Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is 89255971

Identifier: 89255971

GI number: 89255971

Start: 551623

End: 552606

Strand: Direct

Name: 89255971

Synonym: FTL_0573

Alternate gene names: NA

Gene position: 551623-552606 (Clockwise)

Preceding gene: 89255970

Following gene: 89255972

Centisome position: 29.09

GC content: 33.64

Gene sequence:

>984_bases
ATGCAAAAAAGGTTAATTACTTTTTTAGTATCATCTATGTCTTTTATGACAGCTACAGGTGTGGCAGCACAAAATAATTT
AGCTGATACAAACATGATTTCGGGTAGTACAGTTATAAGCTCTGCAAGCTCGATACTTAGTTCAGCTAGTAGCACTTACA
AAGGTGTAGATGAACGTAGTAAACTAAAAATGTTTAGAGTCGCAATATTACCTTTTGATACAAAAGGTGCCAAGATAGAT
GGTGATATTGATCAAGAGCAACTCCAATCAGGCTTAAATGATAGTATTGTTGCTCAAATAACACAGTCTCGCAAATTTAG
AGTGTCAAATCGTGATGTTAATGATGAGAAAGCTTATGAAAGTGAAATTAAGCGTATACTTAACTCTAATACAGATAATG
ATAAGGGTATGCTTAATCAAAAAATAGGTGCAGATTTTATCCTTACTGGAGATATCCTAAATCTAAATATCACTAAAAAC
AAAACTTCATATTATGGTGAAGATTTTACGACACTAAATGTTTCTGCTACAGTGGCATATCGCATGGTAGAGCTAGCGAC
AATGGAGGTTAAATGGTCAAATGTGGTTACTATTGAGGTACCGACAAATATAGCTAATCAATATGCTAATGCTGATGATG
CTAATTATATTCAACTATTGAGCTATTTAGGTAAACAATTAGGTAAAACAATATCAGACCAGGTTATTGGAGCTATATAT
CCTCTTCAAGTCTTGAAAGTTGATGATGGTGAGATTTATTTTAATCAAGGTGGTGATAGAATTATCAAAGGAAGTGTCTA
TGAGGTTCGTCAAGATGGTGGAGTTACATTAGACCCTGCTACTGGACAACATATCGTACTTGATAGTAAGGTTTTAGCAA
AAATAAAAATTACTGATGTTATGCCTAAATATTCTATTGGTATAGTGATTGATGGTAGTTTAGCTAAAGTTCAACCTGGG
TTACGTGCTTATCTAACCAAATAG

Upstream 100 bases:

>100_bases
ACTCAAAATACTGAAAGTGGCCAAAGTTCCCTAAATGGTAAGGTAATTATCAGACAAAGTGATGATAATAAATATCTAAA
TCAATACTAGGGTTTTAAAA

Downstream 100 bases:

>100_bases
TTATTATGAAAACCAAGAGTTATTCACTATTACTGTTATTGTGTGGGGTTATTTCAAGTTGTACTACATTTAGTGGGAGT
CATCCTGATAAGGTTGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MQKRLITFLVSSMSFMTATGVAAQNNLADTNMISGSTVISSASSILSSASSTYKGVDERSKLKMFRVAILPFDTKGAKID
GDIDQEQLQSGLNDSIVAQITQSRKFRVSNRDVNDEKAYESEIKRILNSNTDNDKGMLNQKIGADFILTGDILNLNITKN
KTSYYGEDFTTLNVSATVAYRMVELATMEVKWSNVVTIEVPTNIANQYANADDANYIQLLSYLGKQLGKTISDQVIGAIY
PLQVLKVDDGEIYFNQGGDRIIKGSVYEVRQDGGVTLDPATGQHIVLDSKVLAKIKITDVMPKYSIGIVIDGSLAKVQPG
LRAYLTK

Sequences:

>Translated_327_residues
MQKRLITFLVSSMSFMTATGVAAQNNLADTNMISGSTVISSASSILSSASSTYKGVDERSKLKMFRVAILPFDTKGAKID
GDIDQEQLQSGLNDSIVAQITQSRKFRVSNRDVNDEKAYESEIKRILNSNTDNDKGMLNQKIGADFILTGDILNLNITKN
KTSYYGEDFTTLNVSATVAYRMVELATMEVKWSNVVTIEVPTNIANQYANADDANYIQLLSYLGKQLGKTISDQVIGAIY
PLQVLKVDDGEIYFNQGGDRIIKGSVYEVRQDGGVTLDPATGQHIVLDSKVLAKIKITDVMPKYSIGIVIDGSLAKVQPG
LRAYLTK
>Mature_327_residues
MQKRLITFLVSSMSFMTATGVAAQNNLADTNMISGSTVISSASSILSSASSTYKGVDERSKLKMFRVAILPFDTKGAKID
GDIDQEQLQSGLNDSIVAQITQSRKFRVSNRDVNDEKAYESEIKRILNSNTDNDKGMLNQKIGADFILTGDILNLNITKN
KTSYYGEDFTTLNVSATVAYRMVELATMEVKWSNVVTIEVPTNIANQYANADDANYIQLLSYLGKQLGKTISDQVIGAIY
PLQVLKVDDGEIYFNQGGDRIIKGSVYEVRQDGGVTLDPATGQHIVLDSKVLAKIKITDVMPKYSIGIVIDGSLAKVQPG
LRAYLTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35781; Mature: 35781

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKRLITFLVSSMSFMTATGVAAQNNLADTNMISGSTVISSASSILSSASSTYKGVDERS
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCHHH
KLKMFRVAILPFDTKGAKIDGDIDQEQLQSGLNDSIVAQITQSRKFRVSNRDVNDEKAYE
HEEEEEEEEEEECCCCCEECCCCCHHHHHCCCCHHHHHHHHHCCEEEECCCCCCHHHHHH
SEIKRILNSNTDNDKGMLNQKIGADFILTGDILNLNITKNKTSYYGEDFTTLNVSATVAY
HHHHHHHCCCCCCCCCHHHHHCCCCEEEECCEEEEEEECCCCCCCCCCEEEEEEHHHHHH
RMVELATMEVKWSNVVTIEVPTNIANQYANADDANYIQLLSYLGKQLGKTISDQVIGAIY
HHHHHEEEEEEECCEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCC
PLQVLKVDDGEIYFNQGGDRIIKGSVYEVRQDGGVTLDPATGQHIVLDSKVLAKIKITDV
CEEEEEECCCEEEEECCCCEEEECCEEEEECCCCEEECCCCCCEEEECCCEEEEEEEEEC
MPKYSIGIVIDGSLAKVQPGLRAYLTK
CCCCEEEEEECCCHHHHCCCHHHHCCC
>Mature Secondary Structure
MQKRLITFLVSSMSFMTATGVAAQNNLADTNMISGSTVISSASSILSSASSTYKGVDERS
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCHHH
KLKMFRVAILPFDTKGAKIDGDIDQEQLQSGLNDSIVAQITQSRKFRVSNRDVNDEKAYE
HEEEEEEEEEEECCCCCEECCCCCHHHHHCCCCHHHHHHHHHCCEEEECCCCCCHHHHHH
SEIKRILNSNTDNDKGMLNQKIGADFILTGDILNLNITKNKTSYYGEDFTTLNVSATVAY
HHHHHHHCCCCCCCCCHHHHHCCCCEEEECCEEEEEEECCCCCCCCCCEEEEEEHHHHHH
RMVELATMEVKWSNVVTIEVPTNIANQYANADDANYIQLLSYLGKQLGKTISDQVIGAIY
HHHHHEEEEEEECCEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCC
PLQVLKVDDGEIYFNQGGDRIIKGSVYEVRQDGGVTLDPATGQHIVLDSKVLAKIKITDV
CEEEEEECCCEEEEECCCCEEEECCEEEEECCCCEEECCCCCCEEEECCCEEEEEEEEEC
MPKYSIGIVIDGSLAKVQPGLRAYLTK
CCCCEEEEEECCCHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA