| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is capM [H]
Identifier: 89255997
GI number: 89255997
Start: 586003
End: 587103
Strand: Direct
Name: capM [H]
Synonym: FTL_0599
Alternate gene names: 89255997
Gene position: 586003-587103 (Clockwise)
Preceding gene: 89255996
Following gene: 89255998
Centisome position: 30.91
GC content: 26.25
Gene sequence:
>1101_bases TTGAAAAGGTTTGTACATTTAATAATAAACCTTAACCAAGGTGGTGCTGAAACAATGCTTTATAAACTTTGCAAATCTAT GGATAAGTCAATATATCATATTACGGTTATATCACTTATGGGTAGGGGAGTATTTGCAAATAAGTTAGAAGCTTATGGTG TTAAAGTTTATACATTAAATTTAAATAAATTTAATATACTATTTGTATTGTTTAAATATATTAAGATTATTAGAAGAATA AAGCCTGATGTTATTCATGCTTGGATGTATCATGCAAATGTAATTTCTATATTATGCAAGCCTTTTTACAGAAAGACTAA ATATATAAATAGTATAAGAATGGGATTGGAGAATTATGATGGTCATAAGAATCTTACAAAGTTTATGATAAAGTTGAATG CAAAATTTTCTAAGTTCTCAGATTTAACATTAAATAATTCAAAGAAATCATTAGAAGATCATCAAAATATAGGTTTTAAA AACCAATGCTTTATAGCAAATGGTTTTGATAAAGATGTTTTTAAACCGAGCTTTTTAAAGTATGAAAAATTTCGTTTAAA TAATGATTTAGATGATAATGTTAAAATTATAGGTATCATAGCAAGAAATCATGCTGATAAAAATATTTCTCGTTTCTTAC AAATAGCTAATTTATTGTTAAAAAGTAATCCTAGTTTACGGTTTTTAATTGCTGGAAGAGAGTGTTCGAAAATAGATATA GGTAGTTATCTAGATAACAAAAGTAATGTAAATAAGTTTTTTGTATTTGAATCTGTGGATTCTAGTGAATACTTACCAGT ATTAGATTTATATTTGTCTACATCAAAAGTTGAAGGTTTTCCAAATATACTTGCAGAAGCCATGCTATGTGAAGTTCCTA TTGTTGCTTCTAATGTTGGAGATTGTAAAGATATACTTAATGGATACGGTGAAGTTTTTGAGCTTAGTCAAGGTAATAAA GAAATAATAGAAAAGATTATGAAAGTTTTAGAAACAACGGTAGTCATGAAAAAGCGCATGAGAGAATATATAATAAATAA TTTTAGTATAGAAGCTATTTTGGAAAAACACGAAAAACTTTATTATGAGGGCAGTGTCTAA
Upstream 100 bases:
>100_bases CAAAAATAATTTTTTTGACAGTAGGATTATTTACTAAATTAACCATTATATTATTTATTTTTTCTCTTAAAGAAAACAGC TTTACAACTAGGAGTGTGAT
Downstream 100 bases:
>100_bases TGTGTGGAGTAGTAGGCTTTTACTCATTTAATAAAGAAGAAGGTTTTGACTCAATAATTAATCAATCATTGCTTTCTATA AAGCATAGAGGGTCGGATGA
Product: glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MKRFVHLIINLNQGGAETMLYKLCKSMDKSIYHITVISLMGRGVFANKLEAYGVKVYTLNLNKFNILFVLFKYIKIIRRI KPDVIHAWMYHANVISILCKPFYRKTKYINSIRMGLENYDGHKNLTKFMIKLNAKFSKFSDLTLNNSKKSLEDHQNIGFK NQCFIANGFDKDVFKPSFLKYEKFRLNNDLDDNVKIIGIIARNHADKNISRFLQIANLLLKSNPSLRFLIAGRECSKIDI GSYLDNKSNVNKFFVFESVDSSEYLPVLDLYLSTSKVEGFPNILAEAMLCEVPIVASNVGDCKDILNGYGEVFELSQGNK EIIEKIMKVLETTVVMKKRMREYIINNFSIEAILEKHEKLYYEGSV
Sequences:
>Translated_366_residues MKRFVHLIINLNQGGAETMLYKLCKSMDKSIYHITVISLMGRGVFANKLEAYGVKVYTLNLNKFNILFVLFKYIKIIRRI KPDVIHAWMYHANVISILCKPFYRKTKYINSIRMGLENYDGHKNLTKFMIKLNAKFSKFSDLTLNNSKKSLEDHQNIGFK NQCFIANGFDKDVFKPSFLKYEKFRLNNDLDDNVKIIGIIARNHADKNISRFLQIANLLLKSNPSLRFLIAGRECSKIDI GSYLDNKSNVNKFFVFESVDSSEYLPVLDLYLSTSKVEGFPNILAEAMLCEVPIVASNVGDCKDILNGYGEVFELSQGNK EIIEKIMKVLETTVVMKKRMREYIINNFSIEAILEKHEKLYYEGSV >Mature_366_residues MKRFVHLIINLNQGGAETMLYKLCKSMDKSIYHITVISLMGRGVFANKLEAYGVKVYTLNLNKFNILFVLFKYIKIIRRI KPDVIHAWMYHANVISILCKPFYRKTKYINSIRMGLENYDGHKNLTKFMIKLNAKFSKFSDLTLNNSKKSLEDHQNIGFK NQCFIANGFDKDVFKPSFLKYEKFRLNNDLDDNVKIIGIIARNHADKNISRFLQIANLLLKSNPSLRFLIAGRECSKIDI GSYLDNKSNVNKFFVFESVDSSEYLPVLDLYLSTSKVEGFPNILAEAMLCEVPIVASNVGDCKDILNGYGEVFELSQGNK EIIEKIMKVLETTVVMKKRMREYIINNFSIEAILEKHEKLYYEGSV
Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 42267; Mature: 42267
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFVHLIINLNQGGAETMLYKLCKSMDKSIYHITVISLMGRGVFANKLEAYGVKVYTLN CCCEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCEEEEEEEE LNKFNILFVLFKYIKIIRRIKPDVIHAWMYHANVISILCKPFYRKTKYINSIRMGLENYD CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GHKNLTKFMIKLNAKFSKFSDLTLNNSKKSLEDHQNIGFKNQCFIANGFDKDVFKPSFLK CHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHH YEKFRLNNDLDDNVKIIGIIARNHADKNISRFLQIANLLLKSNPSLRFLIAGRECSKIDI HHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEC GSYLDNKSNVNKFFVFESVDSSEYLPVLDLYLSTSKVEGFPNILAEAMLCEVPIVASNVG CHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCC DCKDILNGYGEVFELSQGNKEIIEKIMKVLETTVVMKKRMREYIINNFSIEAILEKHEKL HHHHHHHCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH YYEGSV EECCCC >Mature Secondary Structure MKRFVHLIINLNQGGAETMLYKLCKSMDKSIYHITVISLMGRGVFANKLEAYGVKVYTLN CCCEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCEEEEEEEE LNKFNILFVLFKYIKIIRRIKPDVIHAWMYHANVISILCKPFYRKTKYINSIRMGLENYD CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GHKNLTKFMIKLNAKFSKFSDLTLNNSKKSLEDHQNIGFKNQCFIANGFDKDVFKPSFLK CHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHH YEKFRLNNDLDDNVKIIGIIARNHADKNISRFLQIANLLLKSNPSLRFLIAGRECSKIDI HHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEC GSYLDNKSNVNKFFVFESVDSSEYLPVLDLYLSTSKVEGFPNILAEAMLCEVPIVASNVG CHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCC DCKDILNGYGEVFELSQGNKEIIEKIMKVLETTVVMKKRMREYIINNFSIEAILEKHEKL HHHHHHHCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH YYEGSV EECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7961465 [H]