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The map label for this gene is elbB [H]

Identifier: 89256279

GI number: 89256279

Start: 900844

End: 901503

Strand: Direct

Name: elbB [H]

Synonym: FTL_0928

Alternate gene names: 89256279

Gene position: 900844-901503 (Clockwise)

Preceding gene: 89256278

Following gene: 89256280

Centisome position: 47.51

GC content: 36.36

Gene sequence:

>660_bases
ATGGCAAAAGTAGCGGTAGTATTATCTGGATGTGGTTATCTCGATGGTTCAGAAATACACGAAACTGTATTGACAATATT
AGCATTAGAGAAACAAGGAGTAGAGTGGCAAGGTGTTGCGCTAAATAGAGATCAAAAGCAGGTGATTAATCATTTGCACC
AATCTGTAGATAGCAAAGCATCACCGCGTAATATTCTTGAAGAATCAGCACGCATTACTAGAGGTAATGTCATTGATATA
GCTGATGCAGATAGTGATGATTATGATGCGATAATCTTTCCAGGTGGTTTTGGAGCAGCTAAAAATATTATGGATTTTGC
TTTTGTTGGCGATGATAGTTATCAAATGGATGAAGAAGTTCTAAAATTTGCTCGAGCTTTTTATTTAGCTGATAAACCCG
CTGGTTATATATGTATAGCACCGTTGATGATACCGTTGGTATATCCAGAGGGCACAAAAGCTACTGTTGGTACAGATGAA
AATACCACAGCTATATTAGCAAAAAAAGGTGCTGAAGCTATAATTATGGATGCTACAGATATTTGTGTTGATGAGAGTGT
CAAAATCGTATCAACACCAGCATATATGTGTGCAAGAAATATCTTAGAGGCAGCTCAAGGGATTGAAAAATTAGTAGAAA
AAGTAGTTAGTTATATTTAG

Upstream 100 bases:

>100_bases
CATCAGGGCCTATGGTAAGATCAAGCTATAGAGCTGATAGAGTTTTCAAAAGGAATAATTTAGATTTGTAAAATCAAAAA
ATATGTAAAGGTGAATAAAA

Downstream 100 bases:

>100_bases
ACAAAAGGTGTAAAAATGGCAGGTCATAGTAAATGGGCTAATATTAAGCATAAAAAAGCAAAAGAAGATGCAAAACGTGG
CAAAATCTTCACAAAGCTAA

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MAKVAVVLSGCGYLDGSEIHETVLTILALEKQGVEWQGVALNRDQKQVINHLHQSVDSKASPRNILEESARITRGNVIDI
ADADSDDYDAIIFPGGFGAAKNIMDFAFVGDDSYQMDEEVLKFARAFYLADKPAGYICIAPLMIPLVYPEGTKATVGTDE
NTTAILAKKGAEAIIMDATDICVDESVKIVSTPAYMCARNILEAAQGIEKLVEKVVSYI

Sequences:

>Translated_219_residues
MAKVAVVLSGCGYLDGSEIHETVLTILALEKQGVEWQGVALNRDQKQVINHLHQSVDSKASPRNILEESARITRGNVIDI
ADADSDDYDAIIFPGGFGAAKNIMDFAFVGDDSYQMDEEVLKFARAFYLADKPAGYICIAPLMIPLVYPEGTKATVGTDE
NTTAILAKKGAEAIIMDATDICVDESVKIVSTPAYMCARNILEAAQGIEKLVEKVVSYI
>Mature_218_residues
AKVAVVLSGCGYLDGSEIHETVLTILALEKQGVEWQGVALNRDQKQVINHLHQSVDSKASPRNILEESARITRGNVIDIA
DADSDDYDAIIFPGGFGAAKNIMDFAFVGDDSYQMDEEVLKFARAFYLADKPAGYICIAPLMIPLVYPEGTKATVGTDEN
TTAILAKKGAEAIIMDATDICVDESVKIVSTPAYMCARNILEAAQGIEKLVEKVVSYI

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=224, Percent_Identity=38.8392857142857, Blast_Score=150, Evalue=6e-37,
Organism=Homo sapiens, GI296531408, Length=224, Percent_Identity=33.9285714285714, Blast_Score=119, Evalue=3e-27,
Organism=Escherichia coli, GI87082228, Length=216, Percent_Identity=48.1481481481481, Blast_Score=200, Evalue=6e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 23692; Mature: 23561

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVAVVLSGCGYLDGSEIHETVLTILALEKQGVEWQGVALNRDQKQVINHLHQSVDSKA
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCC
SPRNILEESARITRGNVIDIADADSDDYDAIIFPGGFGAAKNIMDFAFVGDDSYQMDEEV
CHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHEEEEECCCCCHHHHHH
LKFARAFYLADKPAGYICIAPLMIPLVYPEGTKATVGTDENTTAILAKKGAEAIIMDATD
HHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCCCEEECCCCCCEEEEEECCCCEEEEECHH
ICVDESVKIVSTPAYMCARNILEAAQGIEKLVEKVVSYI
HHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
AKVAVVLSGCGYLDGSEIHETVLTILALEKQGVEWQGVALNRDQKQVINHLHQSVDSKA
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCC
SPRNILEESARITRGNVIDIADADSDDYDAIIFPGGFGAAKNIMDFAFVGDDSYQMDEEV
CHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHEEEEECCCCCHHHHHH
LKFARAFYLADKPAGYICIAPLMIPLVYPEGTKATVGTDENTTAILAKKGAEAIIMDATD
HHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCCCEEECCCCCCEEEEEECCCCEEEEECHH
ICVDESVKIVSTPAYMCARNILEAAQGIEKLVEKVVSYI
HHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]