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The map label for this gene is visC [H]

Identifier: 89256116

GI number: 89256116

Start: 716447

End: 717682

Strand: Direct

Name: visC [H]

Synonym: FTL_0727

Alternate gene names: 89256116

Gene position: 716447-717682 (Clockwise)

Preceding gene: 89256115

Following gene: 89256117

Centisome position: 37.79

GC content: 33.66

Gene sequence:

>1236_bases
ATGAGCGTTAGAAATATTCAAAAAGATGCTGTGATTGTCGGTGGTGGTATGGTAGGCTTAAGCCTTGCTCTAGCATTGCA
CCAAAATGGTTTGCAGGTTGCGCTTGTTGAGGCAAAAGAGATTAATTATAAGTCTTTGAGTGCTGATAGAGTTGAAACTA
GAGTTAGTGCTATAAACCATACCTCGAAAAGTTTTTTACAACGATTAGGTGTGTGGCATAGTATCAAAAATAAGCGTATA
TCTCCATATTATCAAATGAGAGTTTGGGATGATATTCCTAGTGAGAGTATAAATATTACAGCTGAAGAAATAGCTGAGCA
TAGTTTAGGCTGTATTGTTGAAAATGATGTAATAGTTGAAGCGCTACTAGAGAAGATCAGAGATACAGGTATCGAGATCT
TTGCTAATCAAAAAATACATAAAATTCAAAGAAATGGTAATACTGAAAAGCTCTTTCTACAGGCAATCATTCCGGACTCT
TGCTCTGATGGTTCTAGTCAGAATAGTGATGACAAGTATTTATCAATTGAAACTAGTCTAATAATTGGTGCAGATGGTGC
TAACTCTTTTATTCGCGACTATTTTAATTTTGAAACCAAAGTTAAACCATATAAACATACTGCAATAGTTGCAACAATTA
AGCTTGAAAGAAATCACCTGCAAACAGCATATCAACGTTTTTATGATAAAGGTGTATTGGCATTTTTACCCTTAGAAAAT
TCAAACAAAGCTTCAATAGTTTGGTCTGTAAAGAGTGATTATGCTAATTTTCTGATGAGTTTAACAGATGAGAAATTTGA
GCTAGAACTTACTAAGGCAATTGATAATAGTTTTGGTAGTCTTAATTTACTATCAAAAAGATTTAGTTTTGAGCTAATAG
AGCGTCATGCTAAAAGTTATATACAAAATAATGTAGTATTGGTAGGTGATGCAGCTCATACAATTCACCCATTAGCAGGG
CAAGGGGTAAATATAGGTTTTAAAGATGCTATTGCATTGACTGAAATTTTGACTGAGGCTTTTACAAAAGGTCGCTTGAT
TGGTCATATTTCAACATTAGATAAATATCAGCGTGAGCGTAAGCTTGATAATACTAAGATGCTAGCTTTGATGAAGACAT
TTAAAGAAGTCTTTGCTAGTGATAACCAATATCTCAAAAACGTGCGCAGGGCAGGATTTGAGTTTGTTGATAAAAATAGA
ATTGTTAAAAGTATAGTTGTGAAGCAAGCTTTATAA

Upstream 100 bases:

>100_bases
CATCTGTTACAAAGAAGTAAGTTAGCTAAAAAAGTTTTATCAAGAGTTATGATGGGCAAGCTTAGCAAAGGTTCAACTCT
GATGAGAAAGGTGGTCGAGG

Downstream 100 bases:

>100_bases
TCTCAAGAGAAATGAAGCAGTATGGAAAACGAAATATTAGACATAAAAGAGCTATTCTTAGAATTTGATAAGCATGATGG
TTTAGAAGAGATTGTTAAAA

Product: monooxygenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSVRNIQKDAVIVGGGMVGLSLALALHQNGLQVALVEAKEINYKSLSADRVETRVSAINHTSKSFLQRLGVWHSIKNKRI
SPYYQMRVWDDIPSESINITAEEIAEHSLGCIVENDVIVEALLEKIRDTGIEIFANQKIHKIQRNGNTEKLFLQAIIPDS
CSDGSSQNSDDKYLSIETSLIIGADGANSFIRDYFNFETKVKPYKHTAIVATIKLERNHLQTAYQRFYDKGVLAFLPLEN
SNKASIVWSVKSDYANFLMSLTDEKFELELTKAIDNSFGSLNLLSKRFSFELIERHAKSYIQNNVVLVGDAAHTIHPLAG
QGVNIGFKDAIALTEILTEAFTKGRLIGHISTLDKYQRERKLDNTKMLALMKTFKEVFASDNQYLKNVRRAGFEFVDKNR
IVKSIVVKQAL

Sequences:

>Translated_411_residues
MSVRNIQKDAVIVGGGMVGLSLALALHQNGLQVALVEAKEINYKSLSADRVETRVSAINHTSKSFLQRLGVWHSIKNKRI
SPYYQMRVWDDIPSESINITAEEIAEHSLGCIVENDVIVEALLEKIRDTGIEIFANQKIHKIQRNGNTEKLFLQAIIPDS
CSDGSSQNSDDKYLSIETSLIIGADGANSFIRDYFNFETKVKPYKHTAIVATIKLERNHLQTAYQRFYDKGVLAFLPLEN
SNKASIVWSVKSDYANFLMSLTDEKFELELTKAIDNSFGSLNLLSKRFSFELIERHAKSYIQNNVVLVGDAAHTIHPLAG
QGVNIGFKDAIALTEILTEAFTKGRLIGHISTLDKYQRERKLDNTKMLALMKTFKEVFASDNQYLKNVRRAGFEFVDKNR
IVKSIVVKQAL
>Mature_410_residues
SVRNIQKDAVIVGGGMVGLSLALALHQNGLQVALVEAKEINYKSLSADRVETRVSAINHTSKSFLQRLGVWHSIKNKRIS
PYYQMRVWDDIPSESINITAEEIAEHSLGCIVENDVIVEALLEKIRDTGIEIFANQKIHKIQRNGNTEKLFLQAIIPDSC
SDGSSQNSDDKYLSIETSLIIGADGANSFIRDYFNFETKVKPYKHTAIVATIKLERNHLQTAYQRFYDKGVLAFLPLENS
NKASIVWSVKSDYANFLMSLTDEKFELELTKAIDNSFGSLNLLSKRFSFELIERHAKSYIQNNVVLVGDAAHTIHPLAGQ
GVNIGFKDAIALTEILTEAFTKGRLIGHISTLDKYQRERKLDNTKMLALMKTFKEVFASDNQYLKNVRRAGFEFVDKNRI
VKSIVVKQAL

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=414, Percent_Identity=29.7101449275362, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI32967307, Length=344, Percent_Identity=30.8139534883721, Blast_Score=136, Evalue=4e-32,
Organism=Escherichia coli, GI1789273, Length=404, Percent_Identity=37.8712871287129, Blast_Score=253, Evalue=2e-68,
Organism=Escherichia coli, GI1786883, Length=408, Percent_Identity=31.1274509803922, Blast_Score=194, Evalue=6e-51,
Organism=Escherichia coli, GI1789274, Length=373, Percent_Identity=28.4182305630027, Blast_Score=154, Evalue=9e-39,
Organism=Caenorhabditis elegans, GI25146631, Length=448, Percent_Identity=28.125, Blast_Score=147, Evalue=8e-36,
Organism=Saccharomyces cerevisiae, GI6321694, Length=462, Percent_Identity=24.8917748917749, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI19920760, Length=435, Percent_Identity=28.735632183908, Blast_Score=161, Evalue=7e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 46276; Mature: 46144

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRNIQKDAVIVGGGMVGLSLALALHQNGLQVALVEAKEINYKSLSADRVETRVSAINH
CCCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH
TSKSFLQRLGVWHSIKNKRISPYYQMRVWDDIPSESINITAEEIAEHSLGCIVENDVIVE
HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEHHHHHHHHCCEEEECHHHHH
ALLEKIRDTGIEIFANQKIHKIQRNGNTEKLFLQAIIPDSCSDGSSQNSDDKYLSIETSL
HHHHHHHHCCEEEEECCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEE
IIGADGANSFIRDYFNFETKVKPYKHTAIVATIKLERNHLQTAYQRFYDKGVLAFLPLEN
EEECCCCHHHHHHHHCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHCCCCEEEEECCC
SNKASIVWSVKSDYANFLMSLTDEKFELELTKAIDNSFGSLNLLSKRFSFELIERHAKSY
CCCEEEEEEEHHHHHHHHHHHCCCHHEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
IQNNVVLVGDAAHTIHPLAGQGVNIGFKDAIALTEILTEAFTKGRLIGHISTLDKYQRER
HHCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH
KLDNTKMLALMKTFKEVFASDNQYLKNVRRAGFEFVDKNRIVKSIVVKQAL
HCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVRNIQKDAVIVGGGMVGLSLALALHQNGLQVALVEAKEINYKSLSADRVETRVSAINH
CCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH
TSKSFLQRLGVWHSIKNKRISPYYQMRVWDDIPSESINITAEEIAEHSLGCIVENDVIVE
HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEHHHHHHHHCCEEEECHHHHH
ALLEKIRDTGIEIFANQKIHKIQRNGNTEKLFLQAIIPDSCSDGSSQNSDDKYLSIETSL
HHHHHHHHCCEEEEECCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEE
IIGADGANSFIRDYFNFETKVKPYKHTAIVATIKLERNHLQTAYQRFYDKGVLAFLPLEN
EEECCCCHHHHHHHHCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHCCCCEEEEECCC
SNKASIVWSVKSDYANFLMSLTDEKFELELTKAIDNSFGSLNLLSKRFSFELIERHAKSY
CCCEEEEEEEHHHHHHHHHHHCCCHHEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
IQNNVVLVGDAAHTIHPLAGQGVNIGFKDAIALTEILTEAFTKGRLIGHISTLDKYQRER
HHCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH
KLDNTKMLALMKTFKEVFASDNQYLKNVRRAGFEFVDKNRIVKSIVVKQAL
HCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]