| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89255971
Identifier: 89255971
GI number: 89255971
Start: 551623
End: 552606
Strand: Direct
Name: 89255971
Synonym: FTL_0573
Alternate gene names: NA
Gene position: 551623-552606 (Clockwise)
Preceding gene: 89255970
Following gene: 89255972
Centisome position: 29.09
GC content: 33.64
Gene sequence:
>984_bases ATGCAAAAAAGGTTAATTACTTTTTTAGTATCATCTATGTCTTTTATGACAGCTACAGGTGTGGCAGCACAAAATAATTT AGCTGATACAAACATGATTTCGGGTAGTACAGTTATAAGCTCTGCAAGCTCGATACTTAGTTCAGCTAGTAGCACTTACA AAGGTGTAGATGAACGTAGTAAACTAAAAATGTTTAGAGTCGCAATATTACCTTTTGATACAAAAGGTGCCAAGATAGAT GGTGATATTGATCAAGAGCAACTCCAATCAGGCTTAAATGATAGTATTGTTGCTCAAATAACACAGTCTCGCAAATTTAG AGTGTCAAATCGTGATGTTAATGATGAGAAAGCTTATGAAAGTGAAATTAAGCGTATACTTAACTCTAATACAGATAATG ATAAGGGTATGCTTAATCAAAAAATAGGTGCAGATTTTATCCTTACTGGAGATATCCTAAATCTAAATATCACTAAAAAC AAAACTTCATATTATGGTGAAGATTTTACGACACTAAATGTTTCTGCTACAGTGGCATATCGCATGGTAGAGCTAGCGAC AATGGAGGTTAAATGGTCAAATGTGGTTACTATTGAGGTACCGACAAATATAGCTAATCAATATGCTAATGCTGATGATG CTAATTATATTCAACTATTGAGCTATTTAGGTAAACAATTAGGTAAAACAATATCAGACCAGGTTATTGGAGCTATATAT CCTCTTCAAGTCTTGAAAGTTGATGATGGTGAGATTTATTTTAATCAAGGTGGTGATAGAATTATCAAAGGAAGTGTCTA TGAGGTTCGTCAAGATGGTGGAGTTACATTAGACCCTGCTACTGGACAACATATCGTACTTGATAGTAAGGTTTTAGCAA AAATAAAAATTACTGATGTTATGCCTAAATATTCTATTGGTATAGTGATTGATGGTAGTTTAGCTAAAGTTCAACCTGGG TTACGTGCTTATCTAACCAAATAG
Upstream 100 bases:
>100_bases ACTCAAAATACTGAAAGTGGCCAAAGTTCCCTAAATGGTAAGGTAATTATCAGACAAAGTGATGATAATAAATATCTAAA TCAATACTAGGGTTTTAAAA
Downstream 100 bases:
>100_bases TTATTATGAAAACCAAGAGTTATTCACTATTACTGTTATTGTGTGGGGTTATTTCAAGTTGTACTACATTTAGTGGGAGT CATCCTGATAAGGTTGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MQKRLITFLVSSMSFMTATGVAAQNNLADTNMISGSTVISSASSILSSASSTYKGVDERSKLKMFRVAILPFDTKGAKID GDIDQEQLQSGLNDSIVAQITQSRKFRVSNRDVNDEKAYESEIKRILNSNTDNDKGMLNQKIGADFILTGDILNLNITKN KTSYYGEDFTTLNVSATVAYRMVELATMEVKWSNVVTIEVPTNIANQYANADDANYIQLLSYLGKQLGKTISDQVIGAIY PLQVLKVDDGEIYFNQGGDRIIKGSVYEVRQDGGVTLDPATGQHIVLDSKVLAKIKITDVMPKYSIGIVIDGSLAKVQPG LRAYLTK
Sequences:
>Translated_327_residues MQKRLITFLVSSMSFMTATGVAAQNNLADTNMISGSTVISSASSILSSASSTYKGVDERSKLKMFRVAILPFDTKGAKID GDIDQEQLQSGLNDSIVAQITQSRKFRVSNRDVNDEKAYESEIKRILNSNTDNDKGMLNQKIGADFILTGDILNLNITKN KTSYYGEDFTTLNVSATVAYRMVELATMEVKWSNVVTIEVPTNIANQYANADDANYIQLLSYLGKQLGKTISDQVIGAIY PLQVLKVDDGEIYFNQGGDRIIKGSVYEVRQDGGVTLDPATGQHIVLDSKVLAKIKITDVMPKYSIGIVIDGSLAKVQPG LRAYLTK >Mature_327_residues MQKRLITFLVSSMSFMTATGVAAQNNLADTNMISGSTVISSASSILSSASSTYKGVDERSKLKMFRVAILPFDTKGAKID GDIDQEQLQSGLNDSIVAQITQSRKFRVSNRDVNDEKAYESEIKRILNSNTDNDKGMLNQKIGADFILTGDILNLNITKN KTSYYGEDFTTLNVSATVAYRMVELATMEVKWSNVVTIEVPTNIANQYANADDANYIQLLSYLGKQLGKTISDQVIGAIY PLQVLKVDDGEIYFNQGGDRIIKGSVYEVRQDGGVTLDPATGQHIVLDSKVLAKIKITDVMPKYSIGIVIDGSLAKVQPG LRAYLTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35781; Mature: 35781
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKRLITFLVSSMSFMTATGVAAQNNLADTNMISGSTVISSASSILSSASSTYKGVDERS CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCHHH KLKMFRVAILPFDTKGAKIDGDIDQEQLQSGLNDSIVAQITQSRKFRVSNRDVNDEKAYE HEEEEEEEEEEECCCCCEECCCCCHHHHHCCCCHHHHHHHHHCCEEEECCCCCCHHHHHH SEIKRILNSNTDNDKGMLNQKIGADFILTGDILNLNITKNKTSYYGEDFTTLNVSATVAY HHHHHHHCCCCCCCCCHHHHHCCCCEEEECCEEEEEEECCCCCCCCCCEEEEEEHHHHHH RMVELATMEVKWSNVVTIEVPTNIANQYANADDANYIQLLSYLGKQLGKTISDQVIGAIY HHHHHEEEEEEECCEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCC PLQVLKVDDGEIYFNQGGDRIIKGSVYEVRQDGGVTLDPATGQHIVLDSKVLAKIKITDV CEEEEEECCCEEEEECCCCEEEECCEEEEECCCCEEECCCCCCEEEECCCEEEEEEEEEC MPKYSIGIVIDGSLAKVQPGLRAYLTK CCCCEEEEEECCCHHHHCCCHHHHCCC >Mature Secondary Structure MQKRLITFLVSSMSFMTATGVAAQNNLADTNMISGSTVISSASSILSSASSTYKGVDERS CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCHHH KLKMFRVAILPFDTKGAKIDGDIDQEQLQSGLNDSIVAQITQSRKFRVSNRDVNDEKAYE HEEEEEEEEEEECCCCCEECCCCCHHHHHCCCCHHHHHHHHHCCEEEECCCCCCHHHHHH SEIKRILNSNTDNDKGMLNQKIGADFILTGDILNLNITKNKTSYYGEDFTTLNVSATVAY HHHHHHHCCCCCCCCCHHHHHCCCCEEEECCEEEEEEECCCCCCCCCCEEEEEEHHHHHH RMVELATMEVKWSNVVTIEVPTNIANQYANADDANYIQLLSYLGKQLGKTISDQVIGAIY HHHHHEEEEEEECCEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCC PLQVLKVDDGEIYFNQGGDRIIKGSVYEVRQDGGVTLDPATGQHIVLDSKVLAKIKITDV CEEEEEECCCEEEEECCCCEEEECCEEEEECCCCEEECCCCCCEEEECCCEEEEEEEEEC MPKYSIGIVIDGSLAKVQPGLRAYLTK CCCCEEEEEECCCHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA