| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is icd2 [H]
Identifier: 89255986
GI number: 89255986
Start: 569500
End: 571716
Strand: Direct
Name: icd2 [H]
Synonym: FTL_0588
Alternate gene names: 89255986
Gene position: 569500-571716 (Clockwise)
Preceding gene: 89255985
Following gene: 89255987
Centisome position: 30.04
GC content: 35.45
Gene sequence:
>2217_bases ATGCATAAAATATTTTATACATTTACAGATGAAGCACCAGCATTGGCAACAGGATCATTTTTACCAATAGTTGAGAGCTT TACTAAAGTTGCAGATATAGAGTTAGAAACGAAAGATATTTCTCTATCAGCGCGGATATTGGCTAACTTTAATGATTACC TTACTGCAGAGCAAAAGTGTTCTGATGATTTAGCGATACTTAGAGAGCTTGCAAAAACTCCAGATGCTAATATTATAAAA CTTCCAAATATTAGTGCATCAATTCCTCAGCTTACAGCAGCTATTAAAGAACTTCAGTCAAAGGGTTATAAAATACCTGA TTATCCATATGAGCCAAAAGATGATAAAGAGCAAGAAATTAAAGCACGCTATGCAAAAGTTTTAGGGAGTGCCGTAAACC CTGTTTTAAGAGAGGGTAACTCTGATCGTAGAGTTGCTGATGCTGTTAAGAAGTACGCCGAGAAACATCCACATTCTATG GGTGAATGGACAAAAGACTCTAAATCTCATGTGGCAAGTATGAGTGCTGATGACTTTTATGCTAATGAGAAATCTTATAT TGTACCAAAAGCAACTAAGGTTAAAATAGTCCATATAGATACAAAAGACACTCAAACTGTGCTTAAAGATAATCTTGCGC TAGAAGAAAAAGAAATTATTGATGCTACTAAGATATCTATAAAAGCTTTAAGAGAATTCTACAAAAATGAAATAGCTAAG GCTAAAAAAGAAGGTACGCTATTATCCCTCCACCTAAAAGCTACGATGATGAAAGTTTCTGATCCAATATTGTTTGGTCA TGCGGTAGAGATCTTTTTCGAAGATATTTTCAAAAAGTATGCTAAAGAGTTTAAAGAGTTAGGTGTAAATCCTCGTAATG GTTGGGGTGATGCAGTAGAGAAAATCAAGCAACTTCCACAAGAACTTCAAGATAAAATTAATGCCGATATTGAAAAAGTA TTTGCAAAGCAGCCTGATATTGCGATGGTTAATTCTGACAAGGGTATTACAAACCTAAATGTTCCGAGTGATGTAATTAT TGATGCTTCTATGCCTGCGGCTATTCGTTCATCTGGTAAGATGTGGAACAAAGATGGCAAACTTCAAGATATGAAAGCGA TGATTCCTGATAGATGTTATGCTGGAGTGTATGCGGCAACTATCGATTTCTGTAAAGAAAATGGCGCTTTTGATGTGGCT ACTATGGGTGATGTTTCTAACGTTGGTCTGATGGCGAAAAAAGCAGAAGAGTATGGTTCTCATGATAAGACATTTGAAAT CCAAGCTGATGGTAAAGTTGAAGTTATTGATGCTGAAGGTAATGTAATATTTGAGCATCAAGTCGAAAAAGGCGATATTT GGCGTGCTTGTCAAACTAAAGATATCGCAGTTAAAGACTGGGTTAAACTAGTTGTTAATAGAGCTAAAATTACTCAAAAT CCTGCGATTTTTTGGTTGGATTCAAAAAGAGCTCATGATAGAAACCTAATTGCTAAAGTGAATGAGTATTTAACTCATCA TGATACTACTGGCTTAGATATTCAAATATTATCTCCAGTAGAAGCTACGAAATACTCTCTAAAAAGAATGAAAGAGGGTA AAAATACAATTTCTGTGACAGGTAACGTTTTAAGAGATTACTTGACAGATTTATTTCCTATTTTAGAGCTTGGTACTTCT GCTAAGATGCTTTCTATAGTTCCGCTATTAGCTGGAGGTGGATTATTTGAAACTGGGGCTGGTGGTTCTGCGCCTAAACA CGTTGAGCAACTTATTGAGGAAAATCACCTAAGATGGGATTCTTTAGGTGAGTTTTTGGCTTTAGGAGCATCATTAGAAG ACTTAGCTATCAAAACTAGAGATGCTAAAATCAAGGTTTTAGCTGAGACATTATCACAGGCAAACAAAGATTTCTTGGAT AATGATAAATCGCCGCGTCGTAAAGTTGGTGAGCTTGATACTCGAGGAAGTCATTTCTATTTGGCTTACTATTGGGTTAA GGCTCTAGCTGAGCAAACAGGTAATGCTGAATTAAAAGCTAAATTTGAGCCAATTTATATTGAACTAAAAGCTAATAAGG ATAAAATTGTCAAAGAGCTTAATGATGCTCAAGGCAAAAAAGTTGATGTTGGTGGCTACTATCATATGGATAAAGTAAAA TTAGATGCAGTGATGAGGCCGAGTAAAACTTTTAATACAATTTTGGCGCAAATATAA
Upstream 100 bases:
>100_bases AGTAGTTGCAAGGTCTGATGAGAAAATACAACAGATATTAAATACCTACTAGTTTTATGTTATTATTTGAACAGTGAAAT TCTATCTACAGGAGATTTTT
Downstream 100 bases:
>100_bases GGAAAGAGAGATAATGGCTGAAATTAAAAATGATGAATATATAGAAATTAGTTTAATTAAAATTTTAGTTGGATTATTTA GTAATATAAAGACATTTCTT
Product: isocitrate dehydrogenase
Products: NA
Alternate protein names: IDH-II; IDP-2; NADP+-specific ICDH 2; Oxalosuccinate decarboxylase 2 [H]
Number of amino acids: Translated: 738; Mature: 738
Protein sequence:
>738_residues MHKIFYTFTDEAPALATGSFLPIVESFTKVADIELETKDISLSARILANFNDYLTAEQKCSDDLAILRELAKTPDANIIK LPNISASIPQLTAAIKELQSKGYKIPDYPYEPKDDKEQEIKARYAKVLGSAVNPVLREGNSDRRVADAVKKYAEKHPHSM GEWTKDSKSHVASMSADDFYANEKSYIVPKATKVKIVHIDTKDTQTVLKDNLALEEKEIIDATKISIKALREFYKNEIAK AKKEGTLLSLHLKATMMKVSDPILFGHAVEIFFEDIFKKYAKEFKELGVNPRNGWGDAVEKIKQLPQELQDKINADIEKV FAKQPDIAMVNSDKGITNLNVPSDVIIDASMPAAIRSSGKMWNKDGKLQDMKAMIPDRCYAGVYAATIDFCKENGAFDVA TMGDVSNVGLMAKKAEEYGSHDKTFEIQADGKVEVIDAEGNVIFEHQVEKGDIWRACQTKDIAVKDWVKLVVNRAKITQN PAIFWLDSKRAHDRNLIAKVNEYLTHHDTTGLDIQILSPVEATKYSLKRMKEGKNTISVTGNVLRDYLTDLFPILELGTS AKMLSIVPLLAGGGLFETGAGGSAPKHVEQLIEENHLRWDSLGEFLALGASLEDLAIKTRDAKIKVLAETLSQANKDFLD NDKSPRRKVGELDTRGSHFYLAYYWVKALAEQTGNAELKAKFEPIYIELKANKDKIVKELNDAQGKKVDVGGYYHMDKVK LDAVMRPSKTFNTILAQI
Sequences:
>Translated_738_residues MHKIFYTFTDEAPALATGSFLPIVESFTKVADIELETKDISLSARILANFNDYLTAEQKCSDDLAILRELAKTPDANIIK LPNISASIPQLTAAIKELQSKGYKIPDYPYEPKDDKEQEIKARYAKVLGSAVNPVLREGNSDRRVADAVKKYAEKHPHSM GEWTKDSKSHVASMSADDFYANEKSYIVPKATKVKIVHIDTKDTQTVLKDNLALEEKEIIDATKISIKALREFYKNEIAK AKKEGTLLSLHLKATMMKVSDPILFGHAVEIFFEDIFKKYAKEFKELGVNPRNGWGDAVEKIKQLPQELQDKINADIEKV FAKQPDIAMVNSDKGITNLNVPSDVIIDASMPAAIRSSGKMWNKDGKLQDMKAMIPDRCYAGVYAATIDFCKENGAFDVA TMGDVSNVGLMAKKAEEYGSHDKTFEIQADGKVEVIDAEGNVIFEHQVEKGDIWRACQTKDIAVKDWVKLVVNRAKITQN PAIFWLDSKRAHDRNLIAKVNEYLTHHDTTGLDIQILSPVEATKYSLKRMKEGKNTISVTGNVLRDYLTDLFPILELGTS AKMLSIVPLLAGGGLFETGAGGSAPKHVEQLIEENHLRWDSLGEFLALGASLEDLAIKTRDAKIKVLAETLSQANKDFLD NDKSPRRKVGELDTRGSHFYLAYYWVKALAEQTGNAELKAKFEPIYIELKANKDKIVKELNDAQGKKVDVGGYYHMDKVK LDAVMRPSKTFNTILAQI >Mature_738_residues MHKIFYTFTDEAPALATGSFLPIVESFTKVADIELETKDISLSARILANFNDYLTAEQKCSDDLAILRELAKTPDANIIK LPNISASIPQLTAAIKELQSKGYKIPDYPYEPKDDKEQEIKARYAKVLGSAVNPVLREGNSDRRVADAVKKYAEKHPHSM GEWTKDSKSHVASMSADDFYANEKSYIVPKATKVKIVHIDTKDTQTVLKDNLALEEKEIIDATKISIKALREFYKNEIAK AKKEGTLLSLHLKATMMKVSDPILFGHAVEIFFEDIFKKYAKEFKELGVNPRNGWGDAVEKIKQLPQELQDKINADIEKV FAKQPDIAMVNSDKGITNLNVPSDVIIDASMPAAIRSSGKMWNKDGKLQDMKAMIPDRCYAGVYAATIDFCKENGAFDVA TMGDVSNVGLMAKKAEEYGSHDKTFEIQADGKVEVIDAEGNVIFEHQVEKGDIWRACQTKDIAVKDWVKLVVNRAKITQN PAIFWLDSKRAHDRNLIAKVNEYLTHHDTTGLDIQILSPVEATKYSLKRMKEGKNTISVTGNVLRDYLTDLFPILELGTS AKMLSIVPLLAGGGLFETGAGGSAPKHVEQLIEENHLRWDSLGEFLALGASLEDLAIKTRDAKIKVLAETLSQANKDFLD NDKSPRRKVGELDTRGSHFYLAYYWVKALAEQTGNAELKAKFEPIYIELKANKDKIVKELNDAQGKKVDVGGYYHMDKVK LDAVMRPSKTFNTILAQI
Specific function: Unknown
COG id: COG2838
COG function: function code C; Monomeric isocitrate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monomeric-type IDH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001804 - InterPro: IPR004436 [H]
Pfam domain/function: PF03971 IDH [H]
EC number: =1.1.1.42 [H]
Molecular weight: Translated: 82384; Mature: 82384
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKIFYTFTDEAPALATGSFLPIVESFTKVADIELETKDISLSARILANFNDYLTAEQKC CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCEEEHHHHHCCHHHHCCHHHC SDDLAILRELAKTPDANIIKLPNISASIPQLTAAIKELQSKGYKIPDYPYEPKDDKEQEI CHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH KARYAKVLGSAVNPVLREGNSDRRVADAVKKYAEKHPHSMGEWTKDSKSHVASMSADDFY HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHC ANEKSYIVPKATKVKIVHIDTKDTQTVLKDNLALEEKEIIDATKISIKALREFYKNEIAK CCCCCEECCCCCEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKKEGTLLSLHLKATMMKVSDPILFGHAVEIFFEDIFKKYAKEFKELGVNPRNGWGDAVE HHHCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH KIKQLPQELQDKINADIEKVFAKQPDIAMVNSDKGITNLNVPSDVIIDASMPAAIRSSGK HHHHHHHHHHHHHCHHHHHHHHCCCCEEEEECCCCCEECCCCCCEEEECCCCHHHHCCCC MWNKDGKLQDMKAMIPDRCYAGVYAATIDFCKENGAFDVATMGDVSNVGLMAKKAEEYGS CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCC HDKTFEIQADGKVEVIDAEGNVIFEHQVEKGDIWRACQTKDIAVKDWVKLVVNRAKITQN CCCEEEEEECCEEEEEECCCCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCC PAIFWLDSKRAHDRNLIAKVNEYLTHHDTTGLDIQILSPVEATKYSLKRMKEGKNTISVT CEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEC GNVLRDYLTDLFPILELGTSAKMLSIVPLLAGGGLFETGAGGSAPKHVEQLIEENHLRWD HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCHH SLGEFLALGASLEDLAIKTRDAKIKVLAETLSQANKDFLDNDKSPRRKVGELDTRGSHFY HHHHHHHHCCCHHHHEEECCCCHHHHHHHHHHHHCHHHHCCCCCHHHHHCCCCCCCCEEE LAYYWVKALAEQTGNAELKAKFEPIYIELKANKDKIVKELNDAQGKKVDVGGYYHMDKVK HHHHHHHHHHHCCCCCEEEEEECEEEEEEECCHHHHHHHHHHCCCCEEECCCEEEECCEE LDAVMRPSKTFNTILAQI EHHHCCCCHHHHHHHHCC >Mature Secondary Structure MHKIFYTFTDEAPALATGSFLPIVESFTKVADIELETKDISLSARILANFNDYLTAEQKC CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCEEEHHHHHCCHHHHCCHHHC SDDLAILRELAKTPDANIIKLPNISASIPQLTAAIKELQSKGYKIPDYPYEPKDDKEQEI CHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH KARYAKVLGSAVNPVLREGNSDRRVADAVKKYAEKHPHSMGEWTKDSKSHVASMSADDFY HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHC ANEKSYIVPKATKVKIVHIDTKDTQTVLKDNLALEEKEIIDATKISIKALREFYKNEIAK CCCCCEECCCCCEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKKEGTLLSLHLKATMMKVSDPILFGHAVEIFFEDIFKKYAKEFKELGVNPRNGWGDAVE HHHCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH KIKQLPQELQDKINADIEKVFAKQPDIAMVNSDKGITNLNVPSDVIIDASMPAAIRSSGK HHHHHHHHHHHHHCHHHHHHHHCCCCEEEEECCCCCEECCCCCCEEEECCCCHHHHCCCC MWNKDGKLQDMKAMIPDRCYAGVYAATIDFCKENGAFDVATMGDVSNVGLMAKKAEEYGS CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCC HDKTFEIQADGKVEVIDAEGNVIFEHQVEKGDIWRACQTKDIAVKDWVKLVVNRAKITQN CCCEEEEEECCEEEEEECCCCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCC PAIFWLDSKRAHDRNLIAKVNEYLTHHDTTGLDIQILSPVEATKYSLKRMKEGKNTISVT CEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEC GNVLRDYLTDLFPILELGTSAKMLSIVPLLAGGGLFETGAGGSAPKHVEQLIEENHLRWD HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCHH SLGEFLALGASLEDLAIKTRDAKIKVLAETLSQANKDFLDNDKSPRRKVGELDTRGSHFY HHHHHHHHCCCHHHHEEECCCCHHHHHHHHHHHHCHHHHCCCCCHHHHHCCCCCCCCEEE LAYYWVKALAEQTGNAELKAKFEPIYIELKANKDKIVKELNDAQGKKVDVGGYYHMDKVK HHHHHHHHHHHCCCCCEEEEEECEEEEEEECCHHHHHHHHHHCCCCEEECCCEEEECCEE LDAVMRPSKTFNTILAQI EHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226630; 1295895 [H]