| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is ygfY [C]
Identifier: 89256174
GI number: 89256174
Start: 788919
End: 789206
Strand: Direct
Name: ygfY [C]
Synonym: FTL_0804
Alternate gene names: 89256174
Gene position: 788919-789206 (Clockwise)
Preceding gene: 89256172
Following gene: 89256175
Centisome position: 41.61
GC content: 27.78
Gene sequence:
>288_bases ATGCTAATAAAAAATAATGATCTTATATTTAATTCAGTTGATAAGATAAAGTACTCTGCGCGCAGAGGTATGCTAGAGCT TGATATAATTTTAGCGCCATATTTAAATAATTGTTATATGCATGAAGATCTTGCTAATAAAAAGCTTTTTGTTGAGTTTT TGACTAGTGAAGATAGTGATATGTTTGATTGGCTTTTTAAGGGAGTTACTCCGCCACAAAGATATCAACAACTTATAGAC AAAATTATCAAAGAAAAGAAAAAATTTAATCAAACTAAATTAAAGTAG
Upstream 100 bases:
>100_bases TTAAAAGAGTATTTTTTGAAATAATTTATATAACTATATTGGTTGTCTTAAGCGTATAGTATAAACTAGTGTAATCCATA TATTTATATTTCTATTAAAT
Downstream 100 bases:
>100_bases CTAAAAGGTGTGTTATATGAATGACTTACTAAATCACTCAGGAGAATATCCTATTTCTAAAGAAATAATGAATATATATA AATATTGGCTTATCGATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MLIKNNDLIFNSVDKIKYSARRGMLELDIILAPYLNNCYMHEDLANKKLFVEFLTSEDSDMFDWLFKGVTPPQRYQQLID KIIKEKKKFNQTKLK
Sequences:
>Translated_95_residues MLIKNNDLIFNSVDKIKYSARRGMLELDIILAPYLNNCYMHEDLANKKLFVEFLTSEDSDMFDWLFKGVTPPQRYQQLID KIIKEKKKFNQTKLK >Mature_95_residues MLIKNNDLIFNSVDKIKYSARRGMLELDIILAPYLNNCYMHEDLANKKLFVEFLTSEDSDMFDWLFKGVTPPQRYQQLID KIIKEKKKFNQTKLK
Specific function: Unknown
COG id: COG2938
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0350 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005631 [H]
Pfam domain/function: PF03937 DUF339 [H]
EC number: NA
Molecular weight: Translated: 11348; Mature: 11348
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIKNNDLIFNSVDKIKYSARRGMLELDIILAPYLNNCYMHEDLANKKLFVEFLTSEDSD CCCCCCCEEECCHHHHHHHHHCCCEEEEHHHCCHHCCCEECHHHCCHHHHHHEECCCCCH MFDWLFKGVTPPQRYQQLIDKIIKEKKKFNQTKLK HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLIKNNDLIFNSVDKIKYSARRGMLELDIILAPYLNNCYMHEDLANKKLFVEFLTSEDSD CCCCCCCEEECCHHHHHHHHHCCCEEEEHHHCCHHCCCEECHHHCCHHHHHHEECCCCCH MFDWLFKGVTPPQRYQQLIDKIIKEKKKFNQTKLK HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA