| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is aatA [H]
Identifier: 89256162
GI number: 89256162
Start: 774948
End: 776141
Strand: Direct
Name: aatA [H]
Synonym: FTL_0789
Alternate gene names: 89256162
Gene position: 774948-776141 (Clockwise)
Preceding gene: 89256161
Following gene: 89256163
Centisome position: 40.87
GC content: 35.68
Gene sequence:
>1194_bases ATGGCATCGCTTAACAAAAAGATTCAAAATGTTTCGACTTCACCAACTAATGCTATGGCGGCATTAGCAAAGCAAATCAA AGATCAAGGAAATGATGTAATCTCTCTTGCTATCGGAGAACCTGGATTTAGTACCCCAGATATTATCAAAGCTGCTGGTA TCGAAGCAATAAATAAAGATATTACTAAATATACAAATGTCGATGGTCTTAAAGAACTGCGTGAGGCTATAGTAGCTCGT TACAAGCGTGAATATGGTATTGAGTTTGCTGCAGATCAAGTCTGTGTTACCTCTGGGGCTAAGCATAGTTTGCATAATAT TTTTAACTGTATTTTAGAAGCAGGTGATGAGGCGATTTTCTTTGCACCGTATTGGGTATCATATCCAGATATGATAGCAC TTACAGGAGCAAAACCAGTAGTTGTCGAAACTAAGTTTGAGAATAACTTTGAGATAGATGTTACAGACTTAGAAAAACAT ATTACAGCAAAAACTAAAGCTGTGATTATCAACTCACCTAATAATCCTACCGGTTTGATCTACTCTAAAAAATGTATCGA AGATTTAGCAAATTTACTTAGAAAGTATCCAAATATTTGGATTATTGGTGATGATATTTATGACCAACTTTACTTTAAGG ATAGAGTTACATTGATAACTGAAGTAGCACCTGATTTAGCTGATAGATATGTGATCGCTAGTGGTGTGTCAAAAAACTTT GCGATGACTGGTTGGCGTGTGGGTTTTACAATAGCGCCAAAGCTTTTAAATGATGCACTGAAAAAATTCCAGTCACAATC TGCTACTTGTGCTTGCTCGATATCACAATATGCTGCAATTACTGCTATGAATATGCCAGCACAAGATTTACAGTATTTTG TTGAATCTTACAAGCAAAAAGCACAATTCATTACTAAGTATCTAGAAGCTATGCCATATATTGATGTAAAGAGTGCTGAA GGTACTTTTTATCTTTTTCCAGATCTTAGAAAATTACTTGAGCATACTAATTTTAGTACTGATGTCGAGCTATGTAACGC ACTACTTAGAGAAGAGTATGTAGCGATGATGCCTGGTGTGGCATTTGGTTTATCAGGTTTTGCTAGGATAAGTTGTGCTA ATGAAATGCCAGAGCTTGAAGAGGCTATGACTAGAGTAGCCAGATTTATTAATAAGCATGTTTCAACAAAGTAA
Upstream 100 bases:
>100_bases GCCGTTAGTGGAATCTGATTCGTATAGTTATGTAAATAATTACACTTGCATTGAAATTAGGCAAAATGAATTTAAAGTAG AAAAGTTATAAGGAACAAAA
Downstream 100 bases:
>100_bases TACATTCTCGTTGCTTACTATGTAAGCTATAAATTTATTAAATACAAAAAATATTTTCGACACTAAATTAGATAGCTGCT ACAATCTATAATTATTTCTC
Product: aspartate aminotransferase
Products: NA
Alternate protein names: AspAT; Transaminase A [H]
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MASLNKKIQNVSTSPTNAMAALAKQIKDQGNDVISLAIGEPGFSTPDIIKAAGIEAINKDITKYTNVDGLKELREAIVAR YKREYGIEFAADQVCVTSGAKHSLHNIFNCILEAGDEAIFFAPYWVSYPDMIALTGAKPVVVETKFENNFEIDVTDLEKH ITAKTKAVIINSPNNPTGLIYSKKCIEDLANLLRKYPNIWIIGDDIYDQLYFKDRVTLITEVAPDLADRYVIASGVSKNF AMTGWRVGFTIAPKLLNDALKKFQSQSATCACSISQYAAITAMNMPAQDLQYFVESYKQKAQFITKYLEAMPYIDVKSAE GTFYLFPDLRKLLEHTNFSTDVELCNALLREEYVAMMPGVAFGLSGFARISCANEMPELEEAMTRVARFINKHVSTK
Sequences:
>Translated_397_residues MASLNKKIQNVSTSPTNAMAALAKQIKDQGNDVISLAIGEPGFSTPDIIKAAGIEAINKDITKYTNVDGLKELREAIVAR YKREYGIEFAADQVCVTSGAKHSLHNIFNCILEAGDEAIFFAPYWVSYPDMIALTGAKPVVVETKFENNFEIDVTDLEKH ITAKTKAVIINSPNNPTGLIYSKKCIEDLANLLRKYPNIWIIGDDIYDQLYFKDRVTLITEVAPDLADRYVIASGVSKNF AMTGWRVGFTIAPKLLNDALKKFQSQSATCACSISQYAAITAMNMPAQDLQYFVESYKQKAQFITKYLEAMPYIDVKSAE GTFYLFPDLRKLLEHTNFSTDVELCNALLREEYVAMMPGVAFGLSGFARISCANEMPELEEAMTRVARFINKHVSTK >Mature_396_residues ASLNKKIQNVSTSPTNAMAALAKQIKDQGNDVISLAIGEPGFSTPDIIKAAGIEAINKDITKYTNVDGLKELREAIVARY KREYGIEFAADQVCVTSGAKHSLHNIFNCILEAGDEAIFFAPYWVSYPDMIALTGAKPVVVETKFENNFEIDVTDLEKHI TAKTKAVIINSPNNPTGLIYSKKCIEDLANLLRKYPNIWIIGDDIYDQLYFKDRVTLITEVAPDLADRYVIASGVSKNFA MTGWRVGFTIAPKLLNDALKKFQSQSATCACSISQYAAITAMNMPAQDLQYFVESYKQKAQFITKYLEAMPYIDVKSAEG TFYLFPDLRKLLEHTNFSTDVELCNALLREEYVAMMPGVAFGLSGFARISCANEMPELEEAMTRVARFINKHVSTK
Specific function: Unknown
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI56713256, Length=355, Percent_Identity=25.9154929577465, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI56713254, Length=355, Percent_Identity=25.9154929577465, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI95147551, Length=319, Percent_Identity=24.4514106583072, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI169881279, Length=319, Percent_Identity=24.4514106583072, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI4507369, Length=400, Percent_Identity=25.25, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI169881281, Length=203, Percent_Identity=23.6453201970443, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI19263340, Length=355, Percent_Identity=22.2535211267606, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI215599424, Length=355, Percent_Identity=22.2535211267606, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1786816, Length=378, Percent_Identity=26.7195767195767, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1788627, Length=412, Percent_Identity=24.2718446601942, Blast_Score=126, Evalue=3e-30, Organism=Escherichia coli, GI1788722, Length=367, Percent_Identity=27.2479564032698, Blast_Score=111, Evalue=9e-26, Organism=Escherichia coli, GI1787710, Length=337, Percent_Identity=24.9258160237389, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17567663, Length=387, Percent_Identity=26.6149870801034, Blast_Score=124, Evalue=9e-29, Organism=Caenorhabditis elegans, GI17567369, Length=364, Percent_Identity=26.3736263736264, Blast_Score=114, Evalue=7e-26, Organism=Caenorhabditis elegans, GI71994476, Length=326, Percent_Identity=26.6871165644172, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI71994472, Length=326, Percent_Identity=26.6871165644172, Blast_Score=107, Evalue=9e-24, Organism=Caenorhabditis elegans, GI71981209, Length=375, Percent_Identity=21.8666666666667, Blast_Score=64, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6322401, Length=368, Percent_Identity=30.1630434782609, Blast_Score=145, Evalue=2e-35, Organism=Drosophila melanogaster, GI28573069, Length=360, Percent_Identity=25.2777777777778, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI24646114, Length=360, Percent_Identity=25.2777777777778, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI28573067, Length=360, Percent_Identity=25.2777777777778, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI28573065, Length=360, Percent_Identity=25.2777777777778, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI18859735, Length=387, Percent_Identity=24.031007751938, Blast_Score=89, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.1 [H]
Molecular weight: Translated: 44197; Mature: 44066
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLNKKIQNVSTSPTNAMAALAKQIKDQGNDVISLAIGEPGFSTPDIIKAAGIEAINKD CCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCHHHHHHH ITKYTNVDGLKELREAIVARYKREYGIEFAADQVCVTSGAKHSLHNIFNCILEAGDEAIF HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCEEE FAPYWVSYPDMIALTGAKPVVVETKFENNFEIDVTDLEKHITAKTKAVIINSPNNPTGLI EEEHHCCCCCEEEECCCCCEEEEEECCCCCEEEHHHHHHHHHCCEEEEEEECCCCCCEEE YSKKCIEDLANLLRKYPNIWIIGDDIYDQLYFKDRVTLITEVAPDLADRYVIASGVSKNF ECHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCC AMTGWRVGFTIAPKLLNDALKKFQSQSATCACSISQYAAITAMNMPAQDLQYFVESYKQK EECCEEECCEECHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHH AQFITKYLEAMPYIDVKSAEGTFYLFPDLRKLLEHTNFSTDVELCNALLREEYVAMMPGV HHHHHHHHHHCCCCEEECCCCCEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCH AFGLSGFARISCANEMPELEEAMTRVARFINKHVSTK HHHHCCHHEEECHHCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASLNKKIQNVSTSPTNAMAALAKQIKDQGNDVISLAIGEPGFSTPDIIKAAGIEAINKD CCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCHHHHHHH ITKYTNVDGLKELREAIVARYKREYGIEFAADQVCVTSGAKHSLHNIFNCILEAGDEAIF HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCEEE FAPYWVSYPDMIALTGAKPVVVETKFENNFEIDVTDLEKHITAKTKAVIINSPNNPTGLI EEEHHCCCCCEEEECCCCCEEEEEECCCCCEEEHHHHHHHHHCCEEEEEEECCCCCCEEE YSKKCIEDLANLLRKYPNIWIIGDDIYDQLYFKDRVTLITEVAPDLADRYVIASGVSKNF ECHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCC AMTGWRVGFTIAPKLLNDALKKFQSQSATCACSISQYAAITAMNMPAQDLQYFVESYKQK EECCEEECCEECHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHH AQFITKYLEAMPYIDVKSAEGTFYLFPDLRKLLEHTNFSTDVELCNALLREEYVAMMPGV HHHHHHHHHHCCCCEEECCCCCEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCH AFGLSGFARISCANEMPELEEAMTRVARFINKHVSTK HHHHCCHHEEECHHCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA