Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256096
Identifier: 89256096
GI number: 89256096
Start: 697051
End: 697941
Strand: Reverse
Name: 89256096
Synonym: FTL_0707
Alternate gene names: NA
Gene position: 697941-697051 (Counterclockwise)
Preceding gene: 89256097
Following gene: 89256094
Centisome position: 36.81
GC content: 28.73
Gene sequence:
>891_bases ATGAATAAAATACCTATAGTTTTTACTTTTGATAAAAATATTATTTTAGGTGGCGCAGTCACGATCAAGAGCTTAATAGA CCATGCTAACCCAGATACTTGTTATGATATTTACGTATATCATCCGAATATTAATAAAAAGTCAATTAGTACATTTAATA GCATGATTGAAAAAACTAAACATAGTATTTCATTTCATAATGTAGATGAATCAATTTTTAAAGATGTACCTATTGATACT CGTAGAGGGTGGATAATAACATTCTATCGACTATTAATACCAAAACTTTTGCCTCAATATGATAAAGTCATATATTCTGA TGTAGACGTGCTATTTCAGTCAGATATGAGTGAAGTATATAATACTGACTTAACTAGTTATGAGTGGGCTGGTGTTATCG CAGAAAAGCATCAACAAAATATGGTTCAGCATAAATATTTTAAGGAAAATAATAATTCTTATATATACTGGCCAGGTTTT ATGGTGATGAATACAAAACTAATGAGAGAAAATAATTTTATAAGCCGTTGCTTTGATACTATGCATGAGTTTAACACAAG ACTAAAGTTTCGAGACTTGGATGTTCTAAATCTAACCTGTCGCAAAATTAAATCGCTACCATTTAAATATGTAACACTAC AAAGTATATATTATCTAAATACTATACAAGAGGCTCCAGAATATATCTTTTTAAAGGAAATTTATTCGGATAATGAGTTG TTAGATGCTAAAAATAATCCTGCTATAATACATTACGCTGGCAGTCCTGGTAAACCATGGAGGATGAAACGACCATATAA AAATTATCTAGAGTATATTTCAAAAATACCTAAAGAACTTAGAAAGTATACTTTTAGAGATATAAAAAAGAAATTACTTA GTAAGTACTAA
Upstream 100 bases:
>100_bases GAATATAAACAAATTCAACAAAATTTAAAAGACTATACTAATCAGTTATATCTAAATTCAAAAATTAACTTACAAAGATT AATCAAAGGATAAACCACAA
Downstream 100 bases:
>100_bases ATAATCGATCTAGCTTAGTAATTCCCTACCCTTGTTTGATCTTTAATTTTGCAAAAAATATAGCTAAAAGTGTCGAGAAT AATATAACTAGAATTTGAAC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase; Lipopolysaccharide Biosynthesis Glycosyltransferase; Glycosyltransferase; Glycosyl Transferase GT8 Family Protein; Lipopolysaccharide Biosynthesis Protein; Glucosyl Transferase; Bifunctional Glycosyl Transferase Family Protein; Family 8 Glycosyl Transferase; Lipopolysaccharide 1 2-Glucosyltransferase; General Stress Protein A; Lps Biosynthesis Protein; Glucosyltransferase
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MNKIPIVFTFDKNIILGGAVTIKSLIDHANPDTCYDIYVYHPNINKKSISTFNSMIEKTKHSISFHNVDESIFKDVPIDT RRGWIITFYRLLIPKLLPQYDKVIYSDVDVLFQSDMSEVYNTDLTSYEWAGVIAEKHQQNMVQHKYFKENNNSYIYWPGF MVMNTKLMRENNFISRCFDTMHEFNTRLKFRDLDVLNLTCRKIKSLPFKYVTLQSIYYLNTIQEAPEYIFLKEIYSDNEL LDAKNNPAIIHYAGSPGKPWRMKRPYKNYLEYISKIPKELRKYTFRDIKKKLLSKY
Sequences:
>Translated_296_residues MNKIPIVFTFDKNIILGGAVTIKSLIDHANPDTCYDIYVYHPNINKKSISTFNSMIEKTKHSISFHNVDESIFKDVPIDT RRGWIITFYRLLIPKLLPQYDKVIYSDVDVLFQSDMSEVYNTDLTSYEWAGVIAEKHQQNMVQHKYFKENNNSYIYWPGF MVMNTKLMRENNFISRCFDTMHEFNTRLKFRDLDVLNLTCRKIKSLPFKYVTLQSIYYLNTIQEAPEYIFLKEIYSDNEL LDAKNNPAIIHYAGSPGKPWRMKRPYKNYLEYISKIPKELRKYTFRDIKKKLLSKY >Mature_296_residues MNKIPIVFTFDKNIILGGAVTIKSLIDHANPDTCYDIYVYHPNINKKSISTFNSMIEKTKHSISFHNVDESIFKDVPIDT RRGWIITFYRLLIPKLLPQYDKVIYSDVDVLFQSDMSEVYNTDLTSYEWAGVIAEKHQQNMVQHKYFKENNNSYIYWPGF MVMNTKLMRENNFISRCFDTMHEFNTRLKFRDLDVLNLTCRKIKSLPFKYVTLQSIYYLNTIQEAPEYIFLKEIYSDNEL LDAKNNPAIIHYAGSPGKPWRMKRPYKNYLEYISKIPKELRKYTFRDIKKKLLSKY
Specific function: Unknown
COG id: COG1442
COG function: function code M; Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35286; Mature: 35286
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIPIVFTFDKNIILGGAVTIKSLIDHANPDTCYDIYVYHPNINKKSISTFNSMIEKTK CCCCCEEEEECCCEEECHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH HSISFHNVDESIFKDVPIDTRRGWIITFYRLLIPKLLPQYDKVIYSDVDVLFQSDMSEVY HCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH NTDLTSYEWAGVIAEKHQQNMVQHKYFKENNNSYIYWPGFMVMNTKLMRENNFISRCFDT CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEHHHHHCCCHHHHHHHH MHEFNTRLKFRDLDVLNLTCRKIKSLPFKYVTLQSIYYLNTIQEAPEYIFLKEIYSDNEL HHHHHCCCEEECCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCHHEEHHHHHCCCCE LDAKNNPAIIHYAGSPGKPWRMKRPYKNYLEYISKIPKELRKYTFRDIKKKLLSKY ECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKIPIVFTFDKNIILGGAVTIKSLIDHANPDTCYDIYVYHPNINKKSISTFNSMIEKTK CCCCCEEEEECCCEEECHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH HSISFHNVDESIFKDVPIDTRRGWIITFYRLLIPKLLPQYDKVIYSDVDVLFQSDMSEVY HCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH NTDLTSYEWAGVIAEKHQQNMVQHKYFKENNNSYIYWPGFMVMNTKLMRENNFISRCFDT CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEHHHHHCCCHHHHHHHH MHEFNTRLKFRDLDVLNLTCRKIKSLPFKYVTLQSIYYLNTIQEAPEYIFLKEIYSDNEL HHHHHCCCEEECCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCHHEEHHHHHCCCCE LDAKNNPAIIHYAGSPGKPWRMKRPYKNYLEYISKIPKELRKYTFRDIKKKLLSKY ECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA