEIIKKANYSIQIKTGAINHEILPQ HHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCE VYFNGEDEESIKMARAFQAPVITAVNMNQSSIRKIHQDLNIPFICYEAGEANKFGEEAIN EEECCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH VGIAGIQNVMLKIALLEDQEFIQQLKPLVSEDTEWTVSDKPGILRTEIELGTRVKEGQKI HHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCCCEEECCCCCEEEEEHHHCCCHHHHHHH GKLIDPFGNDESIYLKSPIDGIILGINNYPMIKEGDLVFKISSFQNDEKAEAKIEDWEEI HHHHCCCCCCCEEEEECCCCEEEECCCCCCCEECCCEEEEECCCCCCCHHHHHHHHHHHH TKENFSDE HHHCCCCC >Mature Secondary Structure MCSNVSANKDSNGVNEGPCILIFGMVNGDEFNSIEIINSLLEKTNLKQLNGTIVAIPVLN CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHCCCEEEEHHHH VFGLVHSIKHNPTLEQAFPGDENGSYMHRYAYRITQEIIKKANYSIQIKTGAINHEILPQ HHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCE VYFNGEDEESIKMARAFQAPVITAVNMNQSSIRKIHQDLNIPFICYEAGEANKFGEEAIN EEECCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH VGIAGIQNVMLKIALLEDQEFIQQLKPLVSEDTEWTVSDKPGILRTEIELGTRVKEGQKI HHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCCCEEECCCCCEEEEEHHHCCCHHHHHHH GKLIDPFGNDESIYLKSPIDGIILGINNYPMIKEGDLVFKISSFQNDEKAEAKIEDWEEI HHHHCCCCCCCEEEEECCCCEEEECCCCCCCEECCCEEEEECCCCCCCHHHHHHHHHHHH TKENFSDE HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA