Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is bax [H]
Identifier: 89256087
GI number: 89256087
Start: 685918
End: 686754
Strand: Reverse
Name: bax [H]
Synonym: FTL_0698
Alternate gene names: 89256087
Gene position: 686754-685918 (Counterclockwise)
Preceding gene: 89256088
Following gene: 89256086
Centisome position: 36.22
GC content: 29.63
Gene sequence:
>837_bases ATGAGGATTTTGAGGAAGATTACTATAACTATTACGAGTATGACTAATAATAGATCATTATTAAAATATTTTTTTGTCTT ACTAATATTATTTATATCAGCGGCTATTTTATCTACAAATGAAGGTACGAGGCATACTAAATCAAATTATTTTTTAGAAT CTAGAACCCCTAAAATAACAAAAAAACCTGATTTTTCTGAGATCAAAAATTTCAAAGAAAGAAAAGACGCTTTTATAAAA TATATGTTAGCAGCAATTAAGATCGCTAATAAAGAAATATGCTTACAACAGCAGCAAATTCAAAAACTTAAAAATGCCTT AGACAAAAAAGGTTCATTAAATTCTCAACAAGATAAAAAACTTAGTGCTTATCTTGAATACTATAAAATTAAAACAAATC ACAGTCCCGCTGAGGAGTTAGATTACCTAAATATAAAAGCAGGCATGATCCCAACAAGCTTTGTTCTTGCTCAAGCGGCA CTAGAAAGTGGTTGGGGAACTTCAAGGTTTGCCAAAGACTATAATAATTATTTTGGACTACACTGTTTCTATACTGGATG TGGTGTTAAAGCACAGGCTTCTGATACTTATCTTGAAATATTTAATAACGCCGCTGAAAGTGTTCTAGGCTATTATCATA GACTTAATACAGGTTCAAAATTTGTCGATTTTAGGATAACTAGAGATAAAATAATTAATCAACAATTACCTCCAAAAACT CTACTTGATACTCTAGAGAATTATTCTGAACTTGATGGTAGTGAGTATAAAGATAGACTTATCTCAGTAACTCAACATAA TAACCTAAGGCAATATGATTCAATTAAATATTGCTAA
Upstream 100 bases:
>100_bases ATCCATCCAACAACCGCAAAGATGGTTAAATTTAAAAGCAAACTTCCTGAAGATATGCTAAATTTAAAAGCACAGCTAGA GCAAACAGTTGAAATGCTTG
Downstream 100 bases:
>100_bases TACTTGACTAGCAGTTGGTATTAAAACTGTTTTTCTAGTAAAATTAATTTAGGGTAATTGTATGTAAGAAATAAATGGAA ATAAATATTGATCAAAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MRILRKITITITSMTNNRSLLKYFFVLLILFISAAILSTNEGTRHTKSNYFLESRTPKITKKPDFSEIKNFKERKDAFIK YMLAAIKIANKEICLQQQQIQKLKNALDKKGSLNSQQDKKLSAYLEYYKIKTNHSPAEELDYLNIKAGMIPTSFVLAQAA LESGWGTSRFAKDYNNYFGLHCFYTGCGVKAQASDTYLEIFNNAAESVLGYYHRLNTGSKFVDFRITRDKIINQQLPPKT LLDTLENYSELDGSEYKDRLISVTQHNNLRQYDSIKYC
Sequences:
>Translated_278_residues MRILRKITITITSMTNNRSLLKYFFVLLILFISAAILSTNEGTRHTKSNYFLESRTPKITKKPDFSEIKNFKERKDAFIK YMLAAIKIANKEICLQQQQIQKLKNALDKKGSLNSQQDKKLSAYLEYYKIKTNHSPAEELDYLNIKAGMIPTSFVLAQAA LESGWGTSRFAKDYNNYFGLHCFYTGCGVKAQASDTYLEIFNNAAESVLGYYHRLNTGSKFVDFRITRDKIINQQLPPKT LLDTLENYSELDGSEYKDRLISVTQHNNLRQYDSIKYC >Mature_278_residues MRILRKITITITSMTNNRSLLKYFFVLLILFISAAILSTNEGTRHTKSNYFLESRTPKITKKPDFSEIKNFKERKDAFIK YMLAAIKIANKEICLQQQQIQKLKNALDKKGSLNSQQDKKLSAYLEYYKIKTNHSPAEELDYLNIKAGMIPTSFVLAQAA LESGWGTSRFAKDYNNYFGLHCFYTGCGVKAQASDTYLEIFNNAAESVLGYYHRLNTGSKFVDFRITRDKIINQQLPPKT LLDTLENYSELDGSEYKDRLISVTQHNNLRQYDSIKYC
Specific function: Unknown
COG id: COG2992
COG function: function code R; Uncharacterized FlgJ-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994948, Length=263, Percent_Identity=25.4752851711027, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002901 [H]
Pfam domain/function: PF01832 Glucosaminidase [H]
EC number: NA
Molecular weight: Translated: 32094; Mature: 32094
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILRKITITITSMTNNRSLLKYFFVLLILFISAAILSTNEGTRHTKSNYFLESRTPKIT CCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC KKPDFSEIKNFKERKDAFIKYMLAAIKIANKEICLQQQQIQKLKNALDKKGSLNSQQDKK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LSAYLEYYKIKTNHSPAEELDYLNIKAGMIPTSFVLAQAALESGWGTSRFAKDYNNYFGL HHHHHHHHHEECCCCCHHHHCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCEE HCFYTGCGVKAQASDTYLEIFNNAAESVLGYYHRLNTGSKFVDFRITRDKIINQQLPPKT EEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCCHHH LLDTLENYSELDGSEYKDRLISVTQHNNLRQYDSIKYC HHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHCCCCCCC >Mature Secondary Structure MRILRKITITITSMTNNRSLLKYFFVLLILFISAAILSTNEGTRHTKSNYFLESRTPKIT CCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC KKPDFSEIKNFKERKDAFIKYMLAAIKIANKEICLQQQQIQKLKNALDKKGSLNSQQDKK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LSAYLEYYKIKTNHSPAEELDYLNIKAGMIPTSFVLAQAALESGWGTSRFAKDYNNYFGL HHHHHHHHHEECCCCCHHHHCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCEE HCFYTGCGVKAQASDTYLEIFNNAAESVLGYYHRLNTGSKFVDFRITRDKIINQQLPPKT EEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCCHHH LLDTLENYSELDGSEYKDRLISVTQHNNLRQYDSIKYC HHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503; 1544897 [H]