| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is 89256073
Identifier: 89256073
GI number: 89256073
Start: 671099
End: 671521
Strand: Reverse
Name: 89256073
Synonym: FTL_0684
Alternate gene names: NA
Gene position: 671521-671099 (Counterclockwise)
Preceding gene: 89256074
Following gene: 89256071
Centisome position: 35.42
GC content: 29.55
Gene sequence:
>423_bases ATGAAAAACTTACTACTATTATTAGCTTTAGTTTCAATGCTTACTTCTTGTGCTTATATTGAAGGTTATAATAAACCTCA AGAAGAACTATATATAAATATTACATCCCCTCATACTAAAGATATAAACTTTAATGAAAAGGGAGAATTACCTAAAGATA TAAAAGACCAAAACTATTATGATGTCGAAGTTTCTGGATCAGCACTACAAAATTGTGATGTAATTGACTATGGTGACGTT AAAATCAAACGCTCAGGGATGAATAAAATATTTATTGGTAATGCTCGTGACTGGGACATTGTTAGAATAGATTGTCGTCA AGGTATAGGCAACGGAAAAACTGGTGAAAAACATGATTTAGAAATTAAAGTATTTTCTGATGAAAAAACTTATCATACAA AAACACAAGTAGAACACCAATAA
Upstream 100 bases:
>100_bases TACTTAAGTGATTTTCTTCTACAAAAACAAACATAGATATTGATTAGTTGTTTTCTTGCAGTAAAATAATCAAAAAATAA CCACCTATTAAAGTCTAAAA
Downstream 100 bases:
>100_bases TTTGTAAATAAAAGATCTAGTTTTGAATAAGCATAACATGATAGAAAAAATAAATTAATATCTAATTTAAGAATTATAAG TAGTAGAGTTTTCGTATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKNLLLLLALVSMLTSCAYIEGYNKPQEELYINITSPHTKDINFNEKGELPKDIKDQNYYDVEVSGSALQNCDVIDYGDV KIKRSGMNKIFIGNARDWDIVRIDCRQGIGNGKTGEKHDLEIKVFSDEKTYHTKTQVEHQ
Sequences:
>Translated_140_residues MKNLLLLLALVSMLTSCAYIEGYNKPQEELYINITSPHTKDINFNEKGELPKDIKDQNYYDVEVSGSALQNCDVIDYGDV KIKRSGMNKIFIGNARDWDIVRIDCRQGIGNGKTGEKHDLEIKVFSDEKTYHTKTQVEHQ >Mature_140_residues MKNLLLLLALVSMLTSCAYIEGYNKPQEELYINITSPHTKDINFNEKGELPKDIKDQNYYDVEVSGSALQNCDVIDYGDV KIKRSGMNKIFIGNARDWDIVRIDCRQGIGNGKTGEKHDLEIKVFSDEKTYHTKTQVEHQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16013; Mature: 16013
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLLLLLALVSMLTSCAYIEGYNKPQEELYINITSPHTKDINFNEKGELPKDIKDQNYY CCHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE DVEVSGSALQNCDVIDYGDVKIKRSGMNKIFIGNARDWDIVRIDCRQGIGNGKTGEKHDL EEEECCCCCCCCCEEECCCEEEEECCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCEE EIKVFSDEKTYHTKTQVEHQ EEEEECCCCCEECCEEECCC >Mature Secondary Structure MKNLLLLLALVSMLTSCAYIEGYNKPQEELYINITSPHTKDINFNEKGELPKDIKDQNYY CCHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE DVEVSGSALQNCDVIDYGDVKIKRSGMNKIFIGNARDWDIVRIDCRQGIGNGKTGEKHDL EEEECCCCCCCCCEEECCCEEEEECCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCEE EIKVFSDEKTYHTKTQVEHQ EEEEECCCCCEECCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA