| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is 89256043
Identifier: 89256043
GI number: 89256043
Start: 635603
End: 636139
Strand: Reverse
Name: 89256043
Synonym: FTL_0652
Alternate gene names: NA
Gene position: 636139-635603 (Counterclockwise)
Preceding gene: 89256049
Following gene: 89256042
Centisome position: 33.55
GC content: 31.28
Gene sequence:
>537_bases ATGAAACAAGATATTCTAGACTTTTTTGACTCTTTAGCTATCATTGGTATCAGTATAATCTTGGCTATGGCTTTTTATTA TCAGCTATTTCTTCAAGAATTGCCTTGTGCACTATGTGTATTTCAAAGAATGGCTTTAAGCTTACTAACTTTTGGACTGT TACTAAACCTAACTCACGGCAATAATTATAAGCATTATCTGCTTATAATTTTAGTTGCATTATTAAATGCTGCTATGGCA ATTACTCAGATACTTTTGCATATTGTGCCAGGCACTGGAAATTATGGTGAGGCGGTATTTTCATTACATATGTATACTTG GAATTTCATCGTAAGTATTATTTTTATCTTGTACGCTGCTATCTGTGGCTTAATCACCCCAAATGAAAATAAGAAGAAAA AATTAAGTATCTTAGCAAAACTAGCTATAATCCTAATCTTAATCCTAACAGTAGCAAATACATTAAATGTATTTGTTGAA TGTGGTCCACACTTATGTCCATCTGATCCAAATAGTTATTGGCTATTTAATCATTAA
Upstream 100 bases:
>100_bases ATAGCCAAAATACTATTTTTCATATCGCTAGGATTACTGTTAGTGGTATTTATACCTCACACAATCAGATACATAAATAT TCAGTTATAGGGTGATCAAT
Downstream 100 bases:
>100_bases AGGAATCATCTCTGTAAACGATGATTTTTTATAACTTAAGCTGCTTTGTCGTTTTACTGAATACTTTCAAGCACAATCTA AAAGTTTTATGTCAAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKQDILDFFDSLAIIGISIILAMAFYYQLFLQELPCALCVFQRMALSLLTFGLLLNLTHGNNYKHYLLIILVALLNAAMA ITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILYAAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVE CGPHLCPSDPNSYWLFNH
Sequences:
>Translated_178_residues MKQDILDFFDSLAIIGISIILAMAFYYQLFLQELPCALCVFQRMALSLLTFGLLLNLTHGNNYKHYLLIILVALLNAAMA ITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILYAAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVE CGPHLCPSDPNSYWLFNH >Mature_178_residues MKQDILDFFDSLAIIGISIILAMAFYYQLFLQELPCALCVFQRMALSLLTFGLLLNLTHGNNYKHYLLIILVALLNAAMA ITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILYAAICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVE CGPHLCPSDPNSYWLFNH
Specific function: Unknown
COG id: COG1495
COG function: function code O; Disulfide bond formation protein DsbB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19977; Mature: 19977
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQDILDFFDSLAIIGISIILAMAFYYQLFLQELPCALCVFQRMALSLLTFGLLLNLTHG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC NNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILYAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFNH HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCC >Mature Secondary Structure MKQDILDFFDSLAIIGISIILAMAFYYQLFLQELPCALCVFQRMALSLLTFGLLLNLTHG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC NNYKHYLLIILVALLNAAMAITQILLHIVPGTGNYGEAVFSLHMYTWNFIVSIIFILYAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ICGLITPNENKKKKLSILAKLAIILILILTVANTLNVFVECGPHLCPSDPNSYWLFNH HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA