Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256014
Identifier: 89256014
GI number: 89256014
Start: 607646
End: 608086
Strand: Reverse
Name: 89256014
Synonym: FTL_0617
Alternate gene names: NA
Gene position: 608086-607646 (Counterclockwise)
Preceding gene: 89256016
Following gene: 89256011
Centisome position: 32.07
GC content: 29.02
Gene sequence:
>441_bases ATGGAACTTAAATTAGAAAATAAACAAGAAATTATTGATCAATTAAATAAAATCTTAGAACTCGAAATGTCTGGAATTGT GCGTTATACTCATTATTCTTTAATGATTATAGGTCATAATAGAATTCCTATAGTTAGTTGGATGCAATCTCAAGCAAGTG AAAGTTTAACTCATGCTACTGCAGCAGGTGAAATGATAACTCACTTTGGTGAGCATCCATCTTTAAAAATAGCAGATTTA AACGAAACTTATCAGCATAATATCAATGATATATTAATCGAAAGTCTAGAACATGAAAAAAAAGCTGTTTCAGCATACTA TGAACTTCTAAAACTTGTAAATGGCAAATCAATAATATTAGAAGAATATGCAAGAAAACTCATAGTTGAAGAAGAAACGC ACATTGGTGAAGTAGAAAAAATGTTAAGAAAACCTGCATAA
Upstream 100 bases:
>100_bases TTAAATTTTCTTTTGTATGCTAACTTGATTGCTAATATGAATTATACTAGTTAGTATGTTGATTATAATGATTAGAGTTT TAAATAATGGAGGTAACAAT
Downstream 100 bases:
>100_bases AGGCTATTATCCTCGATGAGTTTTTCTTCTTATATACAAGCTTATTTATAGTTTTGTATCAATTCTTGGATTTACTAGAA TGCGCTATCGAGATATTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: Bacterioferritin; Ferritin And Dps; Ferritin-Like Domain Subfamily; Dps Family Ferritin
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MELKLENKQEIIDQLNKILELEMSGIVRYTHYSLMIIGHNRIPIVSWMQSQASESLTHATAAGEMITHFGEHPSLKIADL NETYQHNINDILIESLEHEKKAVSAYYELLKLVNGKSIILEEYARKLIVEEETHIGEVEKMLRKPA
Sequences:
>Translated_146_residues MELKLENKQEIIDQLNKILELEMSGIVRYTHYSLMIIGHNRIPIVSWMQSQASESLTHATAAGEMITHFGEHPSLKIADL NETYQHNINDILIESLEHEKKAVSAYYELLKLVNGKSIILEEYARKLIVEEETHIGEVEKMLRKPA >Mature_146_residues MELKLENKQEIIDQLNKILELEMSGIVRYTHYSLMIIGHNRIPIVSWMQSQASESLTHATAAGEMITHFGEHPSLKIADL NETYQHNINDILIESLEHEKKAVSAYYELLKLVNGKSIILEEYARKLIVEEETHIGEVEKMLRKPA
Specific function: Unknown
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16810; Mature: 16810
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKLENKQEIIDQLNKILELEMSGIVRYTHYSLMIIGHNRIPIVSWMQSQASESLTHAT CCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH AAGEMITHFGEHPSLKIADLNETYQHNINDILIESLEHEKKAVSAYYELLKLVNGKSIIL HHHHHHHHCCCCCCEEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH EEYARKLIVEEETHIGEVEKMLRKPA HHHHHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure MELKLENKQEIIDQLNKILELEMSGIVRYTHYSLMIIGHNRIPIVSWMQSQASESLTHAT CCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH AAGEMITHFGEHPSLKIADLNETYQHNINDILIESLEHEKKAVSAYYELLKLVNGKSIIL HHHHHHHHCCCCCCEEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH EEYARKLIVEEETHIGEVEKMLRKPA HHHHHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA