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The map label for this gene is dtpA [H]

Identifier: 89256276

GI number: 89256276

Start: 897902

End: 899122

Strand: Direct

Name: dtpA [H]

Synonym: FTL_0925

Alternate gene names: 89256276

Gene position: 897902-899122 (Clockwise)

Preceding gene: 89256275

Following gene: 89256278

Centisome position: 47.36

GC content: 28.5

Gene sequence:

>1221_bases
TTGGGGAAGTTTACTATTAGCTTTTGCATATTTAGCTGTATTTTTAAGTGGCTTTATGGTCCATTTAGTGATGAGTTTTT
TATTTTTGCATTTGCTTTAGTTCCTGTATGCGGATCTTTACAGCTAGGAACAGCATCTGCAATGGTATCAAAAATATATA
GCGATAATCCAGTACATGCAAAAAGTGGTATGACAATGTTTTATATATCTATTAATTTGGGTAGCTTACTAGCCTATTTA
GTAGCTCCTTCATTAATTGGATATCAATTTGGTGCTTTAGCAGTGTTAAGTGTAGTTTTTATTGGTAAATTATTAGCAAT
AATAAATTTTTCGTATAGATATAAGATTTATGAAAACGTTGTTGATGAAATTGATAAAAAGCCAATGACAAGTATAGCTA
AGAAAGTTGTTTTAGGATATCTAGCTATAGTATATGTTTTTATAGTAATTTGTTATCACTATCCAGACTATGCAAATGTA
GTTGTGGCAGTTATTAGTATGTTTTGTTTGCTATTATTTTTATTAAGAACAATATTTTTCTTAAAAGATGATGTACGTAT
TAAGCAAATAGTTGGTTTGATATTAATAGTCGTAGCTGTAGTATTTTTTGTTATTTACAATCAAATGGAATCTACTCTTG
TCATGGCAGCAAAGAATAATTCAGATCTTTTAATGTTTGGTTTTAAAGTTAATGCTGCGAGCTATCAGATAGTTAACCCA
ATTTTGATAATATTTGGTGGTATGCTTTTAATAAGGATATATCCAATGTTTCCGAGATTTTATATACCATATCAATTTGC
TGTAGGAGTATTATTAGCAGCTGCAGGTTTATTCATAATGTATTATGGCTTCTCTATAGACAACAATGGTATTGTAAGTG
GTAATTACATTACATTATCTTATGTCCTAATTTCTATTTCAGAATTATTTGTAAGTGCTATTGGACTTAGTATGATCGGC
ATATACTGTGATAGTAAAACTATTGGTTTTGCAATGGAAGCATGGTATATATCCTCTTCTATGGCAAATTCTATAACAGG
TCTATTAAATCAAGTGGTTGCTCTTCCTAAAGATGGATTTAGTGCTTTAGAAAGCGCTAATATGTATAAAACTTATTTCT
TTGATACTAGTTTAAGTGTTATGTTAATTGGAATTTTAGTACTAATTTTAGCATACTTCTTAATAAAATTTATGAAAATA
AGAAATATAGATTTTGTATAA

Upstream 100 bases:

>100_bases
CTTATTCATTTCAAGGTATTTACAAAGCAATGAATTACGCAATTATTATGTTCGGTGGATATATTGCTGATAGATATTTA
GGTTTAAGAAGATCTATATT

Downstream 100 bases:

>100_bases
AATTATAAACTAGGAGCATTAAAGTTTCTTTTGGCAGCTTCTTGATCTAGTAGATATAAACCACTATCTTTGACAAGTTT
GATTTTATTAATCATATCGC

Product: proton-dependent oligopeptide transport (POT) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MGKFTISFCIFSCIFKWLYGPFSDEFFIFAFALVPVCGSLQLGTASAMVSKIYSDNPVHAKSGMTMFYISINLGSLLAYL
VAPSLIGYQFGALAVLSVVFIGKLLAIINFSYRYKIYENVVDEIDKKPMTSIAKKVVLGYLAIVYVFIVICYHYPDYANV
VVAVISMFCLLLFLLRTIFFLKDDVRIKQIVGLILIVVAVVFFVIYNQMESTLVMAAKNNSDLLMFGFKVNAASYQIVNP
ILIIFGGMLLIRIYPMFPRFYIPYQFAVGVLLAAAGLFIMYYGFSIDNNGIVSGNYITLSYVLISISELFVSAIGLSMIG
IYCDSKTIGFAMEAWYISSSMANSITGLLNQVVALPKDGFSALESANMYKTYFFDTSLSVMLIGILVLILAYFLIKFMKI
RNIDFV

Sequences:

>Translated_406_residues
MGKFTISFCIFSCIFKWLYGPFSDEFFIFAFALVPVCGSLQLGTASAMVSKIYSDNPVHAKSGMTMFYISINLGSLLAYL
VAPSLIGYQFGALAVLSVVFIGKLLAIINFSYRYKIYENVVDEIDKKPMTSIAKKVVLGYLAIVYVFIVICYHYPDYANV
VVAVISMFCLLLFLLRTIFFLKDDVRIKQIVGLILIVVAVVFFVIYNQMESTLVMAAKNNSDLLMFGFKVNAASYQIVNP
ILIIFGGMLLIRIYPMFPRFYIPYQFAVGVLLAAAGLFIMYYGFSIDNNGIVSGNYITLSYVLISISELFVSAIGLSMIG
IYCDSKTIGFAMEAWYISSSMANSITGLLNQVVALPKDGFSALESANMYKTYFFDTSLSVMLIGILVLILAYFLIKFMKI
RNIDFV
>Mature_405_residues
GKFTISFCIFSCIFKWLYGPFSDEFFIFAFALVPVCGSLQLGTASAMVSKIYSDNPVHAKSGMTMFYISINLGSLLAYLV
APSLIGYQFGALAVLSVVFIGKLLAIINFSYRYKIYENVVDEIDKKPMTSIAKKVVLGYLAIVYVFIVICYHYPDYANVV
VAVISMFCLLLFLLRTIFFLKDDVRIKQIVGLILIVVAVVFFVIYNQMESTLVMAAKNNSDLLMFGFKVNAASYQIVNPI
LIIFGGMLLIRIYPMFPRFYIPYQFAVGVLLAAAGLFIMYYGFSIDNNGIVSGNYITLSYVLISISELFVSAIGLSMIGI
YCDSKTIGFAMEAWYISSSMANSITGLLNQVVALPKDGFSALESANMYKTYFFDTSLSVMLIGILVLILAYFLIKFMKIR
NIDFV

Specific function: Proton-dependent permease that transports di- and tripeptides [H]

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787922, Length=372, Percent_Identity=27.1505376344086, Blast_Score=147, Evalue=9e-37,
Organism=Escherichia coli, GI1789911, Length=384, Percent_Identity=27.34375, Blast_Score=133, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 45346; Mature: 45215

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKFTISFCIFSCIFKWLYGPFSDEFFIFAFALVPVCGSLQLGTASAMVSKIYSDNPVHA
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
KSGMTMFYISINLGSLLAYLVAPSLIGYQFGALAVLSVVFIGKLLAIINFSYRYKIYENV
CCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDEIDKKPMTSIAKKVVLGYLAIVYVFIVICYHYPDYANVVVAVISMFCLLLFLLRTIFF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKDDVRIKQIVGLILIVVAVVFFVIYNQMESTLVMAAKNNSDLLMFGFKVNAASYQIVNP
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEEECCCCHHHHHH
ILIIFGGMLLIRIYPMFPRFYIPYQFAVGVLLAAAGLFIMYYGFSIDNNGIVSGNYITLS
HHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHCEEECCCCEEECCHHHHH
YVLISISELFVSAIGLSMIGIYCDSKTIGFAMEAWYISSSMANSITGLLNQVVALPKDGF
HHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SALESANMYKTYFFDTSLSVMLIGILVLILAYFLIKFMKIRNIDFV
HHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GKFTISFCIFSCIFKWLYGPFSDEFFIFAFALVPVCGSLQLGTASAMVSKIYSDNPVHA
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
KSGMTMFYISINLGSLLAYLVAPSLIGYQFGALAVLSVVFIGKLLAIINFSYRYKIYENV
CCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDEIDKKPMTSIAKKVVLGYLAIVYVFIVICYHYPDYANVVVAVISMFCLLLFLLRTIFF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKDDVRIKQIVGLILIVVAVVFFVIYNQMESTLVMAAKNNSDLLMFGFKVNAASYQIVNP
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEEECCCCHHHHHH
ILIIFGGMLLIRIYPMFPRFYIPYQFAVGVLLAAAGLFIMYYGFSIDNNGIVSGNYITLS
HHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHCEEECCCCEEECCHHHHH
YVLISISELFVSAIGLSMIGIYCDSKTIGFAMEAWYISSSMANSITGLLNQVVALPKDGF
HHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SALESANMYKTYFFDTSLSVMLIGILVLILAYFLIKFMKIRNIDFV
HHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]